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ULTRA-SR Challenge: Assessment of Ultrasound Localization and TRacking Algorithms for Super-Resolution Imaging.

Publication ,  Journal Article
Lerendegui, M; Riemer, K; Papageorgiou, G; Wang, B; Arthur, L; Chavignon, A; Zhang, T; Couture, O; Huang, P; Ashikuzzaman, M; Dencks, S ...
Published in: IEEE transactions on medical imaging
August 2024

With the widespread interest and uptake of super-resolution ultrasound (SRUS) through localization and tracking of microbubbles, also known as ultrasound localization microscopy (ULM), many localization and tracking algorithms have been developed. ULM can image many centimeters into tissue in-vivo and track microvascular flow non-invasively with sub-diffraction resolution. In a significant community effort, we organized a challenge, Ultrasound Localization and TRacking Algorithms for Super-Resolution (ULTRA-SR). The aims of this paper are threefold: to describe the challenge organization, data generation, and winning algorithms; to present the metrics and methods for evaluating challenge entrants; and to report results and findings of the evaluation. Realistic ultrasound datasets containing microvascular flow for different clinical ultrasound frequencies were simulated, using vascular flow physics, acoustic field simulation and nonlinear bubble dynamics simulation. Based on these datasets, 38 submissions from 24 research groups were evaluated against ground truth using an evaluation framework with six metrics, three for localization and three for tracking. In-vivo mouse brain and human lymph node data were also provided, and performance assessed by an expert panel. Winning algorithms are described and discussed. The publicly available data with ground truth and the defined metrics for both localization and tracking present a valuable resource for researchers to benchmark algorithms and software, identify optimized methods/software for their data, and provide insight into the current limits of the field. In conclusion, Ultra-SR challenge has provided benchmarking data and tools as well as direct comparison and insights for a number of the state-of-the art localization and tracking algorithms.

Duke Scholars

Published In

IEEE transactions on medical imaging

DOI

EISSN

1558-254X

ISSN

0278-0062

Publication Date

August 2024

Volume

43

Issue

8

Start / End Page

2970 / 2987

Related Subject Headings

  • Ultrasonography
  • Nuclear Medicine & Medical Imaging
  • Microbubbles
  • Mice
  • Lymph Nodes
  • Image Processing, Computer-Assisted
  • Humans
  • Brain
  • Animals
  • Algorithms
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Lerendegui, M., Riemer, K., Papageorgiou, G., Wang, B., Arthur, L., Chavignon, A., … Tang, M.-X. (2024). ULTRA-SR Challenge: Assessment of Ultrasound Localization and TRacking Algorithms for Super-Resolution Imaging. IEEE Transactions on Medical Imaging, 43(8), 2970–2987. https://doi.org/10.1109/tmi.2024.3388048
Lerendegui, Marcelo, Kai Riemer, Georgios Papageorgiou, Bingxue Wang, Lachlan Arthur, Arthur Chavignon, Tao Zhang, et al. “ULTRA-SR Challenge: Assessment of Ultrasound Localization and TRacking Algorithms for Super-Resolution Imaging.IEEE Transactions on Medical Imaging 43, no. 8 (August 2024): 2970–87. https://doi.org/10.1109/tmi.2024.3388048.
Lerendegui M, Riemer K, Papageorgiou G, Wang B, Arthur L, Chavignon A, et al. ULTRA-SR Challenge: Assessment of Ultrasound Localization and TRacking Algorithms for Super-Resolution Imaging. IEEE transactions on medical imaging. 2024 Aug;43(8):2970–87.
Lerendegui, Marcelo, et al. “ULTRA-SR Challenge: Assessment of Ultrasound Localization and TRacking Algorithms for Super-Resolution Imaging.IEEE Transactions on Medical Imaging, vol. 43, no. 8, Aug. 2024, pp. 2970–87. Epmc, doi:10.1109/tmi.2024.3388048.
Lerendegui M, Riemer K, Papageorgiou G, Wang B, Arthur L, Chavignon A, Zhang T, Couture O, Huang P, Ashikuzzaman M, Dencks S, Dunsby C, Helfield B, Jensen JA, Lisson T, Lowerison MR, Rivaz H, Samir AE, Schmitz G, Schoen S, van Sloun R, Song P, Stevens T, Yan J, Sboros V, Tang M-X. ULTRA-SR Challenge: Assessment of Ultrasound Localization and TRacking Algorithms for Super-Resolution Imaging. IEEE transactions on medical imaging. 2024 Aug;43(8):2970–2987.

Published In

IEEE transactions on medical imaging

DOI

EISSN

1558-254X

ISSN

0278-0062

Publication Date

August 2024

Volume

43

Issue

8

Start / End Page

2970 / 2987

Related Subject Headings

  • Ultrasonography
  • Nuclear Medicine & Medical Imaging
  • Microbubbles
  • Mice
  • Lymph Nodes
  • Image Processing, Computer-Assisted
  • Humans
  • Brain
  • Animals
  • Algorithms