Skip to main content
Journal cover image

Quantitative assessment of ligand bias from bias plots: The bias coefficient "kappa".

Publication ,  Journal Article
Karl, K; Rajagopal, S; Hristova, K
Published in: Biochim Biophys Acta Gen Subj
October 2023

The current methods for quantifying ligand bias involve the construction of bias plots and the calculations of bias coefficients that can be compared using statistical methods. However, widely used bias coefficients can diverge in their abilities to identify ligand bias and can give false positives. As the empirical bias plots are considered the most reliable tools in bias identification, here we develop an analytical description of bias plot trajectories and introduce a bias coefficient, kappa, which is calculated from these trajectories. The new bias coefficient complements the tool-set in ligand bias identification in cell signaling research.

Duke Scholars

Published In

Biochim Biophys Acta Gen Subj

DOI

EISSN

1872-8006

Publication Date

October 2023

Volume

1867

Issue

10

Start / End Page

130428

Location

Netherlands

Related Subject Headings

  • Signal Transduction
  • Ligands
  • Biochemistry & Molecular Biology
  • Bias
  • 3101 Biochemistry and cell biology
  • 1115 Pharmacology and Pharmaceutical Sciences
  • 0601 Biochemistry and Cell Biology
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Karl, K., Rajagopal, S., & Hristova, K. (2023). Quantitative assessment of ligand bias from bias plots: The bias coefficient "kappa". Biochim Biophys Acta Gen Subj, 1867(10), 130428. https://doi.org/10.1016/j.bbagen.2023.130428
Karl, Kelly, Sudarshan Rajagopal, and Kalina Hristova. “Quantitative assessment of ligand bias from bias plots: The bias coefficient "kappa".Biochim Biophys Acta Gen Subj 1867, no. 10 (October 2023): 130428. https://doi.org/10.1016/j.bbagen.2023.130428.
Karl K, Rajagopal S, Hristova K. Quantitative assessment of ligand bias from bias plots: The bias coefficient "kappa". Biochim Biophys Acta Gen Subj. 2023 Oct;1867(10):130428.
Karl, Kelly, et al. “Quantitative assessment of ligand bias from bias plots: The bias coefficient "kappa".Biochim Biophys Acta Gen Subj, vol. 1867, no. 10, Oct. 2023, p. 130428. Pubmed, doi:10.1016/j.bbagen.2023.130428.
Karl K, Rajagopal S, Hristova K. Quantitative assessment of ligand bias from bias plots: The bias coefficient "kappa". Biochim Biophys Acta Gen Subj. 2023 Oct;1867(10):130428.
Journal cover image

Published In

Biochim Biophys Acta Gen Subj

DOI

EISSN

1872-8006

Publication Date

October 2023

Volume

1867

Issue

10

Start / End Page

130428

Location

Netherlands

Related Subject Headings

  • Signal Transduction
  • Ligands
  • Biochemistry & Molecular Biology
  • Bias
  • 3101 Biochemistry and cell biology
  • 1115 Pharmacology and Pharmaceutical Sciences
  • 0601 Biochemistry and Cell Biology