Scholars@Duke

• Background
• 

  Education, Training, & Certifications

  • Ph.D., Emory University 1997
• 

  Previous Appointments & Affiliations

  • Professor in Biostatistics and Bioinformatics, Biostatistics & Bioinformatics, Basic Science Departments 2013 - 2020
  • Professor in Medicine, Medicine, Nephrology, Medicine 2014 - 2020
  • Faculty Fellow in the Center for Child and Family Policy, Center for Child and Family Policy, Sanford School of Public Policy 2015
  • Professor in Medicine, Medicine, Medical Genetics, Medicine 2013 - 2014
  • Assistant Professor in Biostatistics and Bioinformatics, Biostatistics & Bioinformatics, Basic Science Departments 2007 - 2013
  • Associate Professor in Medicine, Duke Molecular Physiology Institute, Duke Molecular Physiology Institute 2007 - 2013
  • Assistant Professor in Medicine, Duke Molecular Physiology Institute, Duke Molecular Physiology Institute 2006 - 2007
  • Assistant Research Professor in Biostatistics and Bioinformatics, Biostatistics & Bioinformatics, Basic Science Departments 2001 - 2007
  • Assistant Research Professor in Medicine, Duke Molecular Physiology Institute, Duke Molecular Physiology Institute 2001 - 2006
  • Instructor, Temporary of Medicine, Duke Molecular Physiology Institute, Duke Molecular Physiology Institute 2001
• Recognition
• 

  In the News

  • DEC 14, 2015

    Seattle Times

    How the state is missing chances to find deadly birth defect’s cause

  • DEC 14, 2015

    Seattle Times

    How the state is missing chances to find deadly birth defect’s cause
• Expertise
• 

  Global Scholarship

  • Expertise

    • United States of America (Country) 

  • Research

    • Guatemala (Country) 
    • United States of America (Country) 
• Research
• 

  Selected Grants

  • Hematology & Transfusion Medicine (T32) awarded by National Institutes of Health 1975 - 2026
  • Genetic and Genomics Training Grant awarded by National Institutes of Health 2020 - 2025
  • NINDS Research Education Programs for Residents and Fellows in Neurosurgery awarded by National Institutes of Health 2009 - 2025
  • Untangling the diversity in the genetic architecture of late-onset Alzheimer's disease using single cell multi-omics awarded by National Institutes of Health 2022 - 2025
  • RPE Exosomes in Age-related Macular Degeneration awarded by National Institutes of Health 2022 - 2025
  • Molecular Mechanisms of Exfoliation Glaucoma awarded by National Institutes of Health 2019 - 2024
  • Assessment of neural tube defects among newborns in Uganda: A study of prevalence, risk factors, and the role of gene-environmental interactions (NTDs in Uganda) awarded by National Institutes of Health 2022 - 2024
  • Epigenetic Age Acceleration and Psychoneurological Symptoms in Sickle Cell Disease awarded by National Institutes of Health 2022 - 2024
  • Genomic Architecture of Functional Brain Networks in PTSD awarded by National Institutes of Health 2017 - 2023
  • Identifying novel clinical, genetic and proteomic risk factors for sickle cell nephropathy. awarded by National Institutes of Health 2021 - 2023
  • A Phase II trial of topical sodium nitrite in patients with sickle cell disease and leg ulcers Cost Reimbursable awarded by Food and Drug Administration 2017 - 2022
  • Eyes of Africa: The Genetics of Blindness awarded by University of Ibadan 2017 - 2022
  • Modeling Sickle Cell Disease phenotypes through supervised learning of patient multi-omic data awarded by National Heart, Lung, and Blood Institute 2020 - 2021
  • Bioinformatics and Computational Biology Training Program awarded by National Institutes of Health 2005 - 2021
  • Sharing Comprehensive 'Omics in Sickle Cell Disease Through the NHLBI TOPMed Network awarded by Doris Duke Charitable Foundation, Inc. 2019 - 2020
  • Transcriptomic, therapeutic and genetic investigations of sickle cell nephropathy awarded by National Institutes of Health 2016 - 2020
  • Genetics Training Grant awarded by National Institutes of Health 1979 - 2020
  • MVP IPA - Allison Ashley-Koch awarded by Durham Veterans Affairs Medical Center 2019 - 2020
  • IPA--Allison Ashley-Koch awarded by Durham Veterans Affairs Medical Center 2018 - 2020
  • High-throughput Metabolite Profiling and Genetic Analyses to Identify Novel Predictive Biomarkers of SCD-related Complications awarded by Doris Duke Charitable Foundation 2015 - 2020
  • Genetic and Functional Studies of Human Ciliary Syndromes awarded by National Institutes of Health 2005 - 2019
  • Duke-UNC Clinical Hematology and Transfusion Research Career Development Program awarded by National Institutes of Health 2006 - 2019
  • Identification of Susceptibility Genes for Essential Tremor awarded by Columbia University 2015 - 2019
  • Decoding schizophrenia-From GWAS to functional regulatory variants awarded by National Institutes of Health 2014 - 2019
  • Behavioral and genetic mechanisms of smoking risk in individuals with ADHD awarded by National Institutes of Health 2012 - 2018
  • IPA - Allison Ashley-Koch awarded by Durham Veterans Affairs Medical Center 2016 - 2018
  • Linking ciliary biology to the functional annotation of psychiatric disorders awarded by National Institutes of Health 2016 - 2017
  • Genome-wide Association Analysis in the Neurocognitive Outcomes of Depression in the Elderly (NCODE) data set. awarded by University of Connecticut 2017
  • Genetic and Environmental Predictors of Combat-Related PTSD awarded by University of Texas Health Science Center at San Antonio 2015 - 2016
  • Extension of Hematologic & Clinical Genotype-Phenotype Associations in SCD Using Exome Chip & Metabolomic Analysis awarded by Doris Duke Charitable Foundation 2013 - 2015
  • Biorepository Core Lab for the PTSD-TBI Clinical Consortium awarded by University of California - San Diego 2009 - 2015
  • Imaging Genetic Predictors of Psychotherapy Outcomes in Unipolar Depression awarded by National Institutes of Health 2012 - 2015
  • Linkage and candidate gene analysis in non-syndromic Chiari type I awarded by National Institutes of Health 2009 - 2015
  • IPA - Allison Ashley-Koch awarded by Durham Veterans Affairs Medical Center 2012 - 2014
  • Neuropharmacology of Response Inhibition in Comorbid ADHD and Nicotine Dependence awarded by National Institutes of Health 2009 - 2014
  • Elucidating Outcome and Risk from Improved Exposure Assessment and Mechanistic Studies awarded by University of North Carolina - Chapel Hill 2011 - 2014
  • Admixture Mapping of Glaucoma Genes in African Americans awarded by National Institutes of Health 2008 - 2013
  • Genetic Contributions to Alterations in Brain Structure and Function in Depression awarded by National Institutes of Health 2008 - 2012
  • Genetic basis of smoking abstinence, smoking reinforcement, and inhibitory control awarded by National Institutes of Health 2009 - 2012
  • Recovery Act Funds for Administrative Supplements for Conte Center grant programs awarded by National Institutes of Health 2010 - 2011
  • Pulmonary Hypertension in SCD awarded by National Institutes of Health 2005 - 2011
  • Candidate Gene Analysis of Persistent AD/HD awarded by National Institutes of Health 2004 - 2010
  • Hereditary basis of neural tube defects awarded by National Institutes of Health 1999 - 2010
  • Outcome Modifying Genes in Sickle Cell Diseases awarded by National Institutes of Health 2001 - 2008
  • Molecular and Genetic Epidemiology of Autism awarded by National Institutes of Health 1997 - 2007
  • Molecular and genetic epidemiology of autism awarded by National Institutes of Health 1997 - 2007
  • Genetics and epidemiology of essential tremor awarded by National Institutes of Health 2002 - 2007
  • Stress, Serotonin Genes & Health Disparities awarded by National Institute of Environmental Health Science 2000 - 2006
• Publications & Artistic Works
• 

