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A hidden Markov model approach to analyze longitudinal ternary outcomes when some observed states are possibly misclassified.

Publication ,  Journal Article
Benoit, JS; Chan, W; Luo, S; Yeh, H-W; Doody, R
Published in: Stat Med
April 30, 2016

Understanding the dynamic disease process is vital in early detection, diagnosis, and measuring progression. Continuous-time Markov chain (CTMC) methods have been used to estimate state-change intensities but challenges arise when stages are potentially misclassified. We present an analytical likelihood approach where the hidden state is modeled as a three-state CTMC model allowing for some observed states to be possibly misclassified. Covariate effects of the hidden process and misclassification probabilities of the hidden state are estimated without information from a 'gold standard' as comparison. Parameter estimates are obtained using a modified expectation-maximization (EM) algorithm, and identifiability of CTMC estimation is addressed. Simulation studies and an application studying Alzheimer's disease caregiver stress-levels are presented. The method was highly sensitive to detecting true misclassification and did not falsely identify error in the absence of misclassification. In conclusion, we have developed a robust longitudinal method for analyzing categorical outcome data when classification of disease severity stage is uncertain and the purpose is to study the process' transition behavior without a gold standard.

Duke Scholars

Published In

Stat Med

DOI

EISSN

1097-0258

Publication Date

April 30, 2016

Volume

35

Issue

9

Start / End Page

1549 / 1557

Location

England

Related Subject Headings

  • Treatment Outcome
  • Time Factors
  • Statistics & Probability
  • Models, Statistical
  • Markov Chains
  • Longitudinal Studies
  • Humans
  • Early Diagnosis
  • Data Interpretation, Statistical
  • Data Accuracy
 

Citation

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Benoit, J. S., Chan, W., Luo, S., Yeh, H.-W., & Doody, R. (2016). A hidden Markov model approach to analyze longitudinal ternary outcomes when some observed states are possibly misclassified. Stat Med, 35(9), 1549–1557. https://doi.org/10.1002/sim.6861
Benoit, Julia S., Wenyaw Chan, Sheng Luo, Hung-Wen Yeh, and Rachelle Doody. “A hidden Markov model approach to analyze longitudinal ternary outcomes when some observed states are possibly misclassified.Stat Med 35, no. 9 (April 30, 2016): 1549–57. https://doi.org/10.1002/sim.6861.
Benoit, Julia S., et al. “A hidden Markov model approach to analyze longitudinal ternary outcomes when some observed states are possibly misclassified.Stat Med, vol. 35, no. 9, Apr. 2016, pp. 1549–57. Pubmed, doi:10.1002/sim.6861.
Benoit JS, Chan W, Luo S, Yeh H-W, Doody R. A hidden Markov model approach to analyze longitudinal ternary outcomes when some observed states are possibly misclassified. Stat Med. 2016 Apr 30;35(9):1549–1557.
Journal cover image

Published In

Stat Med

DOI

EISSN

1097-0258

Publication Date

April 30, 2016

Volume

35

Issue

9

Start / End Page

1549 / 1557

Location

England

Related Subject Headings

  • Treatment Outcome
  • Time Factors
  • Statistics & Probability
  • Models, Statistical
  • Markov Chains
  • Longitudinal Studies
  • Humans
  • Early Diagnosis
  • Data Interpretation, Statistical
  • Data Accuracy