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The intolerance to functional genetic variation of protein domains predicts the localization of pathogenic mutations within genes.

Publication ,  Journal Article
Gussow, AB; Petrovski, S; Wang, Q; Allen, AS; Goldstein, DB
Published in: Genome Biol
January 18, 2016

Ranking human genes based on their tolerance to functional genetic variation can greatly facilitate patient genome interpretation. It is well established, however, that different parts of proteins can have different functions, suggesting that it will ultimately be more informative to focus attention on functionally distinct portions of genes. Here we evaluate the intolerance of genic sub-regions using two biological sub-region classifications. We show that the intolerance scores of these sub-regions significantly correlate with reported pathogenic mutations. This observation extends the utility of intolerance scores to indicating where pathogenic mutations are mostly likely to fall within genes.

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Published In

Genome Biol

DOI

EISSN

1474-760X

Publication Date

January 18, 2016

Volume

17

Start / End Page

9

Location

England

Related Subject Headings

  • Protein Structure, Tertiary
  • Open Reading Frames
  • Mutation
  • Humans
  • Genome, Human
  • Genetic Variation
  • Exons
  • Bioinformatics
  • 08 Information and Computing Sciences
  • 06 Biological Sciences
 

Citation

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Gussow, A. B., Petrovski, S., Wang, Q., Allen, A. S., & Goldstein, D. B. (2016). The intolerance to functional genetic variation of protein domains predicts the localization of pathogenic mutations within genes. Genome Biol, 17, 9. https://doi.org/10.1186/s13059-016-0869-4
Gussow, Ayal B., Slavé Petrovski, Quanli Wang, Andrew S. Allen, and David B. Goldstein. “The intolerance to functional genetic variation of protein domains predicts the localization of pathogenic mutations within genes.Genome Biol 17 (January 18, 2016): 9. https://doi.org/10.1186/s13059-016-0869-4.
Gussow AB, Petrovski S, Wang Q, Allen AS, Goldstein DB. The intolerance to functional genetic variation of protein domains predicts the localization of pathogenic mutations within genes. Genome Biol. 2016 Jan 18;17:9.
Gussow, Ayal B., et al. “The intolerance to functional genetic variation of protein domains predicts the localization of pathogenic mutations within genes.Genome Biol, vol. 17, Jan. 2016, p. 9. Pubmed, doi:10.1186/s13059-016-0869-4.
Gussow AB, Petrovski S, Wang Q, Allen AS, Goldstein DB. The intolerance to functional genetic variation of protein domains predicts the localization of pathogenic mutations within genes. Genome Biol. 2016 Jan 18;17:9.

Published In

Genome Biol

DOI

EISSN

1474-760X

Publication Date

January 18, 2016

Volume

17

Start / End Page

9

Location

England

Related Subject Headings

  • Protein Structure, Tertiary
  • Open Reading Frames
  • Mutation
  • Humans
  • Genome, Human
  • Genetic Variation
  • Exons
  • Bioinformatics
  • 08 Information and Computing Sciences
  • 06 Biological Sciences