  Selected Publications

  • Academic Articles

    • Chen, Fang, Xingyan Wang, Seon-Kyeong Jang, Bryan C. Quach, J Dylan Weissenkampen, Chachrit Khunsriraksakul, Lina Yang, et al. “Multi-ancestry transcriptome-wide association analyses yield insights into tobacco use biology and drug repurposing.” Nat Genet, January 26, 2023. https://doi.org/10.1038/s41588-022-01282-x.
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    • Jang, Seon-Kyeong, Luke Evans, Allison Fialkowski, Donna K. Arnett, Allison E. Ashley-Koch, Kathleen C. Barnes, Diane M. Becker, et al. “Rare genetic variants explain missing heritability in smoking.” Nat Hum Behav 6, no. 11 (November 2022): 1577–86. https://doi.org/10.1038/s41562-022-01408-5.
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    • Knisely, Mitchell R., Qing Yang, Nic Stauffer, Martha Kenney, Allison Ashley-Koch, John Myers, Julia K. L. Walker, Paula J. Tanabe, and Nirmish R. Shah. “Evaluating Associations between Average Pain Intensity and Genetic Variation in People with Sickle Cell Disease: An Exploratory Study.” Pain Manag Nurs, September 9, 2022. https://doi.org/10.1016/j.pmn.2022.08.002.
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    • Ataga, Kenneth I., Qingning Zhou, Santosh L. Saraf, Jane S. Hankins, Emily J. Ciccone, Laura R. Loehr, Allison E. Ashley-Koch, et al. “Longitudinal study of glomerular hyperfiltration in adults with sickle cell anemia: a multicenter pooled analysis.” Blood Adv 6, no. 15 (August 9, 2022): 4461–70. https://doi.org/10.1182/bloodadvances.2022007693.
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    • Bountress, Kaitlin E., Leslie A. Brick, Christina Sheerin, Andrew Grotzinger, Daniel Bustamante, Sage E. Hawn, Nathan Gillespie, et al. “Alcohol use and alcohol use disorder differ in their genetic relationships with PTSD: A genomic structural equation modelling approach.” Drug Alcohol Depend 234 (May 1, 2022): 109430. https://doi.org/10.1016/j.drugalcdep.2022.109430.
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    • Kimbrel, Nathan A., Allison E. Ashley-Koch, Xue J. Qin, Jennifer H. Lindquist, Melanie E. Garrett, Michelle F. Dennis, Lauren P. Hair, et al. “A genome-wide association study of suicide attempts in the million veterans program identifies evidence of pan-ancestry and ancestry-specific risk loci.” Mol Psychiatry 27, no. 4 (April 2022): 2264–72. https://doi.org/10.1038/s41380-022-01472-3.
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    • Maihofer, Adam X., Karmel W. Choi, Jonathan R. I. Coleman, Nikolaos P. Daskalakis, Christy A. Denckla, Elizabeth Ketema, Rajendra A. Morey, et al. “Enhancing Discovery of Genetic Variants for Posttraumatic Stress Disorder Through Integration of Quantitative Phenotypes and Trauma Exposure Information.” Biol Psychiatry 91, no. 7 (April 1, 2022): 626–36. https://doi.org/10.1016/j.biopsych.2021.09.020.
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    • Trubetskoy, Vassily, Antonio F. Pardiñas, Ting Qi, Georgia Panagiotaropoulou, Swapnil Awasthi, Tim B. Bigdeli, Julien Bryois, et al. “Mapping genomic loci implicates genes and synaptic biology in schizophrenia.” Nature 604, no. 7906 (April 2022): 502–8. https://doi.org/10.1038/s41586-022-04434-5.
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    • Wainschtein, Pierrick, Deepti Jain, Zhili Zheng, Zhili TOPMed Anthropometry Working Group, Zhili NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium, L Adrienne Cupples, Aladdin H. Shadyab, et al. “Assessing the contribution of rare variants to complex trait heritability from whole-genome sequence data.” Nat Genet 54, no. 3 (March 2022): 263–73. https://doi.org/10.1038/s41588-021-00997-7.
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    • Liggett, L Alexander, Liam D. Cato, Joshua S. Weinstock, Yingze Zhang, S Mehdi Nouraie, Mark T. Gladwin, Melanie E. Garrett, et al. “Clonal hematopoiesis in sickle cell disease.” J Clin Invest 132, no. 4 (February 15, 2022). https://doi.org/10.1172/JCI156060.
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    • Mullins, Niamh, JooEun Kang, Adrian I. Campos, Jonathan R. I. Coleman, Alexis C. Edwards, Hanga Galfalvy, Daniel F. Levey, et al. “Dissecting the Shared Genetic Architecture of Suicide Attempt, Psychiatric Disorders, and Known Risk Factors.” Biol Psychiatry 91, no. 3 (February 1, 2022): 313–27. https://doi.org/10.1016/j.biopsych.2021.05.029.
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    • Taub, Margaret A., Matthew P. Conomos, Rebecca Keener, Kruthika R. Iyer, Joshua S. Weinstock, Lisa R. Yanek, John Lane, et al. “Genetic determinants of telomere length from 109,122 ancestrally diverse whole-genome sequences in TOPMed.” Cell Genom 2, no. 1 (January 12, 2022). https://doi.org/10.1016/j.xgen.2021.100084.
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    • Zheng, Yuanchao, Melanie E. Garrett, Delin Sun, Emily K. Clarke-Rubright, Courtney C. Haswell, Adam X. Maihofer, Jeremy A. Elman, et al. “Trauma and posttraumatic stress disorder modulate polygenic predictors of hippocampal and amygdala volume.” Transl Psychiatry 11, no. 1 (December 16, 2021): 637. https://doi.org/10.1038/s41398-021-01707-x.
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    • Gamache, J., J. Barrera, D. Gingerich, M. Garrett, D. Chipman, H. Fradin, A. Ashley-Koch, G. Crawford, and O. Chiba-Falek. “Parallel single-nucleus chromatin accessibility and transcriptomic profiling of human late-onset Alzheimer's disease brains.” Alzheimer’S &Amp; Dementia : The Journal of the Alzheimer’S Association 17 (December 1, 2021): e057261. https://doi.org/10.1002/alz.057261.
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    • Luo, Yang, Masahiro Kanai, Wanson Choi, Xinyi Li, Saori Sakaue, Kenichi Yamamoto, Kotaro Ogawa, et al. “Author Correction: A high-resolution HLA reference panel capturing global population diversity enables multi-ancestry fine-mapping in HIV host response.” Nat Genet 53, no. 12 (December 2021): 1722. https://doi.org/10.1038/s41588-021-00979-9.
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    • Luo, Yang, Masahiro Kanai, Wanson Choi, Xinyi Li, Saori Sakaue, Kenichi Yamamoto, Kotaro Ogawa, et al. “A high-resolution HLA reference panel capturing global population diversity enables multi-ancestry fine-mapping in HIV host response.” Nat Genet 53, no. 10 (October 2021): 1504–16. https://doi.org/10.1038/s41588-021-00935-7.
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    • Cade, Brian E., Jiwon Lee, Tamar Sofer, Heming Wang, Man Zhang, Han Chen, Sina A. Gharib, et al. “Whole-genome association analyses of sleep-disordered breathing phenotypes in the NHLBI TOPMed program.” Genome Med 13, no. 1 (August 26, 2021): 136. https://doi.org/10.1186/s13073-021-00917-8.
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    • Barrera, Julio, Lingyun Song, Julia E. Gamache, Melanie E. Garrett, Alexias Safi, Young Yun, Ivana Premasinghe, et al. “Sex dependent glial-specific changes in the chromatin accessibility landscape in late-onset Alzheimer's disease brains.” Mol Neurodegener 16, no. 1 (August 24, 2021): 58. https://doi.org/10.1186/s13024-021-00481-0.
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    • Liang, Dan, Angela L. Elwell, Nil Aygün, Oleh Krupa, Justin M. Wolter, Felix A. Kyere, Michael J. Lafferty, et al. “Cell-type-specific effects of genetic variation on chromatin accessibility during human neuronal differentiation.” Nature Neuroscience 24, no. 7 (July 2021): 941–53. https://doi.org/10.1038/s41593-021-00858-w.
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    • Hu, Benxia, Hyejung Won, Won Mah, Royce B. Park, Bibi Kassim, Keeley Spiess, Alexey Kozlenkov, et al. “Neuronal and glial 3D chromatin architecture informs the cellular etiology of brain disorders.” Nat Commun 12, no. 1 (June 25, 2021): 3968. https://doi.org/10.1038/s41467-021-24243-0.
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    • Keramati, Ali R., Ming-Huei Chen, Benjamin A. T. Rodriguez, Lisa R. Yanek, Arunoday Bhan, Brady J. Gaynor, Kathleen Ryan, et al. “Genome sequencing unveils a regulatory landscape of platelet reactivity.” Nat Commun 12, no. 1 (June 15, 2021): 3626. https://doi.org/10.1038/s41467-021-23470-9.
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    • Sofer, Tamar, Xiuwen Zheng, Cecelia A. Laurie, Stephanie M. Gogarten, Jennifer A. Brody, Matthew P. Conomos, Joshua C. Bis, et al. “Variant-specific inflation factors for assessing population stratification at the phenotypic variance level.” Nat Commun 12, no. 1 (June 9, 2021): 3506. https://doi.org/10.1038/s41467-021-23655-2.
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    • Ataga, Kenneth I., Qingning Zhou, Vimal K. Derebail, Santosh L. Saraf, Jane S. Hankins, Laura R. Loehr, Melanie E. Garrett, Allison E. Ashley-Koch, Jianwen Cai, and Marilyn J. Telen. “Rapid decline in estimated glomerular filtration rate in sickle cell anemia: results of a multicenter pooled analysis.” Haematologica 106, no. 6 (June 1, 2021): 1749–53. https://doi.org/10.3324/haematol.2020.267419.
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    • Kasela, Silva, Victor E. Ortega, Molly Martorella, Suresh Garudadri, Jenna Nguyen, Elizabeth Ampleford, Anu Pasanen, et al. “Genetic and non-genetic factors affecting the expression of COVID-19-relevant genes in the large airway epithelium.” Genome Med 13, no. 1 (April 21, 2021): 66. https://doi.org/10.1186/s13073-021-00866-2.
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    • Natarajan, Pradeep, Akhil Pampana, Sarah E. Graham, Sanni E. Ruotsalainen, James A. Perry, Paul S. de Vries, Jai G. Broome, et al. “Chromosome Xq23 is associated with lower atherogenic lipid concentrations and favorable cardiometabolic indices.” Nat Commun 12, no. 1 (April 12, 2021): 2182. https://doi.org/10.1038/s41467-021-22339-1.
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    • Wegermann, Kara, Melanie E. Garrett, Jiayin Zheng, Andrea Coviello, Cynthia A. Moylan, Manal F. Abdelmalek, Shein-Chung Chow, et al. “Sex and Menopause Modify the Effect of Single Nucleotide Polymorphism Genotypes on Fibrosis in NAFLD.” Hepatol Commun 5, no. 4 (April 2021): 598–607. https://doi.org/10.1002/hep4.1668.
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    • Sadler, Brooke, Jackson Wilborn, Lilian Antunes, Timothy Kuensting, Andrew T. Hale, Stephen R. Gannon, Kevin McCall, et al. “Rare and de novo coding variants in chromodomain genes in Chiari I malformation.” Am J Hum Genet 108, no. 3 (March 4, 2021): 530–31. https://doi.org/10.1016/j.ajhg.2021.01.014.
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    • Bick, Alexander G., Joshua S. Weinstock, Satish K. Nandakumar, Charles P. Fulco, Erik L. Bao, Seyedeh M. Zekavat, Mindy D. Szeto, et al. “Author Correction: Inherited causes of clonal haematopoiesis in 97,691 whole genomes.” Nature 591, no. 7851 (March 2021): E27. https://doi.org/10.1038/s41586-021-03280-1.
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    • Brummett, Beverly H., Christopher L. Muller, Ann L. Collins, Stephen H. Boyle, Cynthia M. Kuhn, Ilene C. Siegler, Redford B. Williams, Edward C. Suarez, and Allison Ashley-Koch. “Correction to: 5-HTTLPR and Gender Moderate Changes in Negative Affect Responses to Tryptophan Infusion.” Behav Genet 51, no. 2 (March 2021): 163. https://doi.org/10.1007/s10519-020-10030-y.
