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Engineering synthetic TALE and CRISPR/Cas9 transcription factors for regulating gene expression.

Publication ,  Journal Article
Kabadi, AM; Gersbach, CA
Published in: Methods (San Diego, Calif.)
September 2014

Engineered DNA-binding proteins that can be targeted to specific sites in the genome to manipulate gene expression have enabled many advances in biomedical research. This includes generating tools to study fundamental aspects of gene regulation and the development of a new class of gene therapies that alter the expression of endogenous genes. Designed transcription factors have entered clinical trials for the treatment of human diseases and others are in preclinical development. High-throughput and user-friendly platforms for designing synthetic DNA-binding proteins present innovative methods for deciphering cell biology and designing custom synthetic gene circuits. We review two platforms for designing synthetic transcription factors for manipulating gene expression: Transcription activator-like effectors (TALEs) and the RNA-guided clustered regularly interspaced short palindromic repeats (CRISPR)/Cas9 system. We present an overview of each technology and a guide for designing and assembling custom TALE- and CRISPR/Cas9-based transcription factors. We also discuss characteristics of each platform that are best suited for different applications.

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Published In

Methods (San Diego, Calif.)

DOI

EISSN

1095-9130

ISSN

1046-2023

Publication Date

September 2014

Volume

69

Issue

2

Start / End Page

188 / 197

Related Subject Headings

  • Transcription Factors
  • Protein Structure, Secondary
  • Molecular Sequence Data
  • Humans
  • Genetic Engineering
  • Gene Expression Regulation
  • DNA-Binding Proteins
  • Clustered Regularly Interspaced Short Palindromic Repeats
  • CRISPR-Cas Systems
  • Base Sequence
 

Citation

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Kabadi, A. M., & Gersbach, C. A. (2014). Engineering synthetic TALE and CRISPR/Cas9 transcription factors for regulating gene expression. Methods (San Diego, Calif.), 69(2), 188–197. https://doi.org/10.1016/j.ymeth.2014.06.014
Kabadi, Ami M., and Charles A. Gersbach. “Engineering synthetic TALE and CRISPR/Cas9 transcription factors for regulating gene expression.Methods (San Diego, Calif.) 69, no. 2 (September 2014): 188–97. https://doi.org/10.1016/j.ymeth.2014.06.014.
Kabadi AM, Gersbach CA. Engineering synthetic TALE and CRISPR/Cas9 transcription factors for regulating gene expression. Methods (San Diego, Calif). 2014 Sep;69(2):188–97.
Kabadi, Ami M., and Charles A. Gersbach. “Engineering synthetic TALE and CRISPR/Cas9 transcription factors for regulating gene expression.Methods (San Diego, Calif.), vol. 69, no. 2, Sept. 2014, pp. 188–97. Epmc, doi:10.1016/j.ymeth.2014.06.014.
Kabadi AM, Gersbach CA. Engineering synthetic TALE and CRISPR/Cas9 transcription factors for regulating gene expression. Methods (San Diego, Calif). 2014 Sep;69(2):188–197.
Journal cover image

Published In

Methods (San Diego, Calif.)

DOI

EISSN

1095-9130

ISSN

1046-2023

Publication Date

September 2014

Volume

69

Issue

2

Start / End Page

188 / 197

Related Subject Headings

  • Transcription Factors
  • Protein Structure, Secondary
  • Molecular Sequence Data
  • Humans
  • Genetic Engineering
  • Gene Expression Regulation
  • DNA-Binding Proteins
  • Clustered Regularly Interspaced Short Palindromic Repeats
  • CRISPR-Cas Systems
  • Base Sequence