Journal articleCommun Biol · July 7, 2026
Cell types represent groups of cells with shared anatomical and functional properties. Traditional brain cell type atlases rely on single-cell sequencing, which provides molecular detail but lacks whole-brain, isotropic resolution. Diffusion magnetic reson ...
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Journal articleNat Neurosci · April 2026
Alzheimer's disease has widespread effects on brain structure, function and behavior, but we lack a systematic dissection of its impact across hundreds of forebrain and brainstem regions. Here, using diffusion tensor MRI at 25 µm, we mapped the global cons ...
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Journal articleSci Adv · May 2, 2025
Atlases of the brain are critical resources that make it possible to share data in a common reference frame. Unexpectedly, there is no three-dimensional (3D) stereotaxic atlas of the mouse brain that provides whole brain coverage at macro to single-cell le ...
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Journal articleMed Sci Educ · April 2025
INTRODUCTION: Many studies have examined the role of medical humanities in processing overall academic and emotional experiences, but few have studied the impact of visual art on human body dissection reflection. At the Duke University School of Medicine, ...
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Journal articleLeonardo · April 1, 2025
AbstractThis article illustrates a collaboration-in-formation between a performing artist and a neuroscientist. The authors focus on the early clarification of cross-disciplinary language and their recogniti ...
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Journal articleNeuroimage · August 15, 2024
Brain development is a highly complex process regulated by numerous genes at the molecular and cellular levels. Brain tissue exhibits serial microstructural changes during the development process. High-resolution diffusion magnetic resonance imaging (dMRI) ...
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Journal articleProc Natl Acad Sci U S A · April 25, 2023
We have developed workflows to align 3D magnetic resonance histology (MRH) of the mouse brain with light sheet microscopy (LSM) and 3D delineations of the same specimen. We start with MRH of the brain in the skull with gradient echo and diffusion tensor im ...
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Journal articleNMR Biomed · February 2023
The United States is experiencing a dramatic increase in maternal opioid misuse and, consequently, the number of individuals exposed to opioids in utero. Prenatal opioid exposure has both acute and long-lasting effects on health and wellbeing. Effects on t ...
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Journal articleFront Neurosci · 2023
Information on regional variation in cell numbers and densities in the CNS provides critical insight into structure, function, and the progression of CNS diseases. However, variability can be real or a consequence of methods that do not account for technic ...
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Journal articleJ Undergrad Neurosci Educ · 2022
Students often find neuroanatomy a daunting exercise of rote memorization in a dead language. This workshop was designed to enliven the teaching of neuroanatomy. We recast the topic by extending it to the cellular and sub-cellular levels, animating it by l ...
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Journal articleNeuroimage · November 15, 2021
We describe a multi-contrast, multi-dimensional atlas of the Wistar rat acquired at microscopic spatial resolution using magnetic resonance histology (MRH). Diffusion weighted images, and associated scalar images were acquired of a single specimen with a f ...
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Journal articleNeuroimage · August 15, 2021
Conventional atlases of the human brainstem are limited by the inflexible, sparsely-sampled, two-dimensional nature of histology, or the low spatial resolution of conventional magnetic resonance imaging (MRI). Postmortem high-resolution MRI circumvents the ...
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Journal articleNeuroimage · August 1, 2020
MRI has been widely used to probe the neuroanatomy of the mouse brain, directly correlating MRI findings to histology is still challenging due to the limited spatial resolution and various image contrasts derived from water relaxation or diffusion properti ...
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Journal articleJ Comp Neurol · September 1, 2019
Methods have been developed to allow quantitative connectivity of the whole fixed mouse brain by means of magnetic resonance imaging (MRI). We have translated what we have learned in clinical imaging to the very special domain of the mouse brain. Diffusion ...
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Journal articleBrain Struct Funct · June 2019
Advanced biophysical models like neurite orientation dispersion and density imaging (NODDI) have been developed to estimate the microstructural complexity of voxels enriched in dendrites and axons for both in vivo and ex vivo studies. NODDI metrics derived ...
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Journal articleJ Bioenerg Biomembr · February 2019
The critical period concept has been one of the most transcendent in science, education, and society forming the basis of our fixation on 'quality' of childhood experiences. The neural basis of this process has been revealed in developmental studies of vis ...