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    • Brummett, Beverly H., Stephen H. Boyle, Ilene C. Siegler, Cynthia M. Kuhn, Allison Ashley-Koch, Charles R. Jonassaint, Stephan Züchner, Ann Collins, Edward C. Suarez, and Redford B. Williams. “Correction to: Effects of Environmental Stress and Gender on Associations among Symptoms of Depression and the Serotonin Transporter Gene Linked Polymorphic Region (5-HTTLPR).” Behav Genet 51, no. 2 (March 2021): 162. https://doi.org/10.1007/s10519-020-10029-5.
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    • Au, K. S., L. Hebert, P. Hillman, C. Baker, M. R. Brown, D. -. K. Kim, K. Soldano, et al. “Human myelomeningocele risk and ultra-rare deleterious variants in genes associated with cilium, WNT-signaling, ECM, cytoskeleton and cell migration.” Sci Rep 11, no. 1 (February 11, 2021): 3639. https://doi.org/10.1038/s41598-021-83058-7.
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    • Sadler, Brooke, Jackson Wilborn, Lilian Antunes, Timothy Kuensting, Andrew T. Hale, Stephen R. Gannon, Kevin McCall, et al. “Rare and de novo coding variants in chromodomain genes in Chiari I malformation.” Am J Hum Genet 108, no. 2 (February 4, 2021): 368. https://doi.org/10.1016/j.ajhg.2020.12.015.
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    • Dinardo, Carla L., Theo G. M. Oliveira, Shannon Kelly, Allison Ashley-Koch, Marilyn Telen, Luciana C. Schmidt, Shirley Castilho, et al. “Diversity of variant alleles encoding Kidd, Duffy, and Kell antigens in individuals with sickle cell disease using whole genome sequencing data from the NHLBI TOPMed Program.” Transfusion 61, no. 2 (February 2021): 603–16. https://doi.org/10.1111/trf.16204.
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    • Ilboudo, Yann, Melanie E. Garrett, Pablo Bartolucci, Carlo Brugnara, Clary B. Clish, Joel N. Hirschhorn, Frédéric Galactéros, Allison E. Ashley-Koch, Marilyn J. Telen, and Guillaume Lettre. “Potential causal role of l-glutamine in sickle cell disease painful crises: A Mendelian randomization analysis.” Blood Cells Mol Dis 86 (February 2021): 102504. https://doi.org/10.1016/j.bcmd.2020.102504.
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    • Taliun, Daniel, Daniel N. Harris, Michael D. Kessler, Jedidiah Carlson, Zachary A. Szpiech, Raul Torres, Sarah A Gagliano Taliun, et al. “Sequencing of 53,831 diverse genomes from the NHLBI TOPMed Program.” Nature 590, no. 7845 (February 2021): 290–99. https://doi.org/10.1038/s41586-021-03205-y.
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    • Sadler, Brooke, Jackson Wilborn, Lilian Antunes, Timothy Kuensting, Andrew T. Hale, Stephen R. Gannon, Kevin McCall, et al. “Rare and de novo coding variants in chromodomain genes in Chiari I malformation.” Am J Hum Genet 108, no. 1 (January 7, 2021): 100–114. https://doi.org/10.1016/j.ajhg.2020.12.001.
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    • Sumner, Jennifer A., Adam X. Maihofer, Vasiliki Michopoulos, Alex O. Rothbaum, Lynn M. Almli, Ole A. Andreassen, Allison E. Ashley-Koch, et al. “Examining Individual and Synergistic Contributions of PTSD and Genetics to Blood Pressure: A Trans-Ethnic Meta-Analysis.” Front Neurosci 15 (2021): 678503. https://doi.org/10.3389/fnins.2021.678503.
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    • Garrett, Melanie E., Xue Jun Qin, Divya Mehta, Michelle F. Dennis, Christine E. Marx, Gerald A. Grant, Gerald A. VA Mid-Atlantic MIRECC Workgroup, et al. “Gene Expression Analysis in Three Posttraumatic Stress Disorder Cohorts Implicates Inflammation and Innate Immunity Pathways and Uncovers Shared Genetic Risk With Major Depressive Disorder.” Front Neurosci 15 (2021): 678548. https://doi.org/10.3389/fnins.2021.678548.
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    • Liggett, Alexander, Liam Cato, Joshua Weinstock, Yingze Zhang, Seyed Mehdi Nouraie, Mark Gladwin, Melanie Garrett, et al. “Clonal hematopoiesis in sickle cell disease,” 2021. https://doi.org/10.1101/2021.06.12.21258772.
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    • Urbizu, Aintzane, Melanie E. Garrett, Karen Soldano, Oliver Drechsel, Dorothy Loth, Anna Marcé-Grau, Olga Mestres I Soler, et al. “Rare functional genetic variants in COL7A1, COL6A5, COL1A2 and COL5A2 frequently occur in Chiari Malformation Type 1.” Plos One 16, no. 5 (2021): e0251289. https://doi.org/10.1371/journal.pone.0251289.
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    • Nielsen, Jonas B., Oren Rom, Ida Surakka, Sarah E. Graham, Wei Zhou, Tanmoy Roychowdhury, Lars G. Fritsche, et al. “Loss-of-function genomic variants highlight potential therapeutic targets for cardiovascular disease.” Nat Commun 11, no. 1 (December 18, 2020): 6417. https://doi.org/10.1038/s41467-020-20086-3.
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    • Smith, Alicia K., Andrew Ratanatharathorn, Adam X. Maihofer, Robert K. Naviaux, Allison E. Aiello, Ananda B. Amstadter, Allison E. Ashley-Koch, et al. “Epigenome-wide meta-analysis of PTSD across 10 military and civilian cohorts identifies methylation changes in AHRR.” Nat Commun 11, no. 1 (November 24, 2020): 5965. https://doi.org/10.1038/s41467-020-19615-x.
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    • Monroe, Tanner O., Melanie E. Garrett, Maria Kousi, Ramona M. Rodriguiz, Sungjin Moon, Yushi Bai, Steven C. Brodar, et al. “PCM1 is necessary for focal ciliary integrity and is a candidate for severe schizophrenia.” Nat Commun 11, no. 1 (November 19, 2020): 5903. https://doi.org/10.1038/s41467-020-19637-5.
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    • Hillman, Paul, Craig Baker, Luke Hebert, Michael Brown, James Hixson, Allison Ashley-Koch, Alanna C. Morrison, Hope Northrup, and Kit Sing Au. “Identification of novel candidate risk genes for myelomeningocele within the glucose homeostasis/oxidative stress and folate/one-carbon metabolism networks.” Mol Genet Genomic Med 8, no. 11 (November 2020): e1495. https://doi.org/10.1002/mgg3.1495.
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    • Bick, Alexander G., Joshua S. Weinstock, Satish K. Nandakumar, Charles P. Fulco, Erik L. Bao, Seyedeh M. Zekavat, Mindy D. Szeto, et al. “Inherited causes of clonal haematopoiesis in 97,691 whole genomes.” Nature 586, no. 7831 (October 2020): 763–68. https://doi.org/10.1038/s41586-020-2819-2.
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    • Hofer, Edith, Gennady V. Roshchupkin, Hieab H. H. Adams, Maria J. Knol, Honghuang Lin, Shuo Li, Habil Zare, et al. “Genetic correlations and genome-wide associations of cortical structure in general population samples of 22,824 adults.” Nat Commun 11, no. 1 (September 22, 2020): 4796. https://doi.org/10.1038/s41467-020-18367-y.
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    • Li, Xihao, Zilin Li, Hufeng Zhou, Sheila M. Gaynor, Yaowu Liu, Han Chen, Ryan Sun, et al. “Dynamic incorporation of multiple in silico functional annotations empowers rare variant association analysis of large whole-genome sequencing studies at scale.” Nat Genet 52, no. 9 (September 2020): 969–83. https://doi.org/10.1038/s41588-020-0676-4.
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    • Morey, Rajendra A., Melanie E. Garrett, Jennifer S. Stevens, Emily K. Clarke, Courtney C. Haswell, Sanne J. H. van Rooij, Negar Fani, et al. “Genetic predictors of hippocampal subfield volume in PTSD cases and trauma-exposed controls.” Eur J Psychotraumatol 11, no. 1 (July 29, 2020): 1785994. https://doi.org/10.1080/20008198.2020.1785994.
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    • Steffens, D. C., M. E. Garrett, K. L. Soldano, D. R. McQuoid, A. E. Ashley-Koch, and G. G. Potter. “Genome-wide screen to identify genetic loci associated with cognitive decline in late-life depression.” Int Psychogeriatr, July 9, 2020, 1–9. https://doi.org/10.1017/S1041610220001143.
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    • Worley, Gordon, Stephen W. Erickson, Kathryn E. Gustafson, Yuliya S. Nikolova, Allison E. Ashley-Koch, Daniel W. Belsky, Ricki F. Goldstein, Grier P. Page, C Michael Cotten, and C Michael Eunice Kennedy Shriver National Institute of Child Health and Human Development Neonatal Research Network. “Genetic variation in dopamine neurotransmission and motor development of infants born extremely-low-birthweight.” Dev Med Child Neurol 62, no. 6 (June 2020): 750–57. https://doi.org/10.1111/dmcn.14383.
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    • Zekavat, Seyedeh M., Sanni Ruotsalainen, Robert E. Handsaker, Maris Alver, Jonathan Bloom, Timothy Poterba, Cotton Seed, et al. “Publisher Correction: Deep coverage whole genome sequences and plasma lipoprotein(a) in individuals of European and African ancestries.” Nat Commun 11, no. 1 (April 1, 2020): 1715. https://doi.org/10.1038/s41467-020-15236-6.
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    • Torres, Olga, Jorge Matute, Janee Gelineau-van Waes, Joyce R. Maddox, Simon G. Gregory, Allison E. Ashley-Koch, Jency L. Showker, Nicholas C. Zitomer, Kenneth A. Voss, and Ronald T. Riley. “Urinary fumonisin B1 and estimated fumonisin intake in women from high- and low-exposure communities in Guatemala.” Mol Nutr Food Res 58, no. 5 (May 2014): 973–83. https://doi.org/10.1002/mnfr.201300481.
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    • Moylan, Cynthia A., Herbert Pang, Andrew Dellinger, Ayako Suzuki, Melanie E. Garrett, Cynthia D. Guy, Susan K. Murphy, et al. “Hepatic gene expression profiles differentiate presymptomatic patients with mild versus severe nonalcoholic fatty liver disease.” Hepatology 59, no. 2 (February 2014): 471–82. https://doi.org/10.1002/hep.26661.
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    • Sanders, Alison P., Lisa Smeester, Daniel Rojas, Tristan DeBussycher, Michael C. Wu, Fred A. Wright, Yi-Hui Zhou, et al. “Cadmium exposure and the epigenome: Exposure-associated patterns of DNA methylation in leukocytes from mother-baby pairs.” Epigenetics 9, no. 2 (February 2014): 212–21. https://doi.org/10.4161/epi.26798.
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    • Damiano, Cara R., Joseph Aloi, Kaitlyn Dunlap, Caley J. Burrus, Maya G. Mosner, Rachel V. Kozink, Ralph Edward McLaurin, et al. “Association between the oxytocin receptor (OXTR) gene and mesolimbic responses to rewards.” Mol Autism 5, no. 1 (January 31, 2014): 7. https://doi.org/10.1186/2040-2392-5-7.
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    • Carnes, Megan Ulmer, Yangfan P. Liu, R Rand Allingham, Benjamin T. Whigham, Shane Havens, Melanie E. Garrett, Chunyan Qiao, et al. “Discovery and functional annotation of SIX6 variants in primary open-angle glaucoma.” Plos Genet 10, no. 5 (2014): e1004372. https://doi.org/10.1371/journal.pgen.1004372.
