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Scalable and Efficient Deep Learning-Based Pipeline for Mitotic Detection and Analysis in Pathology Images.

Journal articles  - Journal Article
Qi, X; LaBella, D; Sanford, T; Turkbey, I; Lee, M
Published in: Cancers (Basel)
June 1, 2026

Background: Accurate and efficient analysis of mitotic figures in whole-slide images (WSIs) is essential for tumor grading and prognosis. Methods: In this work, we present a three-stage pipeline for WSI-scale mitosis analysis that balances accuracy with clinical throughput: (1) a YOLOv11-based detector to propose mitosis candidates; (2) an ultra-lightweight classifier to refine detections and suppress false positives; and (3) a downstream classifier to distinguish atypical from normal mitoses for deeper biological insight. Results: In benchmark datasets, the two-stage detector improves F1 over detection-only baselines, while the atypical/normal module achieves strong accuracy, demonstrating cross-domain generalization. We further perform a proof-of-concept survival analysis on early-stage (I-II) cases from the TCGA-BRCA cohort, suggesting that mitosis-derived features may provide modest incremental prognostic information beyond the clinical baseline and nuclei features. Conclusions: Overall, the method delivers accurate detection, robust atypical mitosis classification, and high efficiency, processing gigapixel WSIs in minutes on a single GPU, positioning it for large-scale translational studies and future clinical workflow validation.

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Published In

Cancers (Basel)

DOI

ISSN

2072-6694

Publication Date

June 1, 2026

Volume

18

Issue

11

Location

Switzerland

Related Subject Headings

  • 3211 Oncology and carcinogenesis
 

Citation

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Qi, X., LaBella, D., Sanford, T., Turkbey, I., & Lee, M. (2026). Scalable and Efficient Deep Learning-Based Pipeline for Mitotic Detection and Analysis in Pathology Images. Cancers (Basel), 18(11). https://doi.org/10.3390/cancers18111807
Qi, Xuan, Dominic LaBella, Thomas Sanford, Ismail Turkbey, and Maxwell Lee. “Scalable and Efficient Deep Learning-Based Pipeline for Mitotic Detection and Analysis in Pathology Images.” Cancers (Basel) 18, no. 11 (June 1, 2026). https://doi.org/10.3390/cancers18111807.
Qi X, LaBella D, Sanford T, Turkbey I, Lee M. Scalable and Efficient Deep Learning-Based Pipeline for Mitotic Detection and Analysis in Pathology Images. Cancers (Basel). 2026 Jun 1;18(11).
Qi, Xuan, et al. “Scalable and Efficient Deep Learning-Based Pipeline for Mitotic Detection and Analysis in Pathology Images.” Cancers (Basel), vol. 18, no. 11, June 2026. Pubmed, doi:10.3390/cancers18111807.
Qi X, LaBella D, Sanford T, Turkbey I, Lee M. Scalable and Efficient Deep Learning-Based Pipeline for Mitotic Detection and Analysis in Pathology Images. Cancers (Basel). 2026 Jun 1;18(11).

Published In

Cancers (Basel)

DOI

ISSN

2072-6694

Publication Date

June 1, 2026

Volume

18

Issue

11

Location

Switzerland

Related Subject Headings

  • 3211 Oncology and carcinogenesis