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Extending the Lifetime of MEDA Biochips by Selective Sensing on Microelectrodes

Publication ,  Journal Article
Liang, TC; Zhong, Z; Pajic, M; Chakrabarty, K
Published in: IEEE Transactions on Computer Aided Design of Integrated Circuits and Systems
November 1, 2020

A digital microfluidic biochip (DMFB) enables miniaturization of immunoassays, point-of-care clinical diagnostics, and DNA sequencing. A recent generation of DMFBs uses a micro-electrode-dot-array (MEDA) architecture, which provides fine-grained control of droplets and real-time droplet sensing using the CMOS technology. However, microelectrodes in a MEDA biochip degrade when they are charged and discharged frequently during bioassay execution. In this article, we first make the key observation that the droplet-sensing operations contribute up to 94% of all microelectrode actuation in MEDA. Consequently, to reduce the number of droplet-sensing operations, we present a new microelectrode cell (MC) design as well as a selective-sensing method such that only a small fraction of microelectrodes perform droplet sensing during bioassay execution. The selection of microelectrodes that need to perform the droplet sensing is based on an analysis of experimental data. A comprehensive set of simulation results show that the total number of droplet-sensing operations is reduced to only 0.7%, which prolongs the lifespan of a MEDA biochip by $11\times $ without any impact on bioassay time-to-response.

Duke Scholars

Published In

IEEE Transactions on Computer Aided Design of Integrated Circuits and Systems

DOI

EISSN

1937-4151

ISSN

0278-0070

Publication Date

November 1, 2020

Volume

39

Issue

11

Start / End Page

3531 / 3543

Related Subject Headings

  • Computer Hardware & Architecture
  • 4607 Graphics, augmented reality and games
  • 4009 Electronics, sensors and digital hardware
  • 1006 Computer Hardware
  • 0906 Electrical and Electronic Engineering
 

Citation

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ICMJE
MLA
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Liang, T. C., Zhong, Z., Pajic, M., & Chakrabarty, K. (2020). Extending the Lifetime of MEDA Biochips by Selective Sensing on Microelectrodes. IEEE Transactions on Computer Aided Design of Integrated Circuits and Systems, 39(11), 3531–3543. https://doi.org/10.1109/TCAD.2020.3012746
Liang, T. C., Z. Zhong, M. Pajic, and K. Chakrabarty. “Extending the Lifetime of MEDA Biochips by Selective Sensing on Microelectrodes.” IEEE Transactions on Computer Aided Design of Integrated Circuits and Systems 39, no. 11 (November 1, 2020): 3531–43. https://doi.org/10.1109/TCAD.2020.3012746.
Liang TC, Zhong Z, Pajic M, Chakrabarty K. Extending the Lifetime of MEDA Biochips by Selective Sensing on Microelectrodes. IEEE Transactions on Computer Aided Design of Integrated Circuits and Systems. 2020 Nov 1;39(11):3531–43.
Liang, T. C., et al. “Extending the Lifetime of MEDA Biochips by Selective Sensing on Microelectrodes.” IEEE Transactions on Computer Aided Design of Integrated Circuits and Systems, vol. 39, no. 11, Nov. 2020, pp. 3531–43. Scopus, doi:10.1109/TCAD.2020.3012746.
Liang TC, Zhong Z, Pajic M, Chakrabarty K. Extending the Lifetime of MEDA Biochips by Selective Sensing on Microelectrodes. IEEE Transactions on Computer Aided Design of Integrated Circuits and Systems. 2020 Nov 1;39(11):3531–3543.

Published In

IEEE Transactions on Computer Aided Design of Integrated Circuits and Systems

DOI

EISSN

1937-4151

ISSN

0278-0070

Publication Date

November 1, 2020

Volume

39

Issue

11

Start / End Page

3531 / 3543

Related Subject Headings

  • Computer Hardware & Architecture
  • 4607 Graphics, augmented reality and games
  • 4009 Electronics, sensors and digital hardware
  • 1006 Computer Hardware
  • 0906 Electrical and Electronic Engineering