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PCT-Anchored Machine Learning for Pre-Culture Identification of Gram-Negative Sepsis in Children: A Four-Site Study.

Journal articles  - Journal Article
Velez, T; Dewan, M; Badaki-Makun, O; Hirsch, D; Mercurio, DC; Depinet, H; Kamaleswaran, R; Grunwell, J; Triantafyllou, M; Wolff, N; Macias, C ...
Published in: Shock
June 22, 2026

OBJECTIVE: Procalcitonin (PCT) has moderate accuracy for bacteremia detection but is infrequently used in pediatric emergency departments, partly due to poor sensitivity when applied as a standalone threshold and guideline recommendations against its isolated use. We evaluated whether a machine learning (ML) approach that contextualizes PCT with additional clinical features has the potential to improve detection of gram-negative bacteremic organ dysfunction in children prior to culture results. METHODS: We conducted a retrospective analysis of 431 pediatric encounters across four sites where blood culture and PCT were co-ordered. Blood culture results were classified as gram-negative bloodstream infection (BSI), gram-positive BSI, contaminant, or negative using a priority-based NLP algorithm applied to free-text result strings. The primary outcome was gram-negative BSI with concurrent organ dysfunction ascertained by Phoenix-8 criteria excluding the immunologic domain. We evaluated PCT alone, a four-feature adult sepsis-aligned benchmarking model, and candidate multi-feature combinations identified through systematic univariate screening, using Random Forest (RF) and penalized logistic regression (LASSO) as co-primary algorithms with nested repeated stratified cross-validation and permutation importance analysis. Model discrimination was compared using paired fold-level AUROC testing and calibration was assessed using Platt scaling. RESULTS: Among 431 encounters with a numeric PCT result, 20 (4.6%) met the primary outcome of gram-negative BSI with Phoenix-8 organ dysfunction. PCT alone achieved AUROC 0.762. A four-feature adult sepsis-aligned model achieved AUROC 0.862; respiratory rate and systolic blood pressure contributed negligibly. Systematic screening identified platelet count and creatinine as optimal co-features; the three-feature model (PCT, platelet count, creatinine) achieved AUROC 0.884 (BCa 95% CI 0.871-0.982), consistent across RF and LASSO (0.874), with Brier score 0.038 below the null model (0.044), and positive likelihood ratio 12.56 (number needed to assess of 2.6). CONCLUSIONS: PCT alone showed limited performance. Embedding PCT within a 3-feature ML model improved discrimination over PCT alone (delta AUROC 0.122, p<0.001), with consistent performance across RF and LASSO. Unlike adult models, pediatric prediction relied on renal dysfunction (creatinine) rather than hemodynamics. These findings are hypothesis-generating and require prospective validation in adequately powered cohorts before clinical implementation.

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Published In

Shock

DOI

EISSN

1540-0514

Publication Date

June 22, 2026

Location

United States

Related Subject Headings

  • Emergency & Critical Care Medicine
  • 3202 Clinical sciences
 

Citation

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Velez, T., Dewan, M., Badaki-Makun, O., Hirsch, D., Mercurio, D. C., Depinet, H., … Koutroulis, I. (2026). PCT-Anchored Machine Learning for Pre-Culture Identification of Gram-Negative Sepsis in Children: A Four-Site Study. Shock. https://doi.org/10.1097/SHK.0000000000002895
Velez, Tom, Maya Dewan, Oluwakemi Badaki-Makun, Danielle Hirsch, Danielle Claire Mercurio, Holly Depinet, Rishikesan Kamaleswaran, et al. “PCT-Anchored Machine Learning for Pre-Culture Identification of Gram-Negative Sepsis in Children: A Four-Site Study.Shock, June 22, 2026. https://doi.org/10.1097/SHK.0000000000002895.
Velez T, Dewan M, Badaki-Makun O, Hirsch D, Mercurio DC, Depinet H, et al. PCT-Anchored Machine Learning for Pre-Culture Identification of Gram-Negative Sepsis in Children: A Four-Site Study. Shock. 2026 Jun 22;
Velez, Tom, et al. “PCT-Anchored Machine Learning for Pre-Culture Identification of Gram-Negative Sepsis in Children: A Four-Site Study.Shock, June 2026. Pubmed, doi:10.1097/SHK.0000000000002895.
Velez T, Dewan M, Badaki-Makun O, Hirsch D, Mercurio DC, Depinet H, Kamaleswaran R, Grunwell J, Triantafyllou M, Wolff N, Abdelrahman F, Macias C, Koutroulis I. PCT-Anchored Machine Learning for Pre-Culture Identification of Gram-Negative Sepsis in Children: A Four-Site Study. Shock. 2026 Jun 22;

Published In

Shock

DOI

EISSN

1540-0514

Publication Date

June 22, 2026

Location

United States

Related Subject Headings

  • Emergency & Critical Care Medicine
  • 3202 Clinical sciences