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Selected Publications


PreTSA: computationally efficient modeling of temporal and spatial gene expression patterns.

Journal Article Genome Biol · February 12, 2026 Modeling temporal and spatial gene expression patterns in large-scale single-cell and spatial transcriptomics data is a computationally intensive task. We present PreTSA, a method that offers computational efficiency in modeling these patterns and is appli ... Full text Link to item Cite

Identifying cell-type-specific spatially variable genes with ctSVG.

Journal Article Genome Biol · December 8, 2025 UNLABELLED: Spatially variable genes (SVGs) reveal the molecular and functional heterogeneity of cells across different spatial regions of a tissue. Sample-wide SVGs identified by existing methods largely overlap with cell-type marker genes derived from si ... Full text Open Access Link to item Cite