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    • Markunas, Christina A., David S. Enterline, Kaitlyn Dunlap, Karen Soldano, Heidi Cope, Jeffrey Stajich, Gerald Grant, Herbert Fuchs, Simon G. Gregory, and Allison E. Ashley-Koch. “Genetic evaluation and application of posterior cranial fossa traits as endophenotypes for Chiari type I malformation.” Ann Hum Genet 78, no. 1 (January 2014): 1–12. https://doi.org/10.1111/ahg.12041.
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    • Ozel, A Bilge, Sayoko E. Moroi, David M. Reed, Melisa Nika, Caroline M. Schmidt, Sara Akbari, Kathleen Scott, et al. “Genome-wide association study and meta-analysis of intraocular pressure.” Hum Genet 133, no. 1 (January 2014): 41–57. https://doi.org/10.1007/s00439-013-1349-5.
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    • Lee, Chien-Ti, Bernard F. Fuemmeler, F Joseph McClernon, Allison Ashley-Koch, and Scott H. Kollins. “Nicotinic receptor gene variants interact with attention deficient hyperactive disorder symptoms to predict smoking trajectories from early adolescence to adulthood.” Addict Behav 38, no. 11 (November 2013): 2683–89. https://doi.org/10.1016/j.addbeh.2013.06.013.
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    • Murphy, Susan K., Hyuna Yang, Cynthia A. Moylan, Herbert Pang, Andrew Dellinger, Manal F. Abdelmalek, Melanie E. Garrett, et al. “Relationship between methylome and transcriptome in patients with nonalcoholic fatty liver disease.” Gastroenterology 145, no. 5 (November 2013): 1076–87. https://doi.org/10.1053/j.gastro.2013.07.047.
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    • Soldano, Karen L., Melanie E. Garrett, Heidi L. Cope, J Michael Rusnak, Nathen J. Ellis, Kaitlyn L. Dunlap, Marcy C. Speer, Simon G. Gregory, and Allison E. Ashley-Koch. “Genetic association analyses of nitric oxide synthase genes and neural tube defects vary by phenotype.” Birth Defects Res B Dev Reprod Toxicol 98, no. 5 (October 2013): 365–73. https://doi.org/10.1002/bdrb.21079.
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    • Liu, Yutao, R Rand Allingham, Xuejun Qin, David Layfield, Andrew E. Dellinger, Jason Gibson, Joshua Wheeler, Allison E. Ashley-Koch, W Daniel Stamer, and Michael A. Hauser. “Gene expression profile in human trabecular meshwork from patients with primary open-angle glaucoma.” Invest Ophthalmol Vis Sci 54, no. 9 (September 27, 2013): 6382–89. https://doi.org/10.1167/iovs.13-12128.
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    • Liu, Yutao, Michael A. Hauser, Stephen K. Akafo, Xuejun Qin, Shiroh Miura, Jason R. Gibson, Joshua Wheeler, et al. “Investigation of known genetic risk factors for primary open angle glaucoma in two populations of African ancestry.” Invest Ophthalmol Vis Sci 54, no. 9 (September 17, 2013): 6248–54. https://doi.org/10.1167/iovs.13-12779.
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    • Williamson, Dhelia M., Ruth Ann Marrie, Allison Ashley-Koch, and Glen A. Satten. “Interaction of HLA-DRB1*1501 and TNF-Alpha in a Population-based Case-control Study of Multiple Sclerosis.” Immunol Infect Dis 1, no. 1 (September 2013): 10–17. https://doi.org/10.13189/iid.2013.010102.
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    • Jamerson, Brenda D., Martha E. Payne, Melanie E. Garrett, Allison E. Ashley-Koch, Marcy C. Speer, and David C. Steffens. “Folate metabolism genes, dietary folate and response to antidepressant medications in late-life depression.” Int J Geriatr Psychiatry 28, no. 9 (September 2013): 925–32. https://doi.org/10.1002/gps.3899.
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    • Galarneau, Geneviève, Sean Coady, Melanie E. Garrett, Neal Jeffries, Mona Puggal, Dina Paltoo, Karen Soldano, et al. “Gene-centric association study of acute chest syndrome and painful crisis in sickle cell disease patients.” Blood 122, no. 3 (July 18, 2013): 434–42. https://doi.org/10.1182/blood-2013-01-478776.
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    • Zhu, Bin, Allison E. Ashley-Koch, and David B. Dunson. “Generalized admixture mapping for complex traits.” G3 (Bethesda) 3, no. 7 (July 8, 2013): 1165–75. https://doi.org/10.1534/g3.113.006478.
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    • Cope, Heidi, Kelly McMahon, Elizabeth Heise, Sonja Eubanks, Melanie Garrett, Simon Gregory, and Allison Ashley-Koch. “Outcome and life satisfaction of adults with myelomeningocele.” Disabil Health J 6, no. 3 (July 2013): 236–43. https://doi.org/10.1016/j.dhjo.2012.12.003.
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    • Liu, Yutao, Jacqueline Rimmler, Michelle F. Dennis, Allison E. Ashley-Koch, Michael A. Hauser, Michael A. Mid-Atlantic Mental Illness Research Education and Clinical Center Workgroup, and Jean C. Beckham. “Association of Variant rs4790904 in Protein Kinase C Alpha with Posttraumatic Stress Disorder in a U.S. Caucasian and African-American Veteran Sample.” J Depress Anxiety 2, no. 1 (June 1, 2013): S4001. https://doi.org/10.4172/2167-1044.s4-001.
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    • Zannas, Anthony S., Douglas R. McQuoid, Martha E. Payne, David C. Steffens, James R. MacFall, Allison Ashley-Koch, and Warren D. Taylor. “Negative life stress and longitudinal hippocampal volume changes in older adults with and without depression.” J Psychiatr Res 47, no. 6 (June 2013): 829–34. https://doi.org/10.1016/j.jpsychires.2013.02.008.
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    • Garrett, Melanie E., Manal F. Abdelmalek, Allison Ashley-Koch, Michael A. Hauser, Cynthia A. Moylan, Herbert Pang, Anna Mae Diehl, and Hans L. Tillmann. “IL28B rs12979860 is not associated with histologic features of NAFLD in a cohort of Caucasian North American patients.” J Hepatol 58, no. 2 (February 2013): 402–3. https://doi.org/10.1016/j.jhep.2012.09.035.
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    • Lu, Yi, Veronique Vitart, Kathryn P. Burdon, Chiea Chuen Khor, Yelena Bykhovskaya, Alireza Mirshahi, Alex W. Hewitt, et al. “Genome-wide association analyses identify multiple loci associated with central corneal thickness and keratoconus.” Nat Genet 45, no. 2 (February 2013): 155–63. https://doi.org/10.1038/ng.2506.
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    • Taylor, Warren D., Zheen Zhao, Allison Ashley-Koch, Martha E. Payne, David C. Steffens, Ranga R. Krishnan, Elizabeth Hauser, and James R. MacFall. “Fiber tract-specific white matter lesion severity Findings in late-life depression and by AGTR1 A1166C genotype.” Hum Brain Mapp 34, no. 2 (February 2013): 295–303. https://doi.org/10.1002/hbm.21445.
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    • Horstick, Eric J., Jeremy W. Linsley, James J. Dowling, Michael A. Hauser, Kristin K. McDonald, Allison Ashley-Koch, Louis Saint-Amant, et al. “Stac3 is a component of the excitation-contraction coupling machinery and mutated in Native American myopathy.” Nat Commun 4 (2013): 1952. https://doi.org/10.1038/ncomms2952.
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    • Markunas, Christina A., Karen Soldano, Kaitlyn Dunlap, Heidi Cope, Edgar Asiimwe, Jeffrey Stajich, David Enterline, et al. “Stratified whole genome linkage analysis of Chiari type I malformation implicates known Klippel-Feil syndrome genes as putative disease candidates.” Plos One 8, no. 4 (2013): e61521. https://doi.org/10.1371/journal.pone.0061521.
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    • Zhu, Bin, David B. Dunson, and Allison E. Ashley-Koch. “Adverse subpopulation regression for multivariate outcomes with high-dimensional predictors.” Stat Med 31, no. 29 (December 20, 2012): 4102–13. https://doi.org/10.1002/sim.5520.
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    • Jonassaint, Charles R., Allison Ashley-Koch, Keith E. Whitfield, Rick H. Hoyle, Laura Smart Richman, Ilene C. Siegler, Charmaine D. Royal, and Redford Williams. “The serotonin transporter gene polymorphism (5HTTLPR) moderates the effect of adolescent environmental conditions on self-esteem in young adulthood: a structural equation modeling approach.” Biol Psychol 91, no. 1 (September 2012): 111–19. https://doi.org/10.1016/j.biopsycho.2012.05.004.
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    • Williamson, D. M., R. A. Marrie, A. Ashley-Koch, R. Schiffer, J. Trottier, and L. Wagner. “Design, methodological issues and participation in a multiple sclerosis case-control study.” Acta Neurol Scand 126, no. 3 (September 2012): 197–204. https://doi.org/10.1111/j.1600-0404.2011.01629.x.
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    • Krupp, Deidre R., Pu-Ting Xu, Sophie Thomas, Andrew Dellinger, Heather C. Etchevers, Michel Vekemans, John R. Gilbert, et al. “Transcriptome profiling of genes involved in neural tube closure during human embryonic development using long serial analysis of gene expression (long-SAGE).” Birth Defects Res a Clin Mol Teratol 94, no. 9 (September 2012): 683–92. https://doi.org/10.1002/bdra.23040.
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    • Riley, Ronald T., Olga Torres, Jency L. Showker, Nicholas C. Zitomer, Jorge Matute, Kenneth A. Voss, Janee Gelineau-van Waes, Joyce R. Maddox, Simon G. Gregory, and Allison E. Ashley-Koch. “The kinetics of urinary fumonisin B1 excretion in humans consuming maize-based diets.” Mol Nutr Food Res 56, no. 9 (September 2012): 1445–55. https://doi.org/10.1002/mnfr.201200166.
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    • Bae, Harold T., Clinton T. Baldwin, Paola Sebastiani, Marilyn J. Telen, Allison Ashley-Koch, Melanie Garrett, W Craig Hooper, et al. “Meta-analysis of 2040 sickle cell anemia patients: BCL11A and HBS1L-MYB are the major modifiers of HbF in African Americans.” Blood 120, no. 9 (August 30, 2012): 1961–62. https://doi.org/10.1182/blood-2012-06-432849.
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    • Ulmer, Megan, Jun Li, Brian L. Yaspan, Ayse Bilge Ozel, Julia E. Richards, Sayoko E. Moroi, Felicia Hawthorne, et al. “Genome-wide analysis of central corneal thickness in primary open-angle glaucoma cases in the NEIGHBOR and GLAUGEN consortia.” Invest Ophthalmol Vis Sci 53, no. 8 (July 3, 2012): 4468–74. https://doi.org/10.1167/iovs.12-9784.
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    • Taylor, Warren D., Sophiya Benjamin, Douglas R. McQuoid, Martha E. Payne, Ranga R. Krishnan, James R. MacFall, and Allison Ashley-Koch. “AGTR1 gene variation: association with depression and frontotemporal morphology.” Psychiatry Res 202, no. 2 (May 31, 2012): 104–9. https://doi.org/10.1016/j.pscychresns.2012.03.007.
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    • Wang, L., A. Ashley-Koch, D. C. Steffens, K. R. R. Krishnan, and W. D. Taylor. “Impact of BDNF Val66Met and 5-HTTLPR polymorphism variants on neural substrates related to sadness and executive function.” Genes Brain Behav 11, no. 3 (April 2012): 352–59. https://doi.org/10.1111/j.1601-183X.2012.00764.x.
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    • Markunas, Christina A., R Shane Tubbs, Roham Moftakhar, Allison E. Ashley-Koch, Simon G. Gregory, W Jerry Oakes, Marcy C. Speer, and Bermans J. Iskandar. “Clinical, radiological, and genetic similarities between patients with Chiari Type I and Type 0 malformations.” J Neurosurg Pediatr 9, no. 4 (April 2012): 372–78. https://doi.org/10.3171/2011.12.PEDS11113.
