Skip to main content

Andrew Scott Allen

Professor of Biostatistics & Bioinformatics
Biostatistics & Bioinformatics, Division of Integrative Genomics
Duke Box 103854, Durham, NC 27710
3 Genome Ct, 1245 MSRB III, Durham, NC 27705

Overview


My research focuses on developing new statistical methods for identifying susceptibility loci involved in complex human disease.  It involves a mix of genetics, statistics, and computer science and is motivated by the complexities of real data encountered in collaborative disease-gene mapping projects.

Current Duke Appointments & Affiliations


Professor of Biostatistics & Bioinformatics · 2019 - Present Biostatistics & Bioinformatics, Division of Integrative Genomics, Biostatistics & Bioinformatics
Director, Center for Statistical Genetics and Genomics · 2015 - Present Biostatistics & Bioinformatics, Division of Biostatistics, Biostatistics & Bioinformatics
Chief, Division of Integrative Genomics · 2018 - Present Biostatistics & Bioinformatics, Division of Biostatistics, Biostatistics & Bioinformatics

Recent News Items


Published September 3, 2015
School of Medicine announces new Center for Statistical Genetics and Genomics
Published March 26, 2015
Andrew Allen quoted: The father of all humans lived 239,000 years ago

View All News Items

Recent Scholarly Works


Probabilistic mapping of sub-genic intolerance reveals functional and disease-critical protein regions.

Preprint · September 16, 2026 Different regions of genes perform distinct functions and vary in their importance to human health. Evolutionary intolerance provides a powerful means of identifying regions where disruptive mutations are under strong purifying selection, informing genetic ... Full text Link to item Cite

Genetic Determinants of Early Heart Failure in Hypoplastic Left Heart Syndrome: A Prospective NC-DEFINE Study.

Journal article J Am Coll Cardiol · September 8, 2026 BACKGROUND: Survivors of hypoplastic left heart syndrome (HLHS), the most severe form of congenital heart disease, are at high risk for heart failure (HF). HF in early life is a major contributor to mortality in this vulnerable population. However, reliabl ... Full text Link to item Cite

Region-Level Design and Analysis of CRISPR Perturbation Screens with FRACTEL.

Preprint · July 7, 2026 We present FRACTEL, a statistical framework for region-level analysis of CRISPR perturbation screens. FRACTEL aggregates gRNA p-values using a bounded minimum across order statistics, preserving scale and enabling adaptive sensitivity to sparse or diffuse ... Full text Link to item Cite
View All Scholarly Works

Recent Grants


Computational Biology and Bioinformatics Training Grant

Inst. Training Prgm or CMEMentor · Awarded by National Institutes of Health · 2026 - 2031

iPediHeart: Interdisciplinary Research Training Program for Pediatric Heart Disease

Inst. Training Prgm or CMEMentor · Awarded by National Heart, Lung, and Blood Institute · 2025 - 2030

Determining the genetic and social determinants of heart failure and mortality in patients with congenital heart disease

ResearchCo Investigator · Awarded by Children's Hospital of Philadelphia · 2026 - 2028

View All Grants

Education


Emory University · 2001 Ph.D.

External Links


Lab page