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Controlling Silicification on DNA Origami with Polynucleotide Brushes.

Publication ,  Journal Article
Wang, S; Lin, P-A; DeLuca, M; Zauscher, S; Arya, G; Ke, Y
Published in: Journal of the American Chemical Society
January 2024

DNA origami has been used as biotemplates for growing a range of inorganic materials to create novel organic-inorganic hybrid nanomaterials. Recently, the solution-based silicification of DNA has been used to grow thin silica shells on DNA origami. However, the silicification reaction is sensitive to the reaction conditions and often results in uncontrolled DNA origami aggregation, especially when growth of thicker silica layers is desired. Here, we investigated how site-specifically placed polynucleotide brushes influence the silicification of DNA origami. Our experiments showed that long DNA brushes, in the form of single- or double-stranded DNA, significantly suppress the aggregation of DNA origami during the silicification process. Furthermore, we found that double-stranded DNA brushes selectively promote silica growth on DNA origami surfaces. These observations were supported and explained by coarse-grained molecular dynamics simulations. This work provides new insights into our understanding of the silicification process on DNA and provides a powerful toolset for the development of novel DNA-based organic-inorganic nanomaterials.

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Published In

Journal of the American Chemical Society

DOI

EISSN

1520-5126

ISSN

0002-7863

Publication Date

January 2024

Volume

146

Issue

1

Start / End Page

358 / 367

Related Subject Headings

  • Silicon Dioxide
  • Polynucleotides
  • Nucleic Acid Conformation
  • Nanostructures
  • General Chemistry
  • DNA
  • 40 Engineering
  • 34 Chemical sciences
  • 03 Chemical Sciences
 

Citation

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Wang, S., Lin, P.-A., DeLuca, M., Zauscher, S., Arya, G., & Ke, Y. (2024). Controlling Silicification on DNA Origami with Polynucleotide Brushes. Journal of the American Chemical Society, 146(1), 358–367. https://doi.org/10.1021/jacs.3c09310
Wang, Shuang, Po-An Lin, Marcello DeLuca, Stefan Zauscher, Gaurav Arya, and Yonggang Ke. “Controlling Silicification on DNA Origami with Polynucleotide Brushes.Journal of the American Chemical Society 146, no. 1 (January 2024): 358–67. https://doi.org/10.1021/jacs.3c09310.
Wang S, Lin P-A, DeLuca M, Zauscher S, Arya G, Ke Y. Controlling Silicification on DNA Origami with Polynucleotide Brushes. Journal of the American Chemical Society. 2024 Jan;146(1):358–67.
Wang, Shuang, et al. “Controlling Silicification on DNA Origami with Polynucleotide Brushes.Journal of the American Chemical Society, vol. 146, no. 1, Jan. 2024, pp. 358–67. Epmc, doi:10.1021/jacs.3c09310.
Wang S, Lin P-A, DeLuca M, Zauscher S, Arya G, Ke Y. Controlling Silicification on DNA Origami with Polynucleotide Brushes. Journal of the American Chemical Society. 2024 Jan;146(1):358–367.
Journal cover image

Published In

Journal of the American Chemical Society

DOI

EISSN

1520-5126

ISSN

0002-7863

Publication Date

January 2024

Volume

146

Issue

1

Start / End Page

358 / 367

Related Subject Headings

  • Silicon Dioxide
  • Polynucleotides
  • Nucleic Acid Conformation
  • Nanostructures
  • General Chemistry
  • DNA
  • 40 Engineering
  • 34 Chemical sciences
  • 03 Chemical Sciences