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    • Bidwell, L Cinnamon, Melanie E. Garrett, F Joseph McClernon, Bernard F. Fuemmeler, Redford B. Williams, Allison E. Ashley-Koch, and Scott H. Kollins. “A preliminary analysis of interactions between genotype, retrospective ADHD symptoms, and initial reactions to smoking in a sample of young adults.” Nicotine Tob Res 14, no. 2 (February 2012): 229–33. https://doi.org/10.1093/ntr/ntr125.
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    • McDonald, Kristin K., Jeffrey Stajich, Colette Blach, Allison E. Ashley-Koch, and Michael A. Hauser. “Exome analysis of two limb-girdle muscular dystrophy families: mutations identified and challenges encountered.” Plos One 7, no. 11 (2012): e48864. https://doi.org/10.1371/journal.pone.0048864.
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    • Teh, Cheryl Ann, Tih-Shih Lee, Margaratha Kuchibhatla, Allison Ashley-Koch, James Macfall, Ranga Krishnan, and John Beyer. “Bipolar disorder, brain-derived neurotrophic factor (BDNF) Val66Met polymorphism and brain morphology.” Plos One 7, no. 7 (2012): e38469. https://doi.org/10.1371/journal.pone.0038469.
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    • Liu, Yutao, Benjamin T. Whigham, Joshua Wheeler, Susan E. I. Williams, Robyn M. Rautenbach, Ari Ziskind, Michele Ramsay, et al. “The role of lysyl oxidase-like 1 DNA copy number variants in exfoliation glaucoma.” Mol Vis 18 (2012): 2976–81.
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    • Milton, Jacqueline N., Paola Sebastiani, Nadia Solovieff, Stephen W. Hartley, Pallav Bhatnagar, Dan E. Arking, Daniel A. Dworkis, et al. “A genome-wide association study of total bilirubin and cholelithiasis risk in sickle cell anemia.” Plos One 7, no. 4 (2012): e34741. https://doi.org/10.1371/journal.pone.0034741.
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    • Sullivan, P., and P. 96 Psychiatric Genetics Investigators. “Don't give up on GWAS.” Mol Psychiatry 17, no. 1 (January 2012): 2–3. https://doi.org/10.1038/mp.2011.94.
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    • Ashley-Koch, Allison E., Emmanuel C. Okocha, Melanie E. Garrett, Karen Soldano, Laura M. De Castro, Jude C. Jonassaint, Eugene P. Orringer, James R. Eckman, and Marilyn J. Telen. “MYH9 and APOL1 are both associated with sickle cell disease nephropathy.” Br J Haematol 155, no. 3 (November 2011): 386–94. https://doi.org/10.1111/j.1365-2141.2011.08832.x.
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    • Anastopoulos, Arthur D., Taylor F. Smith, Melanie E. Garrett, Erin Morrissey-Kane, Nicole K. Schatz, Jennifer L. Sommer, Scott H. Kollins, and Allison Ashley-Koch. “Self-Regulation of Emotion, Functional Impairment, and Comorbidity Among ChildrenWith AD/HD.” J Atten Disord 15, no. 7 (October 2011): 583–92. https://doi.org/10.1177/1087054710370567.
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    • Swamy, Geeta K., Melanie E. Garrett, Marie Lynn Miranda, and Allison E. Ashley-Koch. “Maternal vitamin D receptor genetic variation contributes to infant birthweight among black mothers.” Am J Med Genet A 155A, no. 6 (June 2011): 1264–71. https://doi.org/10.1002/ajmg.a.33583.
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    • Brummett, Beverly H., Ilene C. Siegler, Allison Ashley-Koch, and Redford B. Williams. “Effects of 5HTTLPR on cardiovascular response to an emotional stressor.” Psychosom Med 73, no. 4 (May 2011): 318–22. https://doi.org/10.1097/PSY.0b013e3182118c16.
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    • Taylor, W. D., D. R. McQuoid, A. Ashley-Koch, J. R. MacFall, J. Bridgers, R. R. Krishnan, and D. C. Steffens. “BDNF Val66Met genotype and 6-month remission rates in late-life depression.” Pharmacogenomics J 11, no. 2 (April 2011): 146–54. https://doi.org/10.1038/tpj.2010.12.
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    • Rizzi, Thais S., Alejandro Arias-Vasquez, Nanda Rommelse, Jonna Kuntsi, Richard Anney, Philip Asherson, Jan Buitelaar, et al. “The ATXN1 and TRIM31 genes are related to intelligence in an ADHD background: evidence from a large collaborative study totaling 4,963 subjects.” Am J Med Genet B Neuropsychiatr Genet 156, no. 2 (March 2011): 145–57. https://doi.org/10.1002/ajmg.b.31149.
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    • Williams, Redford B., Richard S. Surwit, Ilene C. Siegler, Allison E. Ashley-Koch, Ann L. Collins, Michael J. Helms, Anastasia Georgiades, et al. “Central nervous system serotonin and clustering of hostility, psychosocial, metabolic, and cardiovascular endophenotypes in men.” Psychosom Med 72, no. 7 (September 2010): 601–7. https://doi.org/10.1097/PSY.0b013e3181eb9d67.
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    • Taylor, W. D., D. C. Steffens, A. Ashley-Koch, M. E. Payne, J. R. MacFall, C. F. Potocky, and K. R. R. Krishnan. “Angiotensin receptor gene polymorphisms and 2-year change in hyperintense lesion volume in men.” Mol Psychiatry 15, no. 8 (August 2010): 816–22. https://doi.org/10.1038/mp.2009.26.
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    • Kring, Sofia I Iqbal, Beverly H. Brummett, John Barefoot, Melanie E. Garrett, Allison E. Ashley-Koch, Stephen H. Boyle, Ilene C. Siegler, Thorkild I. A. Sørensen, and Redford B. Williams. “Impact of psychological stress on the associations between apolipoprotein E variants and metabolic traits: findings in an American sample of caregivers and controls.” Psychosom Med 72, no. 5 (June 2010): 427–33. https://doi.org/10.1097/PSY.0b013e3181de30ad.
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    • Markunas, Christina A., Kaia S. Quinn, Ann L. Collins, Melanie E. Garrett, Ave M. Lachiewicz, Jennifer L. Sommer, Erin Morrissey-Kane, Scott H. Kollins, Arthur D. Anastopoulos, and Allison E. Ashley-Koch. “Genetic variants in SLC9A9 are associated with measures of attention-deficit/hyperactivity disorder symptoms in families.” Psychiatr Genet 20, no. 2 (April 2010): 73–81. https://doi.org/10.1097/YPG.0b013e3283351209.
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    • Solovieff, Nadia, Jacqueline N. Milton, Stephen W. Hartley, Richard Sherva, Paola Sebastiani, Daniel A. Dworkis, Elizabeth S. Klings, et al. “Fetal hemoglobin in sickle cell anemia: genome-wide association studies suggest a regulatory region in the 5' olfactory receptor gene cluster.” Blood 115, no. 9 (March 4, 2010): 1815–22. https://doi.org/10.1182/blood-2009-08-239517.
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    • Au, Kit Sing, Allison Ashley-Koch, and Hope Northrup. “Epidemiologic and genetic aspects of spina bifida and other neural tube defects.” Dev Disabil Res Rev 16, no. 1 (2010): 6–15. https://doi.org/10.1002/ddrr.93.
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    • Sebastiani, Paola, Nadia Solovieff, Stephen W. Hartley, Jacqueline N. Milton, Alberto Riva, Daniel A. Dworkis, Efthymia Melista, et al. “Genetic modifiers of the severity of sickle cell anemia identified through a genome-wide association study.” Am J Hematol 85, no. 1 (January 2010): 29–35. https://doi.org/10.1002/ajh.21572.
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    • Hong, Edmund D., Warren D. Taylor, Douglas R. McQuoid, Guy G. Potter, Martha E. Payne, Allison Ashley-Koch, and David C. Steffens. “Influence of the MTHFR C677T polymorphism on magnetic resonance imaging hyperintensity volume and cognition in geriatric depression.” Am J Geriatr Psychiatry 17, no. 10 (October 2009): 847–55. https://doi.org/10.1097/JGP.0b013e3181aad5b2.
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    • Payne, Martha E., Brenda D. Jamerson, Christopher F. Potocky, Allison E. Ashley-Koch, Marcy C. Speer, and David C. Steffens. “Natural food folate and late-life depression.” J Nutr Elder 28, no. 4 (October 2009): 348–58. https://doi.org/10.1080/01639360903417181.
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    • Pan, Chih-Chuan, Douglas R. McQuoid, Warren D. Taylor, Martha E. Payne, Allison Ashley-Koch, and David C. Steffens. “Association analysis of the COMT/MTHFR genes and geriatric depression: an MRI study of the putamen.” Int J Geriatr Psychiatry 24, no. 8 (August 2009): 847–55. https://doi.org/10.1002/gps.2206.
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    • Kollins, Scott H., Melanie E. Garrett, F Joseph McClernon, Ave M. Lachiewicz, Erin Morrissey-Kane, David FitzGerald, Ann L. Collins, Arthur D. Anastopoulos, and Allison E. Ashley-Koch. “Effects of postnatal parental smoking on parent and teacher ratings of ADHD and oppositional symptoms.” J Nerv Ment Dis 197, no. 6 (June 2009): 442–49. https://doi.org/10.1097/NMD.0b013e3181a61d9e.
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    • Fuemmeler, Bernard F., Tanya Agurs-Collins, F Joseph McClernon, Scott H. Kollins, Melanie E. Garrett, and Allison E. Ashley-Koch. “Interactions between genotype and depressive symptoms on obesity.” Behav Genet 39, no. 3 (May 2009): 296–305. https://doi.org/10.1007/s10519-009-9266-z.
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    • Afenyi-Annan, Araba, Allison Ashley-Koch, and Marilyn J. Telen. “Duffy (Fy), DARC, and neutropenia among women from the United States, Europe and the Caribbean.” Br J Haematol 145, no. 2 (April 2009): 266–67. https://doi.org/10.1111/j.1365-2141.2009.07588.x.
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    • Züchner, S., J. R. Wendland, A. E. Ashley-Koch, A. L. Collins, K. N. Tran-Viet, K. Quinn, K. C. Timpano, et al. “Multiple rare SAPAP3 missense variants in trichotillomania and OCD.” Mol Psychiatry 14, no. 1 (January 2009): 6–9. https://doi.org/10.1038/mp.2008.83.
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    • Kollins, S. H., A. D. Anastopoulos, A. M. Lachiewicz, D. FitzGerald, E. Morrissey-Kane, M. E. Garrett, S. L. Keatts, and A. E. Ashley-Koch. “SNPs in dopamine D2 receptor gene (DRD2) and norepinephrine transporter gene (NET) are associated with continuous performance task (CPT) phenotypes in ADHD children and their families.” Am J Med Genet B Neuropsychiatr Genet 147B, no. 8 (December 5, 2008): 1580–88. https://doi.org/10.1002/ajmg.b.30876.
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    • Silbermins, Damian, Laura M. De Castro, Allison E. Ashley-Koch, Jude C. Jonassaint, Melanie E. Garrett, James R. Eckman, Eugene P. Orringer, and Marilyn J. Telen. “Prolonged Survival despite High Disease Burden in Elderly (>= 55) Patients with Hb SS or Hb S beta 0 Thalassemia.” Blood 112, no. 11 (November 16, 2008): 264–264.
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    • Brummett, Beverly H., Stephen H. Boyle, Ilene C. Siegler, Cynthia M. Kuhn, Richard S. Surwit, Melanie E. Garrett, Ann Collins, Allison Ashley-Koch, and Redford B. Williams. “HPA axis function in male caregivers: effect of the monoamine oxidase-A gene promoter (MAOA-uVNTR).” Biol Psychol 79, no. 2 (October 2008): 250–55. https://doi.org/10.1016/j.biopsycho.2008.06.004.
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    • Adam, Soheir, Jude Jonassaint, Hillary Kruger, Melanie Kail, Eugene P. Orringer, James R. Eckman, Allison Ashley-Koch, Marilyn J. Telen, and Laura M. De Castro. “Surgical and obstetric outcomes in adults with sickle cell disease.” Am J Med 121, no. 10 (October 2008): 916–21. https://doi.org/10.1016/j.amjmed.2008.04.040.