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Journal articleNeuroradiol J · April 2018
Purpose The purpose of this study was to compare quantitative diffusion tensor imaging metrics in dogs affected with a model of Krabbe disease to age-matched normal controls. We hypothesized that fractional anisotropy would be decreased and radial diffusiv ...
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Journal articleNeuroradiol J · February 2018
Purpose We investigated fractional anisotropy (FA) and radial diffusivity (RD) in a canine model of mucopolysaccharidosis (MPS). We hypothesized that canines affected with MPS would exhibit decreased FA and increased RD values when compared to unaffected c ...
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Journal articleNeuroradiol J · October 2017
Purpose We compared fractional anisotropy and radial diffusivity measurements between pediatric canines affected with mucopolysaccharidosis I and pediatric control canines. We hypothesized that lower fractional anisotropy and higher radial diffusivity valu ...
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Journal articleNeuroradiol J · August 2017
Purpose We describe a novel technique for measuring diffusion tensor imaging metrics in the canine brain. We hypothesized that a standard method for region of interest placement could be developed that is highly reproducible, with less than 10% difference ...
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Journal articleNeuroradiol J · August 2017
Purpose The purpose of this study was to investigate a novel tensor shape plot analysis technique of diffusion tensor imaging data as a means to assess microstructural differences in brain tissue. We hypothesized that this technique could distinguish white ...
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Journal articleNeuroradiol J · February 2016
The goal of this study was to apply image registration-based automated segmentation methods to measure diffusion tensor imaging (DTI) metrics within the canine brain. Specifically, we hypothesized that this method could measure DTI metrics within the canin ...
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Journal articleNeuroradiol J · December 2015
OBJECTIVE: This study examined the effect of mucopolysaccharidosis (MPS) type 1 on diffusion tensor imaging (DTI) metrics in the canine brain. We hypothesized 1) white matter regions in the MPS brain would show decreased fractional anisotropy (FA) and incr ...
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Journal articlePLoS Comput Biol · November 2015
The architecture of iso-orientation domains in the primary visual cortex (V1) of placental carnivores and primates apparently follows species invariant quantitative laws. Dynamical optimization models assuming that neurons coordinate their stimulus prefere ...
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Journal articleNeuroradiol J · February 2015
The goal of this study was to determine the degree to which ex vivo diffusion tensor imaging (DTI) parameters correlate to one another in white matter regions on very high resolution MR scans. Specifically, we hypothesized that radial diffusivity (RD) and ...
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Journal articleAJR Am J Roentgenol · January 2014
OBJECTIVE: We set out to determine functional white matter (WM) connections passing through the canine corpus callosum; these WM connections would be useful for subsequent studies of canine brains that serve as models for human WM pathway disease. Based on ...
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Journal articleNeuroradiol J · October 2013
This study examined the relationship between histological variables and diffusion tensor imaging (DTI) values in a normal canine brain. We hypothesized that radial diffusivity (RD) would correlate with myelin density and fractional anisotropy (FA) would co ...
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Journal articleJ Neurosci · May 23, 2012
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Visual experience plays a critical role in the development of direction-selective responses in ferret visual cortex. In visually naive animals, presentation of a bidirectional "training" stimulus induces rapid increases in the direction-selective responses ...
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Journal articleScience · April 27, 2012
Meng et al. conjecture that pinwheel density scales with body and brain size. Our data, spanning a 40-fold range of body sizes in Laurasiatheria and Euarchonta, do not support this conclusion. The noncolumnar layout in Glires also appears size-insensitive. ...
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Journal articleNeuroimage · May 15, 2011
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A striking feature of cortical organization is that the encoding of many stimulus features, for example orientation or direction selectivity, is arranged into topographic maps. Functional imaging methods such as optical imaging of intrinsic signals, voltag ...
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Journal articleJ Am Coll Radiol · May 2011
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PURPOSE: Radiation oncologists require a thorough understanding of anatomy, but gross anatomy is not part of the standard residency curriculum. "Oncoanatomy" is an educational program for radiation oncology residents at Duke University that integrates cada ...
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Journal articleScience · November 19, 2010
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The brain's visual cortex processes information concerning form, pattern, and motion within functional maps that reflect the layout of neuronal circuits. We analyzed functional maps of orientation preference in the ferret, tree shrew, and galago--three spe ...
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Journal articlePediatr Neurol · January 2010
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We sought to distinguish patients testing positive for human herpesvirus 6 from those testing negative, based on clinical features and magnetic resonance images. Sixteen immunosuppresed patients were tested by polymerase chain reaction for human herpes vir ...
