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Patrick Charbonneau

Professor of Physics
Physics
Box 90305, Durham, NC 27708-0305
124 Science Drive, 2314 French Science, Durham, NC 27708

Scholarly Works - Datasets


Data from: Dynamics and fluctuations of minimally-structured glass formers

Dataset · April 26, 2024 The mean-field theory (MFT) of simple structural glasses, which is exact in the limit of infinite spatial dimensions, d→∞, offers theoretical insight as well as quantitative predictions about certain features of d=3 systems. In order to more systematically ... Full text Cite

Data from: Equilibrium fluctuations in mean-field disordered models

Dataset · July 22, 2022 Mean-field models of glasses that present a random first order transition exhibit highly nontrivial fluctuations. Building on previous studies that focused on the critical scaling regime, we here obtain a fully quantitative framework for all equilibrium co ... Full text Cite

Data from: The dimensional evolution of structure and dynamics in hard sphere liquids

Dataset · March 30, 2022 The formulation of the mean-field infinite-dimensional solution of hard sphere glasses is a significant milestone for theoretical physics. How relevant this description might be for understanding low-dimensional glass-forming liquids, however, remains uncl ... Full text Cite

Data and scripts from: Local dynamical heterogeneity in simple glass formers

Dataset · March 18, 2022 We study the local dynamical fluctuations in glass-forming models of particles embedded in d-dimensional space, in the mean-field limit of d→∞. Our analytical calculation reveals that single-particle observables, such as squared particle displacements, dis ... Full text Cite

Data from: Three simple scenarios for high-dimensional sphere packings

Dataset · December 9, 2021 Based on results from the physics and mathematics literature which suggest a series of clearly defined conjectures, we formulate three simple scenarios for the fate of hard sphere crystallization in high dimension: in scenario A, crystallization is impeded ... Full text Cite

Data from: Thermodynamic stability of hard sphere crystals in dimensions 3 through 10

Dataset · July 28, 2021 Although much is known about the metastable liquid branch of hard spheres--from low dimension d up to the infinite dimensional limit--its crystal counterpart remains largely unexplored for d>3. In particular, it is unclear whether the crystal phase is ther ... Full text Cite

Data and scripts from: High-dimensional percolation criticality and hints of mean-field-like caging of the random Lorentz gas

Dataset · July 2, 2021 The random Lorentz gas (RLG) is a minimal model for transport in disordered media. Despite the broad relevance of the model, theoretical grasp over its properties remains weak. For instance, the scaling with dimension $d$ of its localization transition at ... Full text Cite

Data from: Solution of disordered microphases in the Bethe approximation

Dataset · June 29, 2021 The periodic microphases that self-assemble in systems with competing short-range attractive and long-range repulsive (SALR) interactions are structurally both rich and elegant. Significant theoretical and computational efforts have thus been dedicated to ... Full text Cite

Data and scripts from: Characterization and efficient Monte Carlo sampling of disordered microphases

Dataset · June 7, 2021 The disordered microphases that develop in the high-temperature phase of systems with competing short- range attractive and long-range repulsive (SALR) interactions result in a rich array of distinct morphologies, such as cluster, void cluster and percolat ... Full text Cite

Data and scripts from: Percolation thresholds on high-dimensional D_n and E_8-related lattices

Dataset · June 2, 2021 The site and bond percolation problems are conventionally studied on (hyper)cubic lattices, which afford straightforward numerical treatments. The recent implementation of efficient simulation algorithms for high-dimensional systems now also facilitates th ... Full text Cite

Data from: Mean-field caging in a random Lorentz gas

Dataset · May 25, 2021 The random Lorentz gas (RLG) is a minimal model of both percolation and glassiness, which leads to a paradox in the infinite-dimensional limit: the localization transition is then expected to be continuous for the former and discontinuous for the latter. A ... Full text Cite

Data and Scripts from: Interplay between percolation and glassiness in the random Lorentz gas

Dataset · March 1, 2021 The random Lorentz gas (RLG) is a minimal model of transport in heterogeneous media that exhibits a continuous localization transition controlled by void space percolation. The RLG also provides a toy model of particle caging, which is known to be relevant ... Full text Cite

Data from: Finite-dimensional vestige of spinodal criticality above the dynamical glass transition

Dataset · August 5, 2020 Finite-dimensional signatures of spinodal criticality are notoriously difficult to come by. The dynamical transition of glass-forming liquids, first described by mode-coupling theory, is a spinodal instability preempted by thermally activated processes tha ... Full text Cite

Data from: Postponing the dynamical transition density using competing interactions

Dataset · February 24, 2020 Systems of dense spheres interacting through very short-ranged attraction are known from theory, simulations and colloidal experiments to exhibit dynamical reentrance. Their liquid state can thus be fluidized at higher densities than possible in systems wi ... Full text Cite