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    • Deak, Kristen L., Deborah G. Siegel, Timothy M. George, Simon Gregory, Allison Ashley-Koch, Marcy C. Speer, and Marcy C. NTD Collaborative Group. “Further evidence for a maternal genetic effect and a sex-influenced effect contributing to risk for human neural tube defects.” Birth Defects Res a Clin Mol Teratol 82, no. 10 (October 2008): 662–69. https://doi.org/10.1002/bdra.20511.
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    • Brummett, Beverly H., Christopher L. Muller, Ann L. Collins, Stephen H. Boyle, Cynthia M. Kuhn, Ilene C. Siegler, Redford B. Williams, and Allison Ashley-Koch. “5-HTTLPR and gender moderate changes in negative affect responses to tryptophan infusion.” Behav Genet 38, no. 5 (September 2008): 476–83. https://doi.org/10.1007/s10519-008-9219-y.
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    • Ashley-Koch, Allison E., Laine Elliott, Melanie E. Kail, Laura M. De Castro, Jude Jonassaint, Terry L. Jackson, Jennifer Price, et al. “Identification of genetic polymorphisms associated with risk for pulmonary hypertension in sickle cell disease.” Blood 111, no. 12 (June 15, 2008): 5721–26. https://doi.org/10.1182/blood-2007-02-074849.
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    • Stamm, Demetra S., Deborah G. Siegel, Lorraine Mehltretter, Jessica J. Connelly, Alison Trott, Nathen Ellis, Victoria Zismann, et al. “Refinement of 2q and 7p loci in a large multiplex NTD family.” Birth Defects Res a Clin Mol Teratol 82, no. 6 (June 2008): 441–52. https://doi.org/10.1002/bdra.20462.
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    • Afenyi-Annan, Araba, Melanie Kail, Martha R. Combs, Eugene P. Orringer, Allison Ashley-Koch, and Marilyn J. Telen. “Lack of Duffy antigen expression is associated with organ damage in patients with sickle cell disease.” Transfusion 48, no. 5 (May 2008): 917–24. https://doi.org/10.1111/j.1537-2995.2007.01622.x.
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    • Eyler, Christine E., Terry Jackson, Laine E. Elliott, Laura M. De Castro, Jude Jonassaint, Allison Ashley-Koch, and Marilyn J. Telen. “beta(2)-Adrenergic receptor and adenylate cyclase gene polymorphisms affect sickle red cell adhesion.” Br J Haematol 141, no. 1 (April 2008): 105–8. https://doi.org/10.1111/j.1365-2141.2008.07008.x.
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    • Brummett, Beverly H., Stephen H. Boyle, Ilene C. Siegler, Stephan Zuchner, Allison Ashley-Koch, and Redford B. Williams. “Lipid levels are associated with a regulatory polymorphism of the monoamine oxidase-A gene promoter (MAOA-uVNTR).” Med Sci Monit 14, no. 2 (February 2008): CR57–61.
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    • Fuemmeler, Bernard F., Tanya D. Agurs-Collins, F Joseph McClernon, Scott H. Kollins, Melanie E. Kail, Andrew W. Bergen, and Allison E. Ashley-Koch. “Genes implicated in serotonergic and dopaminergic functioning predict BMI categories.” Obesity (Silver Spring) 16, no. 2 (February 2008): 348–55. https://doi.org/10.1038/oby.2007.65.
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    • Brummett, Beverly H., Stephen H. Boyle, Ilene C. Siegler, Cynthia M. Kuhn, Allison Ashley-Koch, Charles R. Jonassaint, Stephan Züchner, Ann Collins, and Redford B. Williams. “Effects of environmental stress and gender on associations among symptoms of depression and the serotonin transporter gene linked polymorphic region (5-HTTLPR).” Behav Genet 38, no. 1 (January 2008): 34–43. https://doi.org/10.1007/s10519-007-9172-1.
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    • De Castro, Laura M., Jude C. Jonassaint, Felicia L. Graham, Allison Ashley-Koch, and Marilyn J. Telen. “Pulmonary hypertension associated with sickle cell disease: clinical and laboratory endpoints and disease outcomes.” Am J Hematol 83, no. 1 (January 2008): 19–25. https://doi.org/10.1002/ajh.21058.
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    • McClernon, F Joseph, Bernard F. Fuemmeler, Scott H. Kollins, Melanie E. Kail, and Allison E. Ashley-Koch. “Interactions between genotype and retrospective ADHD symptoms predict lifetime smoking risk in a sample of young adults.” Nicotine Tob Res 10, no. 1 (January 2008): 117–27. https://doi.org/10.1080/14622200701704913.
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    • Williams, Redford B., Douglas A. Marchuk, Ilene C. Siegler, John C. Barefoot, Michael J. Helms, Beverly H. Brummett, Richard S. Surwit, et al. “Childhood socioeconomic status and serotonin transporter gene polymorphism enhance cardiovascular reactivity to mental stress.” Psychosom Med 70, no. 1 (January 2008): 32–39. https://doi.org/10.1097/PSY.0b013e31815f66c3.
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    • Ashley-Koch, Allison E., James Jaworski, De Qiong Ma, Hao Mei, Marylyn D. Ritchie, David A. Skaar, G. Robert Delong, et al. “Investigation of potential gene-gene interactions between APOE and RELN contributing to autism risk.” Psychiatr Genet 17, no. 4 (August 2007): 221–26. https://doi.org/10.1097/YPG.0b013e32809c2f75.
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    • Beetz, Christian, Stephan Zuchner, Allison Ashley-Koch, Michaela Auer-Grumbach, Paula Byrne, Patrick F. Chinnery, Michael Hutchinson, et al. “Linkage to a known gene but no mutation identified: comprehensive reanalysis of SPG4 HSP pedigrees reveals large deletions as the sole cause.” Hum Mutat 28, no. 7 (July 2007): 739–40. https://doi.org/10.1002/humu.20508.
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    • Brummett, Beverly H., Andrew D. Krystal, Ilene C. Siegler, Cynthia Kuhn, Richard S. Surwit, Stephan Züchner, Allison Ashley-Koch, John C. Barefoot, and Redford B. Williams. “Associations of a regulatory polymorphism of monoamine oxidase-A gene promoter (MAOA-uVNTR) with symptoms of depression and sleep quality.” Psychosom Med 69, no. 5 (June 2007): 396–401. https://doi.org/10.1097/PSY.0b013e31806d040b.
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    • Schmidt, Hollie, Dhelia Williamson, and Allison Ashley-Koch. “HLA-DR15 haplotype and multiple sclerosis: a HuGE review.” Am J Epidemiol 165, no. 10 (May 15, 2007): 1097–1109. https://doi.org/10.1093/aje/kwk118.
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    • Elliott, Laine, Allison E. Ashley-Koch, Laura De Castro, Jude Jonassaint, Jennifer Price, Kenneth I. Ataga, Marc C. Levesque, et al. “Genetic polymorphisms associated with priapism in sickle cell disease.” Br J Haematol 137, no. 3 (May 2007): 262–67. https://doi.org/10.1111/j.1365-2141.2007.06560.x.
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    • Brummett, Beverly H., Andrew D. Krystal, Allison Ashley-Koch, Cynthia M. Kuhn, Stephan Züchner, Ilene C. Siegler, John C. Barefoot, Edna L. Ballard, Lisa P. Gwyther, and Redford B. Williams. “Sleep quality varies as a function of 5-HTTLPR genotype and stress.” Psychosom Med 69, no. 7 (2007): 621–24. https://doi.org/10.1097/PSY.0b013e31814b8de6.
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    • Elliott, Laine, Allison E. Ashley-Koch, Jude Jonassaint, Jennifer Price, Jason Galloway, Kenneth I. Ataga, Marc C. Levesque, et al. “Genetic polymorphisms associated with priapism in sickle cell disease.” Blood 108, no. 11 (November 16, 2006): 236A-237A.
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    • Zuchner, S., M. L. Cuccaro, K. N. Tran-Viet, H. Cope, R. R. Krishnan, M. A. Pericak-Vance, H. H. Wright, and A. Ashley-Koch. “SLITRK1 mutations in trichotillomania.” Mol Psychiatry 11, no. 10 (October 2006): 887–89. https://doi.org/10.1038/sj.mp.4001898.
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    • Züchner, Stephan, Gaofeng Wang, Khanh-Nhat Tran-Viet, Martha A. Nance, Perry C. Gaskell, Jeffery M. Vance, Allison E. Ashley-Koch, and Margaret A. Pericak-Vance. “Mutations in the novel mitochondrial protein REEP1 cause hereditary spastic paraplegia type 31.” Am J Hum Genet 79, no. 2 (August 2006): 365–69. https://doi.org/10.1086/505361.
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    • Ashley-Koch, A. E., H. Mei, J. Jaworski, D. Q. Ma, M. D. Ritchie, M. M. Menold, G. R. Delong, et al. “An analysis paradigm for investigating multi-locus effects in complex disease: examination of three GABA receptor subunit genes on 15q11-q13 as risk factors for autistic disorder.” Ann Hum Genet 70, no. Pt 3 (May 2006): 281–92. https://doi.org/10.1111/j.1469-1809.2006.00253.x.
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    • Rabionet, Raquel, Jacob L. McCauley, James M. Jaworski, Allison E. Ashley-Koch, Eden R. Martin, James S. Sutcliffe, Jonathan L. Haines, et al. “Lack of association between autism and SLC25A12.” Am J Psychiatry 163, no. 5 (May 2006): 929–31. https://doi.org/10.1176/ajp.2006.163.5.929.
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    • Züchner, Stephan, Melanie E. Kail, Martha A. Nance, Perry C. Gaskell, Ingrid K. Svenson, Douglas A. Marchuk, Margaret A. Pericak-Vance, and Allison E. Ashley-Koch. “A new locus for dominant hereditary spastic paraplegia maps to chromosome 2p12.” Neurogenetics 7, no. 2 (May 2006): 127–29. https://doi.org/10.1007/s10048-006-0029-1.
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    • Mei, Hao, Deqiong Ma, Allison Ashley-Koch, and Eden R. Martin. “Extension of multifactor dimensionality reduction for identifying multilocus effects in the GAW14 simulated data.” Bmc Genet 6 Suppl 1, no. Suppl 1 (December 30, 2005): S145. https://doi.org/10.1186/1471-2156-6-S1-S145.
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    • Ashley-Koch, A. “Determining Genetic Component of a Disease,” October 7, 2005, 91–115. https://doi.org/10.1002/9780471781141.ch3.
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    • Ma, D. Q., P. L. Whitehead, M. M. Menold, E. R. Martin, A. E. Ashley-Koch, H. Mei, M. D. Ritchie, et al. “Identification of significant association and gene-gene interaction of GABA receptor subunit genes in autism.” Am J Hum Genet 77, no. 3 (September 2005): 377–88. https://doi.org/10.1086/433195.
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    • Skaar, D. A., Y. Shao, J. L. Haines, J. E. Stenger, J. Jaworski, E. R. Martin, G. R. DeLong, et al. “Analysis of the RELN gene as a genetic risk factor for autism.” Mol Psychiatry 10, no. 6 (June 2005): 563–71. https://doi.org/10.1038/sj.mp.4001614.
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    • Ashley-Koch, A. E., Y. Shao, J. B. Rimmler, P. C. Gaskell, K. A. Welsh-Bohmer, C. E. Jackson, W. K. Scott, J. L. Haines, and M. A. Pericak-Vance. “An autosomal genomic screen for dementia in an extended Amish family.” Neurosci Lett 379, no. 3 (May 13, 2005): 199–204. https://doi.org/10.1016/j.neulet.2004.12.065.
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    • Boyles, Abee L., William K. Scott, Eden R. Martin, Silke Schmidt, Yi-Ju Li, Allison Ashley-Koch, Meredyth P. Bass, et al. “Linkage disequilibrium inflates type I error rates in multipoint linkage analysis when parental genotypes are missing.” Hum Hered 59, no. 4 (2005): 220–27. https://doi.org/10.1159/000087122.