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Journal articleNeuroimage · June 2009
Aging is associated with significant white matter deterioration and this deterioration is assumed to be at least partly a consequence of myelin degeneration. The present study investigated specific predictions of the myelodegeneration hypothesis using diff ...
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Journal articleJ Cogn Neurosci · February 2009
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Previous research has established that age-related decline occurs in measures of cerebral white matter integrity, but the role of this decline in age-related cognitive changes is not clear. To conclude that white matter integrity has a mediating (causal) c ...
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Journal articleAdvances in Neural Information Processing Systems 22 Proceedings of the 2009 Conference · January 1, 2009
Imaging techniques such as optical imaging of intrinsic signals, 2-photon calcium imaging and voltage sensitive dye imaging can be used to measure the functional organization of visual cortex across different spatial and temporal scales. Here, we present B ...
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Journal articleNature · December 18, 2008
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The onset of vision occurs when neural circuits in the visual cortex are immature, lacking both the full complement of connections and the response selectivity that defines functional maturity. Direction-selective responses are particularly vulnerable to t ...
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Journal articleRadiology · December 2008
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PURPOSE: To test the hypothesis that patterns of signal intensity abnormality in human herpesvirus 6 (HHV6)-positive patients would allow distinction from patients who did not test positive for HHV6 encephalitis. MATERIALS AND METHODS: This retrospective s ...
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Journal articleNeurobiol Aging · July 2008
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Previous research suggests that, in reaction time (RT) measures of episodic memory retrieval, the unique effects of adult age are relatively small compared to the effects aging shares with more elementary abilities such as perceptual speed. Little is known ...
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Journal articleNeuron · October 25, 2007
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Functional maps arise in developing visual cortex as response selectivities become organized into columnar patterns of population activity. Recent studies of developing orientation and direction maps indicate that both are sensitive to visual experience, b ...
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Journal articleAJR Am J Roentgenol · August 2007
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OBJECTIVE: The purpose of this study was to use diffusion-weighted and diffusion tensor imaging to investigate the status of cerebral white matter (WM) at term gestation and the rate of WM maturation throughout the first year of life in healthy infants. MA ...
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Journal articleNeurobiol Aging · March 2007
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We combined measures from event-related functional magnetic resonance imaging (fMRI), diffusion tensor imaging (DTI), and cognitive performance (visual search response time) to test the hypotheses that differences between younger and older adults in top-do ...
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Journal articleAnn N Y Acad Sci · February 2007
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Neuroimaging research suggests that cerebral white matter (WM) integrity, as reflected in fractional anisotropy (FA) via diffusion tensor imaging (DTI), is decreased in older adults, especially in the prefrontal regions of the brain. Behavioral investigati ...
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Journal articleNat Neurosci · May 2006
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Development of the selective response properties that define columns in sensory cortex is thought to begin early in cortical maturation, without the need for experience. We investigated the development of direction selectivity in ferret visual cortex using ...
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Journal articleProg Brain Res · 2006
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Viewed in the plane of the cortical surface, the visual cortex is composed of overlapping functional maps that represent stimulus features such as edge orientation, direction of motion, and spatial frequency. Spatial relationships between these maps are th ...
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Journal articleJ Neurophysiol · October 2005
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Cells in primary visual cortex (V1) of primates and carnivores respond most strongly to a visual stimulus presented to one eye, in a particular visual field location, and at a particular orientation. Each of these stimulus attributes is mapped across the c ...
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Journal articleNeuroimage · March 2004
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Diffusion tensor imaging (DTI) measures the displacement of water molecules across tissue components, thus providing information regarding the microstructure of cerebral white matter. Fractional anisotropy (FA), the degree to which diffusion is directional ...
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Journal articleVis Neurosci · 2004
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Within the visual cortex of several mammalian species, more circuitry is devoted to the representation of vertical and horizontal orientations than oblique orientations. The sensitivity of this representation of orientation preference to visual experience ...
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Journal articleNature · June 26, 2003
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Stimulus features such as edge orientation, motion direction and spatial frequency are thought to be encoded in the primary visual cortex by overlapping feature maps arranged so that the location of neurons activated by a particular combination of stimulus ...
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Journal articleNature · June 28, 2001
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Sensory experience begins when neural circuits in the cerebral cortex are still immature; however, the contribution of experience to cortical maturation remains unclear. In the visual cortex, the selectivity of neurons for oriented stimuli at the time of e ...
