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Application of Finite-Time and Control Thermodynamics to Biological Processes at Multiple Scales

Publication ,  Journal Article
Roach, TNF; Salamon, P; Nulton, J; Andresen, B; Felts, B; Haas, A; Calhoun, S; Robinett, N; Rohwer, F
Published in: Journal of Non-Equilibrium Thermodynamics
July 26, 2018

An overall synthesis of biology and non-equilibrium thermodynamics remains a challenge at the interface between the physical and life sciences. Herein, theorems from finite-time and control thermodynamics are applied to biological processes to indicate which biological strategies will succeed over different time scales. In general, living systems maximize power at the expense of efficiency during the early stages of their development while proceeding at slower rates to maximize efficiency over longer time scales. The exact combination of yield and power depends upon the constraints on the system, the degrees of freedom in question, and the time scales of the processes. It is emphasized that biological processes are not driven by entropy production but, rather, by informed exergy flow. The entropy production is the generalized friction that is minimized insofar as the constraints allow. Theorems concerning thermodynamic path length and entropy production show that there is a direct tradeoff between the efficiency of a process and the process rate. To quantify this tradeoff, the concepts of compensated heat and waste heat are introduced. Compensated heat is the exergy dissipated, which is necessary for a process to satisfy constraints. Conversely, waste heat is exergy that is dissipated as heat, but does not provide a compensatory increase in rate or other improvement. We hypothesize that it is waste heat that is minimized through natural selection. This can be seen in the strategies employed at several temporal and spatial scales, including organismal development, ecological succession, and long-term evolution. Better understanding the roles of compensated heat and waste heat in biological processes will provide novel insight into the underlying thermodynamic mechanisms involved in metabolism, ecology, and evolution.

Duke Scholars

Published In

Journal of Non-Equilibrium Thermodynamics

DOI

EISSN

1437-4358

ISSN

0340-0204

Publication Date

July 26, 2018

Volume

43

Issue

3

Start / End Page

193 / 210

Related Subject Headings

  • Fluids & Plasmas
  • 4012 Fluid mechanics and thermal engineering
  • 0915 Interdisciplinary Engineering
 

Citation

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Roach, T. N. F., Salamon, P., Nulton, J., Andresen, B., Felts, B., Haas, A., … Rohwer, F. (2018). Application of Finite-Time and Control Thermodynamics to Biological Processes at Multiple Scales. Journal of Non-Equilibrium Thermodynamics, 43(3), 193–210. https://doi.org/10.1515/jnet-2018-0008
Roach, T. N. F., P. Salamon, J. Nulton, B. Andresen, B. Felts, A. Haas, S. Calhoun, N. Robinett, and F. Rohwer. “Application of Finite-Time and Control Thermodynamics to Biological Processes at Multiple Scales.” Journal of Non-Equilibrium Thermodynamics 43, no. 3 (July 26, 2018): 193–210. https://doi.org/10.1515/jnet-2018-0008.
Roach TNF, Salamon P, Nulton J, Andresen B, Felts B, Haas A, et al. Application of Finite-Time and Control Thermodynamics to Biological Processes at Multiple Scales. Journal of Non-Equilibrium Thermodynamics. 2018 Jul 26;43(3):193–210.
Roach, T. N. F., et al. “Application of Finite-Time and Control Thermodynamics to Biological Processes at Multiple Scales.” Journal of Non-Equilibrium Thermodynamics, vol. 43, no. 3, July 2018, pp. 193–210. Scopus, doi:10.1515/jnet-2018-0008.
Roach TNF, Salamon P, Nulton J, Andresen B, Felts B, Haas A, Calhoun S, Robinett N, Rohwer F. Application of Finite-Time and Control Thermodynamics to Biological Processes at Multiple Scales. Journal of Non-Equilibrium Thermodynamics. 2018 Jul 26;43(3):193–210.
Journal cover image

Published In

Journal of Non-Equilibrium Thermodynamics

DOI

EISSN

1437-4358

ISSN

0340-0204

Publication Date

July 26, 2018

Volume

43

Issue

3

Start / End Page

193 / 210

Related Subject Headings

  • Fluids & Plasmas
  • 4012 Fluid mechanics and thermal engineering
  • 0915 Interdisciplinary Engineering