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    • Rabionet, Raquel, James M. Jaworski, Allison E. Ashley-Koch, Eden R. Martin, James S. Sutcliffe, Jonathan L. Haines, G Robert Delong, et al. “Analysis of the autism chromosome 2 linkage region: GAD1 and other candidate genes.” Neurosci Lett 372, no. 3 (December 6, 2004): 209–14. https://doi.org/10.1016/j.neulet.2004.09.037.
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    • Svenson, Ingrid K., Mark T. Kloos, P Craig Gaskell, Martha A. Nance, James Y. Garbern, Shin-ichi Hisanaga, Margaret A. Pericak-Vance, Allison E. Ashley-Koch, and Douglas A. Marchuk. “Intragenic modifiers of hereditary spastic paraplegia due to spastin gene mutations.” Neurogenetics 5, no. 3 (September 2004): 157–64. https://doi.org/10.1007/s10048-004-0186-z.
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    • Rampersaud, Evadnie, Andrew Allen, Yi-Ju Li, Yujun Shao, Meredyth Bass, Carol Haynes, Allison Ashley-Koch, Eden R. Martin, Silke Schmidt, and Elizabeth R. Hauser. “Adjusting for covariates on a slippery slope: linkage analysis of change over time.” Bmc Genet 4 Suppl 1, no. Suppl 1 (December 31, 2003): S50. https://doi.org/10.1186/1471-2156-4-S1-S50.
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    • Yip, A. G., A. Dürr, D. A. Marchuk, A. Ashley-Koch, A. Hentati, D. C. Rubinsztein, and E. Reid. “Meta-analysis of age at onset in spastin-associated hereditary spastic paraplegia provides no evidence for a correlation with mutational class.” J Med Genet 40, no. 9 (September 2003): e106. https://doi.org/10.1136/jmg.40.9.e106.
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    • Carney, Regina M., Chantelle M. Wolpert, Sarah A. Ravan, Mona Shahbazian, Allison Ashley-Koch, Michael L. Cuccaro, Jeffery M. Vance, and Margaret A. Pericak-Vance. “Identification of MeCP2 mutations in a series of females with autistic disorder.” Pediatr Neurol 28, no. 3 (March 2003): 205–11. https://doi.org/10.1016/s0887-8994(02)00624-0.
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    • Reid, Evan, Mark Kloos, Allison Ashley-Koch, Lori Hughes, Simon Bevan, Ingrid K. Svenson, Felicia Lennon Graham, et al. “A kinesin heavy chain (KIF5A) mutation in hereditary spastic paraplegia (SPG10).” Am J Hum Genet 71, no. 5 (November 2002): 1189–94. https://doi.org/10.1086/344210.
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    • Lamb, S. E., H. P. Bartlett, A. Ashley, and W. Bird. “Can lay-led walking programmes increase physical activity in middle aged adults? A randomised controlled trial.” J Epidemiol Community Health 56, no. 4 (April 2002): 246–52. https://doi.org/10.1136/jech.56.4.246.
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    • Shao, Yujun, Kimberly L. Raiford, Chantelle M. Wolpert, Heidi A. Cope, Sarah A. Ravan, Allison A. Ashley-Koch, Ruth K. Abramson, et al. “Phenotypic homogeneity provides increased support for linkage on chromosome 2 in autistic disorder.” Am J Hum Genet 70, no. 4 (April 2002): 1058–61. https://doi.org/10.1086/339765.
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    • McCoy, Pinky A., Yujun Shao, Chantelle M. Wolpert, Shannon L. Donnelly, Allison Ashley-Koch, Heidi L. Abel, Sarah A. Ravan, et al. “No association between the WNT2 gene and autistic disorder.” Am J Med Genet 114, no. 1 (January 8, 2002): 106–9. https://doi.org/10.1002/ajmg.10182.
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    • Shao, Yujun, Chantelle M. Wolpert, Kimberly L. Raiford, Marisa M. Menold, Shannon L. Donnelly, Sarah A. Ravan, Meredyth P. Bass, et al. “Genomic screen and follow-up analysis for autistic disorder.” Am J Med Genet 114, no. 1 (January 8, 2002): 99–105. https://doi.org/10.1002/ajmg.10153.
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    • Svenson, I. K., A. E. Ashley-Koch, M. A. Pericak-Vance, and D. A. Marchuk. “A second leaky splice-site mutation in the spastin gene.” Am J Hum Genet 69, no. 6 (December 2001): 1407–9. https://doi.org/10.1086/324593.
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    • Ashley-Koch, A. E., R. J. Carney, C. M. Wolpert, M. L. Cuccaro, J. R. Gilbert, J. M. Vance, and M. A. Pericak-Vance. “Screening for MECP2 mutations in females with autistic disorder.” American Journal of Medical Genetics  Neuropsychiatric Genetics 105, no. 7 (October 8, 2001): 632.
    • McCoy, P. A., S. Shao, C. M. Wolpert, S. L. Donnelly, A. Ashley-Koch, J. R. Gilbert, and M. A. Pericak-Vance. “Analysis of genetic risk factors for autistic disorder on Chromosome 7.” American Journal of Medical Genetics  Neuropsychiatric Genetics 105, no. 7 (October 8, 2001): 631–32.
    • Shao, Y., K. Raiford, C. M. Wolpert, A. Ashley-Koch, M. L. Cuccaro, J. R. Gilbert, and M. A. Pericak-Vance. “Phenotypic homogeneity provides increased support for linkage on chromosome 2 in autistic disorder.” American Journal of Medical Genetics  Neuropsychiatric Genetics 105, no. 7 (October 8, 2001): 594.
    • Svenson, I. K., A. E. Ashley-Koch, P. C. Gaskell, T. J. Riney, W. J. Cumming, H. M. Kingston, E. L. Hogan, et al. “Identification and expression analysis of spastin gene mutations in hereditary spastic paraplegia.” Am J Hum Genet 68, no. 5 (May 2001): 1077–85. https://doi.org/10.1086/320111.
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    • Ashley-Koch, A., E. R. Bonner, P. C. Gaskell, S. G. West, R. Tim, C. M. Wolpert, R. Jones, et al. “Fine mapping and genetic heterogeneity in the pure form of autosomal dominant familial spastic paraplegia.” Neurogenetics 3, no. 2 (March 2001): 91–97. https://doi.org/10.1007/s100480000098.
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    • Ashley-Koch, A., C. C. Murphy, M. J. Khoury, and C. A. Boyle. “Contribution of sickle cell disease to the occurrence of developmental disabilities: a population-based study.” Genet Med 3, no. 3 (2001): 181–86. https://doi.org/10.1097/00125817-200105000-00006.
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    • Svenson, I. K., A. E. Ashley-Koch, P. C. Gaskell, T. J. Riney, C. Warner, C. D. Farrell, R. M. N. Boustany, et al. “Mutation analysis of the spastin gene in hereditary spastic paraplegia type 4 - evidence of aberrant transcript splicing caused by mutations in noncanonical splice site sequences.” American Journal of Human Genetics 67, no. 4 (October 1, 2000): 375–375.
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    • Basu, S., A. Ashley-Koch, C. M. Wolpert, M. M. Menold, N. Matsumoto, D. M. Greenblatt, C. M. Powell, et al. “Identification of autism susceptibility candidates on 7q.” American Journal of Medical Genetics  Neuropsychiatric Genetics 96, no. 4 (August 7, 2000): 479.
    • Santangelo, S., A. Ashley-Koch, M. Pericak-Vance, J. Silverman, C. J. Smith, and J. Buxbaum. “Combined analysis of data on chromosome 7q from three autism genome scans.” American Journal of Medical Genetics  Neuropsychiatric Genetics 96, no. 4 (August 7, 2000): 480.
    • Ashley-Koch, A., Q. Yang, and R. S. Olney. “Sickle hemoglobin (HbS) allele and sickle cell disease: a HuGE review.” Am J Epidemiol 151, no. 9 (May 1, 2000): 839–45. https://doi.org/10.1093/oxfordjournals.aje.a010288.
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    • Ashley-Koch, A., C. M. Wolpert, M. M. Menold, L. Zaeem, S. Basu, S. L. Donnelly, S. A. Ravan, et al. “Genetic studies of autistic disorder and chromosome 7.” Genomics 61, no. 3 (November 1, 1999): 227–36. https://doi.org/10.1006/geno.1999.5968.
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    • Hauser, E. R., A. Ashley-Koch, M. A. Pericak-Vance, and M. Boehnke. “Affected sibpair analysis: Exploring the efficiency of fine mapping in the presence of genotyping error.” American Journal of Human Genetics 65, no. 4 (October 1, 1999): A99–A99.
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    • Anderson, J. L., E. R. Hauser, E. R. Martin, W. K. Scott, A. Ashley-Koch, K. J. Kim, S. A. Monks, C. S. Haynes, M. C. Speer, and M. A. Pericak-Vance. “Complete genomic screen for disease susceptibility loci in nuclear families.” Genet Epidemiol 17 Suppl 1 (1999): S473–78. https://doi.org/10.1002/gepi.1370170776.
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    • Ashley-Koch, A. E., H. Robinson, A. E. Glicksman, S. L. Nolin, C. E. Schwartz, W. T. Brown, G. Turner, and S. L. Sherman. “Examination of factors associated with instability of the FMR1 CGG repeat.” Am J Hum Genet 63, no. 3 (September 1998): 776–85. https://doi.org/10.1086/302018.
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    • Sun, F., A. E. Ashley-Koch, L. K. Durham, E. Feingold, M. E. Halloran, A. K. Manatunga, and S. L. Sherman. “Testing for contributions of mitochondrial DNA mutations to complex diseases.” Genet Epidemiol 15, no. 5 (1998): 451–69. https://doi.org/10.1002/(SICI)1098-2272(1998)15:5<451::AID-GEPI2>3.0.CO;2-3.
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    • Savage, A., F. Sun, D. C. Crawford, A. E. Ashley, Q. Yang, and S. L. Sherman. “Sequential sib-pair and association studies to detect genes in quantitative traits.” Genet Epidemiol 14, no. 6 (1997): 885–90. https://doi.org/10.1002/(SICI)1098-2272(1997)14:6<885::AID-GEPI54>3.0.CO;2-I.
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    • Nolin, S. L., F. A. Lewis, L. L. Ye, G. E. Houck, A. E. Glicksman, P. Limprasert, S. Y. Li, et al. “Familial transmission of the FMR1 CGG repeat.” Am J Hum Genet 59, no. 6 (December 1996): 1252–61.
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    • Meadows, K. L., D. Pettay, J. Newman, J. Hersey, A. E. Ashley, and S. L. Sherman. “Survey of the fragile X syndrome and the fragile X E syndrome in a special education needs population.” Am J Med Genet 64, no. 2 (August 9, 1996): 428–33. https://doi.org/10.1002/(SICI)1096-8628(19960809)64:2<428::AID-AJMG39>3.0.CO;2-F.
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    • Sherman, S. L., K. L. Meadows, and A. E. Ashley. “Examination of factors that influence the expansion of the fragile X mutation in a sample of conceptuses from known carrier females.” Am J Med Genet 64, no. 2 (August 9, 1996): 256–60. https://doi.org/10.1002/(SICI)1096-8628(19960809)64:2<256::AID-AJMG4>3.0.CO;2-S.
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    • Ashley, A. E., and S. L. Sherman. “Population dynamics of a meiotic/mitotic expansion model for the fragile X syndrome.” Am J Hum Genet 57, no. 6 (December 1995): 1414–25.
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    • Falk, C. T., A. Ashley, N. Lamb, and S. L. Sherman. “Identification of susceptibility loci contributing to a complex disease using conventional segregation, linkage, and association methods.” Genet Epidemiol 12, no. 6 (1995): 601–6. https://doi.org/10.1002/gepi.1370120613.
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    • Speer, M. C., M. A. Pericak-Vance, L. Yamaoka, W. Y. Hung, A. Ashley, J. M. Stajich, and A. D. Roses. “Presymptomatic and prenatal diagnosis in myotonic dystrophy by genetic linkage studies.” Neurology 40, no. 4 (April 1990): 671–76. https://doi.org/10.1212/wnl.40.4.671.
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  • Book Sections