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Journal articleVis Neurosci · 2001
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The mammalian visual cortex harbors a number of functional maps that represent distinct attributes of stimuli in the visual environment. How different functional maps are accommodated within the same cortical space, especially in species that show marked i ...
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Journal articleJ Neurosci · August 15, 1999
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In the visual cortex, the representation of central visual space is supplied by matching geniculate inputs that are driven exclusively by one eye or the other. In layer 4 of early visual areas (V1 in primates and V1 and V2 in cat), these inputs form a near ...
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Journal articleProc Natl Acad Sci U S A · March 3, 1998
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We have measured the amount of cortical space activated by differently oriented gratings in 25 adult ferrets by optical imaging of intrinsic signal. On average, 7% more area of the exposed visual cortex was preferentially activated by vertical and horizont ...
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Journal articleCereb Cortex · 1997
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We have studied the morphology of the central sulcus and the cytoarchitecture of the primary sensorimotor cortex in 20 human brains obtained at autopsy. Although the surface appearance of the central sulcus varies greatly from brain to brain (and between h ...
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Journal articleCereb Cortex · 1997
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We have evaluated the lateral symmetry of the human central sulcus, brainstem and spinal cord using quantitative histological and imaging techniques in specimens from 67 autopsy cases. Our purpose was to determine whether the preferred use of the right han ...
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Journal articleTrends Neurosci · November 1996
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Gradually, and without much debate, the idea that the developing nervous system is in some sense darwinian has become one of the canons of neurobiology. In fact, there is little evidence to support this idea. ...
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Journal articleProc Natl Acad Sci U S A · April 16, 1996
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The majority of neurons in the primary visual cortex of primates can be activated by stimulation of either eye; moreover, the monocular receptive fields of such neurons are located in about the same region of visual space. These well-known facts imply that ...
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Journal articleProc Natl Acad Sci U S A · August 30, 1994
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Faced with an unobstructed view, both foveas can be readily aligned with a distant visual target. The minor difference in the view of the two eyes (which arises from slightly different lines of sight) presents no special problem and is, indeed, the basis o ...
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Journal articleProc Natl Acad Sci U S A · May 24, 1994
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Volumetric measurements show that right-handed individuals have larger right hands than left hands. In contrast, the hands of left-handers are much more nearly symmetrical. Based on what is known about trophic interactions between neurons and targets, thes ...
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Journal articleCurr Opin Neurobiol · February 1994
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Present thinking about the role of neural activity in the developing brain is based largely upon observations in the visual system. Attempts to generalize these findings in the somatic sensory system, however, have yielded perplexing results. Unlike the vi ...
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Journal articleJ Comp Neurol · January 15, 1994
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The principle neuronal output of the neostriatum comes from medium spiny neurons that project from the caudate/putamen to the globus pallidus and substantia nigra. Although current evidence generally indicates that gamma-aminobutyric acid (GABA) is the pri ...
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Journal articleJ Neurosci · November 1993
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Limbic status epilepticus was induced in awake, unrestrained rats by electrically stimulating the anterior piriform cortex or the basal amygdaloid nucleus for about 40 min. As described in the preceding article (White and Price, 1993), one of four stable f ...
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Journal articleJ Neurosci · November 1993
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Limbic status epilepticus was induced in awake, unrestrained rats by electrically stimulating the olfactory cortex or the basal amygdaloid nucleus for about 40 min. One of four stable forms of status was induced, which were distinguished on the basis of th ...
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Journal articleJ Neurosci · October 1993
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We have examined relative levels of metabolic and electrical activity across layer IV in the primary somatic sensory cortex (S1) of the rat in relation to regions of differential postnatal cortical growth. Each of several indices used--mitochondrial enzyme ...
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Journal articleJ Comp Neurol · January 1, 1991
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The activities of choline acetyltransferase and acetylcholinesterase were assayed in submicrogram samples from layers of red-tailed hawk and road runner retina. Both enzyme activities were concentrated in and near the inner plexiform layer. Within the inne ...
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Journal articleVision Res · 1990
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The activities of choline acetyltransferase and acetylcholinesterase were assayed in submicrogram samples from layers of pigeon retina. Red and yellow fields were sampled separately to investigate quantitatively the relationship between these enzymes of ac ...
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