Data from: Front-mediated melting of isotropic ultrastable glasses

Dataset · October 8, 2019 Ultrastable vapor-deposited glasses display uncommon material properties. Most remarkably, upon heating they are believed to melt via a liquid front that originates at the free surface and propagates over a mesoscopic crossover length, before crossing over ... Full text Cite

Data and scripts from: Using Schematic Models to Understand the Microscopic Basis for Inverted Solubility in gammaD-crystallin

Dataset · September 30, 2019 Featured Publication Inverted solubility--melting a crystal by cooling--is observed in a handful of proteins, such as carbomonoxy hemoglobin and gammaD-crystallin. In human gammaD-crystallin, the phenomenon is associated with the mutation of the 23rd residue, a proline, to a t ... Full text Cite

Data and scripts from: temperature-dependent interactions explain normal and inverted solubility in a γD-crystallin mutant

Dataset · July 17, 2019 Protein crystal production is a major bottleneck in the structural characterisation of proteins. To advance beyond large-scale screening, rational strategies for protein crystallization are crucial. Understanding how chemical anisotropy (or patchiness) of ... Full text Cite

Data and scripts from: Zero-temperature glass transition in two dimensions

Dataset · February 26, 2019 Liquids cooled towards the glass transition temperature transform into amorphous solids that have a wide range of applications. While the nature of this transformation is understood rigorously in the mean-field limit of infinite spatial dimensions, the pro ... Full text Cite

Data and scripts from: Bypassing sluggishness: SWAP algorithm and glassiness in high dimensions

Dataset · February 22, 2019 The recent implementation of a swap Monte Carlo algorithm (SWAP) for polydisperse mixtures fully bypasses computational sluggishness and closes the gap between experimental and simulation timescales in physical dimensions d=2 and 3. Here, we consider suita ... Full text Cite

Data and scripts from: Morphology of renormalization-group flow for the de Almeida–Thouless–Gardner universality class

Dataset · February 13, 2019 A replica-symmetry-breaking phase transition is predicted in a host of disordered media. The criticality of the transition has, however, long been questioned below its upper critical dimension, six, due to the absence of a critical fixed point in the renor ... Full text Cite

Data and scripts from: Glassy, Gardner-like phenomenology in minimally polydisperse crystalline systems

Dataset · February 5, 2019 We report on a nonequilibrium phase of matter, the minimally disordered crystal phase, which we find exists between the maximally amorphous glasses and the ideal crystal. Even though these near crystals appear highly ordered, they display glassy and jammin ... Full text Cite

Data and scripts from: Dynamics around the site percolation threshold on high-dimensional hypercubic lattices

Dataset · February 5, 2019 Recent advances on the glass problem motivate reexamining classical models of percolation. Here, we consider the displacement of an ant in a labyrinth near the percolation threshold on cubic lattices both below and above the upper critical dimension of sim ... Full text Cite

Data and scripts from: Obtaining soft matter models of proteins and their phase behavior

Dataset · February 4, 2019 Globular proteins are roughly spherical biomolecules with attractive, and highly directional interactions. This microscopic observation motivates describing these proteins as patchy particles: hard spheres with attractive surface patches. Mapping a biomole ... Full text Cite

Data and scripts from: Equilibrium phase behavior of the square-well linear microphase-forming model

Dataset · October 9, 2018 The data files in this collection are associated with the paper "Equilibrium phase behavior of the square-well linear microphase-forming model", Y. Zhuang, P. Charbonneau, PRL, 2016. They include .dat, .gle and .eps files with associated raw data and gener ... Full text Cite

Data and scripts from: Nontrivial critical fixed point for replica-symmetry-breaking transitions

Dataset · October 8, 2018 The transformation of the free-energy landscape from smooth to hierarchical is one of the richest features of mean-field disordered systems. A well-studied example is the de Almeida–Thouless transition for spin glasses in a magnetic field, and a similar ph ... Full text Cite

Data and scripts from: Universal non-Debye scaling in the density of states of amorphous solids

Dataset · October 4, 2018 The data files in this collection are associated with the paper "Universal Non-Debye Scaling in the Density of States of Amorphous Solids", A. Poncet, P. Charbonneau, E. I. Corwin, G. Parisi, and F. Zamponi, PRL, 2016. They include .dat, .pdf, .gnu, .eps a ... Full text Cite

Data from: A microscopic model of the Stokes-Einstein Relation in arbitrary dimension

Dataset · May 29, 2018 The Stokes--Einstein relation (SER) is one of most robust and widely employed results from the theory of liquids. Yet sizable deviations can be observed for selfsolvation, which cannot be explained by the standard hydrodynamic derivation. Here, we revisit ... Full text Cite

