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Analysis of the BraTS 2023 Intracranial Meningioma Segmentation Challenge

Journal articles
LaBella, D; Baid, U; Khanna, O; McBurney-Lin, S; McLean, R; Nedelec, P; Rashid, A; Tahon, NH; Altes, T; Bhalerao, R; Dhemesh, Y; Godfrey, D ...
Published in: Machine Learning for Biomedical Imaging
March 7, 2025

We describe the design and results from the BraTS 2023 Intracranial Meningioma Segmentation Challenge. The BraTS Meningioma Challenge differed from prior BraTS Glioma challenges in that it focused on meningiomas, which are typically benign extra-axial tumors with diverse radiologic and anatomical presentation and a propensity for multiplicity. Nine participating teams each developed deep-learning automated segmentation models using image data from the largest multi-institutional systematically expert annotated multilabel multi-sequence meningioma MRI dataset to date, which included 1000 training set cases, 141 validation set cases, and 283 hidden test set cases. Each case included T2, FLAIR, T1, and T1Gd brain MRI sequences with associated tumor compartment labels delineating enhancing tumor, non-enhancing tumor, and surrounding non-enhancing FLAIR hyperintensity. Participant automated segmentation models were evaluated and ranked based on a scoring system evaluating lesion-wise metrics including dice similarity coefficient (DSC) and 95% Hausdorff Distance. The top ranked team had a lesion-wise median dice similarity coefficient (DSC) of 0.976, 0.976, and 0.964 for enhancing tumor, tumor core, and whole tumor, respectively and a corresponding average DSC of 0.899, 0.904, and 0.871, respectively. These results serve as state-of-the-art benchmarks for future pre-operative meningioma automated segmentation algorithms. Additionally, we found that 1286 of 1424 cases (90.3%) had at least 1 compartment voxel abutting the edge of the skull-stripped image edge, which requires further investigation into optimal pre-processing face anonymization steps.

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Published In

Machine Learning for Biomedical Imaging

DOI

EISSN

2766-905X

Publication Date

March 7, 2025

Volume

2025

Issue

March 2025

Start / End Page

38 / 58

Publisher

Machine Learning for Biomedical Imaging
 

Citation

APA
Chicago
ICMJE
MLA
NLM
LaBella, D., Baid, U., Khanna, O., McBurney-Lin, S., McLean, R., Nedelec, P., … Calabrese, E. (2025). Analysis of the BraTS 2023 Intracranial Meningioma Segmentation Challenge. Machine Learning for Biomedical Imaging, 2025(March 2025), 38–58. https://doi.org/10.59275/j.melba.2025-bea1
LaBella, Dominic, Ujjwal Baid, Omaditya Khanna, Shan McBurney-Lin, Ryan McLean, Pierre Nedelec, Arif Rashid, et al. “Analysis of the BraTS 2023 Intracranial Meningioma Segmentation Challenge.” Machine Learning for Biomedical Imaging 2025, no. March 2025 (March 7, 2025): 38–58. https://doi.org/10.59275/j.melba.2025-bea1.
LaBella D, Baid U, Khanna O, McBurney-Lin S, McLean R, Nedelec P, et al. Analysis of the BraTS 2023 Intracranial Meningioma Segmentation Challenge. Machine Learning for Biomedical Imaging. 2025 Mar 7;2025(March 2025):38–58.
LaBella, Dominic, et al. “Analysis of the BraTS 2023 Intracranial Meningioma Segmentation Challenge.” Machine Learning for Biomedical Imaging, vol. 2025, no. March 2025, Machine Learning for Biomedical Imaging, Mar. 2025, pp. 38–58. Crossref, doi:10.59275/j.melba.2025-bea1.
LaBella D, Baid U, Khanna O, McBurney-Lin S, McLean R, Nedelec P, Rashid A, Tahon NH, Altes T, Bhalerao R, Dhemesh Y, Godfrey D, Hilal F, Floyd S, Janas A, Kazerooni AF, Kirkpatrick J, Kent C, Kofler F, Leu K, Maleki N, Menze B, Pajot M, Reitman ZJ, Rudie JD, Saluja R, Velichko Y, Wang C, Warman P, Adewole M, Albrecht J, Anazodo U, Anwar SM, Bergquist T, Chen SF, Chung V, Chai R, Conte G-M, Dako F, Eddy J, Ezhov I, Khalili N, Iglesias JE, Jiang Z, Johanson E, Van Leemput K, Li HB, Linguraru MG, Liu X, Mahtabfar A, Meier Z, Moawad AW, Mongan J, Piraud M, Shinohara RT, Wiggins WF, Abayazeed AH, Akinola R, Jakab A, Bilello M, Correia de Verdier M, Crivellaro P, Davatzikos C, Farahani K, Freymann J, Hess C, Huang R, Lohmann P, Moassefi M, Pease MW, Vollmuth P, Sollmann N, Diffley D, Nandolia KK, Warren DI, Hussain A, Fehringer P, Bronstein Y, Deptula L, Stein EG, Taherzadeh M, Portela de Oliveira E, Haughey A, Kontzialis M, Saba L, Turner B, Brüßeler MMT, Ansari S, Gkampenis A, Weiss DM, Mansour A, Shawali IH, Yordanov N, Stein JM, Hourani R, Moshebah MY, Abouelatta AM, Rizvi T, Willms K, Martin DC, Okar A, D’Anna G, Taha A, Sharifi Y, Faghani S, Kite D, Pinho M, Haider MA, Aristizabal A, Karargyris A, Kassem H, Pati S, Sheller M, Alonso-Basanta M, Villanueva-Meyer J, Rauschecker AM, Nada A, Aboian M, Flanders AE, Wiestler B, Bakas S, Calabrese E. Analysis of the BraTS 2023 Intracranial Meningioma Segmentation Challenge. Machine Learning for Biomedical Imaging. Machine Learning for Biomedical Imaging; 2025 Mar 7;2025(March 2025):38–58.

Published In

Machine Learning for Biomedical Imaging

DOI

EISSN

2766-905X

Publication Date

March 7, 2025

Volume

2025

Issue

March 2025

Start / End Page

38 / 58

Publisher

Machine Learning for Biomedical Imaging