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Extending the Lifetime of MEDA Biochips by Selective Sensing on Microelectrodes

Publication ,  Journal Article
Liang, TC; Zhong, Z; Pajic, M; Chakrabarty, K
Published in: IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems
November 1, 2020

A digital microfluidic biochip (DMFB) enables miniaturization of immunoassays, point-of-care clinical diagnostics, and DNA sequencing. A recent generation of DMFBs uses a micro-electrode-dot-array (MEDA) architecture, which provides fine-grained control of droplets and real-time droplet sensing using the CMOS technology. However, microelectrodes in a MEDA biochip degrade when they are charged and discharged frequently during bioassay execution. In this article, we first make the key observation that the droplet-sensing operations contribute up to 94% of all microelectrode actuation in MEDA. Consequently, to reduce the number of droplet-sensing operations, we present a new microelectrode cell (MC) design as well as a selective-sensing method such that only a small fraction of microelectrodes perform droplet sensing during bioassay execution. The selection of microelectrodes that need to perform the droplet sensing is based on an analysis of experimental data. A comprehensive set of simulation results show that the total number of droplet-sensing operations is reduced to only 0.7%, which prolongs the lifespan of a MEDA biochip by $11\times $ without any impact on bioassay time-to-response.

Duke Scholars

Published In

IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems

DOI

EISSN

1937-4151

ISSN

0278-0070

Publication Date

November 1, 2020

Volume

39

Issue

11

Start / End Page

3531 / 3543

Related Subject Headings

  • Computer Hardware & Architecture
  • 4607 Graphics, augmented reality and games
  • 4009 Electronics, sensors and digital hardware
  • 1006 Computer Hardware
  • 0906 Electrical and Electronic Engineering
 

Citation

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Liang, T. C., Zhong, Z., Pajic, M., & Chakrabarty, K. (2020). Extending the Lifetime of MEDA Biochips by Selective Sensing on Microelectrodes. IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems, 39(11), 3531–3543. https://doi.org/10.1109/TCAD.2020.3012746
Liang, T. C., Z. Zhong, M. Pajic, and K. Chakrabarty. “Extending the Lifetime of MEDA Biochips by Selective Sensing on Microelectrodes.” IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems 39, no. 11 (November 1, 2020): 3531–43. https://doi.org/10.1109/TCAD.2020.3012746.
Liang TC, Zhong Z, Pajic M, Chakrabarty K. Extending the Lifetime of MEDA Biochips by Selective Sensing on Microelectrodes. IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems. 2020 Nov 1;39(11):3531–43.
Liang, T. C., et al. “Extending the Lifetime of MEDA Biochips by Selective Sensing on Microelectrodes.” IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems, vol. 39, no. 11, Nov. 2020, pp. 3531–43. Scopus, doi:10.1109/TCAD.2020.3012746.
Liang TC, Zhong Z, Pajic M, Chakrabarty K. Extending the Lifetime of MEDA Biochips by Selective Sensing on Microelectrodes. IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems. 2020 Nov 1;39(11):3531–3543.

Published In

IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems

DOI

EISSN

1937-4151

ISSN

0278-0070

Publication Date

November 1, 2020

Volume

39

Issue

11

Start / End Page

3531 / 3543

Related Subject Headings

  • Computer Hardware & Architecture
  • 4607 Graphics, augmented reality and games
  • 4009 Electronics, sensors and digital hardware
  • 1006 Computer Hardware
  • 0906 Electrical and Electronic Engineering