Data and scripts from: Correlation lengths in quasi-one-dimensional systems via transfer matrices

Dataset · May 29, 2018 Using transfer matrices up to next-nearest-neighbour (NNN) interactions, we examine the structural correlations of quasi-one-dimensional systems of hard disks confined by two parallel lines and hard spheres confined in cylinders. Simulations have shown tha ... Full text Cite

Data and scripts from: Clustering and assembly dynamics of a one-dimensional microphase former

Dataset · March 14, 2018 We study the disordered regime of a one-dimensional (1D) short-range attraction and long-range repulsion (SALR) model, whose simplicity enables detailed analysis by transfer matrices and Monte Carlo simulations. We first characterize the signature of the c ... Full text Cite

Data and Scripts from: Learning about biomolecular solvation from water in protein crystals

Dataset · February 6, 2018 Water occupies typically 50% of a protein crystal, and thus significantly contributes to the diffraction signal in crystallography experiments. Separating its contribution from that of the protein is, however, challenging because most water molecules are n ... Full text Cite

Data and scripts from: The origin of ultrastability in vapor-deposited glasses

Dataset · September 21, 2017 Glass films created by vapor-depositing molecules onto a substrate can exhibit properties similar to those of ordinary glasses aged for thousands of years. It is believed that enhanced surface mobility is the mechanism that allows vapor deposition to creat ... Full text Cite

Data and scripts from: Configurational entropy measurements in extremely supercooled liquids that break the glass ceiling

Dataset · September 19, 2017 The data files in this collection are associated with "Configurational entropy measurements in extremely supercooled liquids that break the glass ceiling", Berthier, Ludovic; Charbonneau, Patrick; Coslovich, Daniele; Ninarello, Andrea; Ozawa, Misaki; Yaida ... Full text Cite

Data and scripts from: Cycle-expansion method for the Lyapunov exponent, susceptibility, and higher moments

Dataset · September 15, 2017 Lyapunov exponents characterize the chaotic nature of dynamical systems by quantifying the growth rate of uncertainty associated with the imperfect measurement of initial conditions. Finite-time estimates of the exponent, however, experience fluctuations d ... Full text Cite

Data and scripts from: Microphase equilibrium and assembly dynamics

Dataset · August 25, 2017 Despite many attempts, ordered equilibrium microphases have yet to be obtained in experimental colloidal suspensions. The recent computation of the equilibrium phase diagram of a microscopic, particle--based microphase former (Zhuang et al., Phys.~Rev.~Let ... Full text Cite

Data and scripts from: Phase diagram and aggregation dynamics of a monolayer of paramagnetic colloids

Dataset · May 4, 2017 We have developed a tunable colloidal system and a corresponding theoretical model for studying the phase behavior of particles assembling under the influence of long-range magnetic interactions. A monolayer of paramagnetic particles is subjected to a spat ... Full text Cite

Data and scripts from: Hard sphere packings within cylinders

Dataset · March 21, 2017 The data files in this collection are associated with the paper "Hard sphere packings within cylinders", L. Fu, W. Steinhardt, Y. Zhao, J.E.S Socolar and P. Charbonneau, Soft Matter, 2016. They include .dat and .m files with associated raw data and generat ... Full text Cite

Data and scripts from: Assembly of hard spheres in a cylinder: a computational and experimental study

Dataset · March 20, 2017 The data files in this collection are associated with the paper "Assembly of hard spheres in a cylinder: a computational and experimental study", L. Fu, C. Bian, W. Shields, D. Cruz, G. Lopez and P. Charbonneau, Soft Matter (2017). They include .dat and .m ... Full text Cite

Data and scripts from: Point-to-set lengths, local structure, and glassiness

Dataset · September 14, 2016 The data files in this collection are associated with the paper "Point-to-set lengths, local structure, and glassiness", S. Yaida, P. Charbonneau, L. Berthier, and G. Tarjus, Phys. Rev. E, 2016. They include .dat, .eps and .m files with associated raw data ... Full text Cite

Data and scripts from: Growing timescales and lengthscales characterizing vibrations of amorphous solids

Dataset · July 5, 2016 The data files in this collection are associated with the paper "Growing timescales and lengthscales characterizing vibrations of amorphous solids", Y. Jin, L. Berthier, P. Charbonneau, G. Parisi, B. Seoane, and F. Zamponi, PNAS, 2016. They include .dat, . ... Full text Cite

Data and scripts from: Linking dynamical heterogeneity to static amorphous order

Dataset · May 16, 2016 The data files in this collection are associated with the paper "Linking dynamical heterogeneity to static amorphous order", P. Charbonneau, S. Yaida, E. Dyer, and J. Lee, J. Stat. Mech., 2016. They include .dat, .eps, and .m files with associated raw data ... Full text Cite