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Spatiotemporal Persistent Homology for Dynamic Metric Spaces

Publication ,  Journal Article
Kim, W; Mémoli, F
Published in: Discrete and Computational Geometry
October 1, 2021

Characterizing the dynamics of time-evolving data within the framework of topological data analysis (TDA) has been attracting increasingly more attention. Popular instances of time-evolving data include flocking/swarming behaviors in animals and social networks in the human sphere. A natural mathematical model for such collective behaviors is a dynamic point cloud, or more generally a dynamic metric space (DMS). In this paper we extend the Rips filtration stability result for (static) metric spaces to the setting of DMSs. We do this by devising a certain three-parameter “spatiotemporal” filtration of a DMS. Applying the homology functor to this filtration gives rise to multidimensional persistence module derived from the DMS. We show that this multidimensional module enjoys stability under a suitable generalization of the Gromov–Hausdorff distance which permits metrization of the collection of all DMSs. On the other hand, it is recognized that, in general, comparing two multidimensional persistence modules leads to intractable computational problems. For the purpose of practical comparison of DMSs, we focus on both the rank invariant or the dimension function of the multidimensional persistence module that is derived from a DMS. We specifically propose to utilize a certain metric d for comparing these invariants: In our work this d is either (1) a certain generalization of the erosion distance by Patel, or (2) a specialized version of the well-known interleaving distance. In either case, the metric d can be computed in polynomial time.

Published In

Discrete and Computational Geometry

DOI

EISSN

1432-0444

ISSN

0179-5376

Publication Date

October 1, 2021

Volume

66

Issue

3

Start / End Page

831 / 875

Related Subject Headings

  • Computation Theory & Mathematics
  • 0802 Computation Theory and Mathematics
  • 0103 Numerical and Computational Mathematics
  • 0101 Pure Mathematics
 

Citation

APA
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ICMJE
MLA
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Kim, W., & Mémoli, F. (2021). Spatiotemporal Persistent Homology for Dynamic Metric Spaces. Discrete and Computational Geometry, 66(3), 831–875. https://doi.org/10.1007/s00454-019-00168-w
Kim, W., and F. Mémoli. “Spatiotemporal Persistent Homology for Dynamic Metric Spaces.” Discrete and Computational Geometry 66, no. 3 (October 1, 2021): 831–75. https://doi.org/10.1007/s00454-019-00168-w.
Kim W, Mémoli F. Spatiotemporal Persistent Homology for Dynamic Metric Spaces. Discrete and Computational Geometry. 2021 Oct 1;66(3):831–75.
Kim, W., and F. Mémoli. “Spatiotemporal Persistent Homology for Dynamic Metric Spaces.” Discrete and Computational Geometry, vol. 66, no. 3, Oct. 2021, pp. 831–75. Scopus, doi:10.1007/s00454-019-00168-w.
Kim W, Mémoli F. Spatiotemporal Persistent Homology for Dynamic Metric Spaces. Discrete and Computational Geometry. 2021 Oct 1;66(3):831–875.
Journal cover image

Published In

Discrete and Computational Geometry

DOI

EISSN

1432-0444

ISSN

0179-5376

Publication Date

October 1, 2021

Volume

66

Issue

3

Start / End Page

831 / 875

Related Subject Headings

  • Computation Theory & Mathematics
  • 0802 Computation Theory and Mathematics
  • 0103 Numerical and Computational Mathematics
  • 0101 Pure Mathematics