    • Markunas, C. A., A. E. Ashley-Koch, and S. G. Gregory. “Genetics of the chiari I and II malformations.” In The Chiari Malformations, 289–97, 2020. https://doi.org/10.1007/978-3-030-44862-2_23.
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    • Markunas, C. A., A. E. Ashley-Koch, and S. G. Gregory. “Genetics of the Chiari i and II malformations.” In The Chiari Malformations, 9781461463696:93–101, 2013. https://doi.org/10.1007/978-1-4614-6369-6_7.
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  • Other Articles

    • Aung, Tin, Mineo Ozaki, Takanori Mizoguchi, R Rand Allingham, Zheng Li, Aravind Haripriya, Satoko Nakano, et al. “Corrigendum: a common variant mapping to CACNA1A is associated with susceptibility to exfoliation syndrome.” Nat Genet, June 2015. https://doi.org/10.1038/ng0615-689c.
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  • Conference Papers

    • Wen, Fayuan, Angela Rock, Juan Salomon-Andonie, Gulriz Kurban, Xiaomei Niu, Songping Wang, Xu Zhang, et al. “Genome Wide Association Analysis of Iron Overload in the Trans-Omics for Precision Medicine (TOPMed) Sickle Cell Disease Cohorts.” In Blood, 136:52–52. American Society of Hematology, 2020. https://doi.org/10.1182/blood-2020-142809.
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    • Baker, C., P. Hillman, L. Hebert, J. Hixson, A. Ashley-Koch, H. Northrup, and K. Au. “IDENTIFICATION OF NOVEL CANDIDATE RISK GENES FOR MYELOMENINGOCELE WITHIN THE GLUCOSE HOMEOSTASIS AND FOLATE AND ONE CARBON METABOLISM NETWORKS.” In Journal of Investigative Medicine, 68:A145–46. BMJ PUBLISHING GROUP, 2020. https://doi.org/10.1136/jim-2019-WMRC.336.
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    • Kachroo, Priyadarshini, Julian Hecker, Bo L. Chawes, Tarunveer S. Ahluwalia, Michael H. Cho, Dandi Qiao, Rachel S. Kelly, et al. “Whole Genome Sequencing Identifies CRISPLD2 as a Lung Function Gene in Children With Asthma.” In Chest, 156:1068–79, 2019. https://doi.org/10.1016/j.chest.2019.08.2202.
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    • Bundy, Joseph L., Blair R. Anderson, Ludmila Francescatto, Melanie E. Garrett, Karen L. Soldano, Marilyn J. Telen, Erica E. Davis, and Allison E. Ashley-Koch. “RNA sequencing of isolated cell populations expressing human APOL1 G2 risk variant reveals molecular correlates of sickle cell nephropathy in zebrafish podocytes.” In Plos One, 14:e0217042, 2019. https://doi.org/10.1371/journal.pone.0217042.
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    • Gelineau-Van Waes, J., R. T. Riley, K. Voss, A. Ashley-Koch, S. Gregory, A. Moseley, E. Soderblom, J. Maddox, and N. Merritt. “Fumonisin B1 (FB1) and Fingolimod (FTY720): Tortilla Toxin and Oral Therapeutic Target Sphingolipid Pathways during Neural Tube Closure.” In Birth Defects Research, 110:730–730. WILEY, 2018.
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    • Smith, Alicia, Andrew Ratanatharathorn, Marco Boks, Mark Logue, Adam Maihofer, Varun Kilaru, Murray Stein, et al. “Meta-Analysis of DNA Methylation and PTSD in the Psychiatric Genomics Consortium PTSD Epigenetics Workgroup.” In Neuropsychopharmacology, 42:S120–21. NATURE PUBLISHING GROUP, 2017.
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    • Grotegut, Chad A., Emily Ngan, Melanie E. Garrett, Allison E. Ashley-Koch, and Geeta K. Swamy. “27: Single nucleotide polymorphisms in the oxytocin receptor and GRK6 are associated with oxytocin dosing requirements and labor outcomes.” In American Journal of Obstetrics and Gynecology, 216:S19–S19. Elsevier BV, 2017. https://doi.org/10.1016/j.ajog.2016.11.918.
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    • Anderson, Blair R., Melanie E. Garrett, Karen L. Soldano, Eugene P. Orringer, James R. Eckman, Ludmila Francescatto, Erica E. Davis, et al. “GWAS Meta-Analysis of Glomerular Filtration Rate in Three Cohorts of Sickle Cell Disease Patients and In Vivo Functional Analysis Reveals Potential Nephropathy Candidate Genes.” In Blood, 128:269–269. American Society of Hematology, 2016. https://doi.org/10.1182/blood.v128.22.269.269.
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    • Jacob, Seethal A., Enrico M. Novelli, Jeffrey S. Isenberg, Melanie E. Garrett, Yanxia Chu, Karen L. Soldano, Kenneth I. Ataga, et al. “Thrombospondin-1 Polymorphisms Are Associated with Chronic Kidney Disease in Sickle Cell Anemia.” In Blood, 128:2491–2491. American Society of Hematology, 2016. https://doi.org/10.1182/blood.v128.22.2491.2491.
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    • Xu, Julia Z., Melanie E. Garrett, Karen L. Soldano, Sean T. Chen, Allison E. Ashley-Koch, and Marilyn J. Telen. “Factors Related to the Progression of Sickle Cell Disease Nephropathy.” In Blood, 128:9–9. American Society of Hematology, 2016. https://doi.org/10.1182/blood.v128.22.9.9.
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    • Morey, Rajendra A., Mark Logue, Allison Ashley-Koch, Melanie Garrett, Sarah Lancaster, Mike Hauser, Kate McLaughlin, et al. “Genome-Wide Association of Neuroimaging Phenotypes in PTSD at Multiple Sites.” In Biological Psychiatry, 79:165S-165S. ELSEVIER SCIENCE INC, 2016.
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    • Smith, Alicia, Andrew Ratanatharathorn, Marco Boks, Mark Logue, Adam Maihofer, Varun Kilaru, Melanie Garrett, et al. “Epigenome-Wide Association of PTSD from Heterogeneous Cohorts with a Common Multi-Site Analysis Pipeline.” In Biological Psychiatry, 79:164S-165S. ELSEVIER SCIENCE INC, 2016.
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    • Riley, Ronald, Kenneth Voss, Jency Showker, Trevor Mitchell, Olga Torres, Jorge Matute, Simon Gregory, Allison Ashley-Koch, Joyce Maddox, and Janee Gelineau-van Waes. “Fumonisin exposure in women linked to inhibition of an enzyme that is a key event in farm and laboratory animal diseases.” In Abstracts of Papers of the American Chemical Society, Vol. 251. AMER CHEMICAL SOC, 2016.
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    • Garrett, Melanie E., Karen L. Soldano, Blair R. Anderson, Marilyn J. Telen, and Allison E. Ashley-Koch. “Genome-Wide Evaluation of Epistasis with APOL1 Risk Variants in Sickle Cell Disease Nephropathy.” In Blood, Vol. 126. AMER SOC HEMATOLOGY, 2015.
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    • Lancaster, Sarah, Melanie Garrett, Courtney Haswell, Christine Marx, Michael Hauser, Allison Ashley-Koch, and Rajendra Morey. “Posttraumatic Stress Disorder and Common Genetic Variants Affect Subcortical Brain Volumes in Recent Military Veterans.” In Neuropsychopharmacology, 40:S455–56. NATURE PUBLISHING GROUP, 2015.
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    • Geisert, Eldon E., Felix L. Struebing, Rebecca King, Louis R. Pasquale, Allison E. Ashley-Koch, Michael A. Hauser, R Rand Allingham, and Janey L. Wiggs. “GENOMIC LOCI MODULATING GANGLION CELL DEATH FOLLOWING ELEVATED IOP IN THE MOUSE.” In Investigative Ophthalmology & Visual Science, Vol. 56. ASSOC RESEARCH VISION OPHTHALMOLOGY INC, 2015.
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    • King, Rebecca, Michael A. Hauser, Louis R. Pasquale, Janey L. Wiggs, Allison E. Ashley-Koch, R Rand Allingham, and Eldon E. Geisert. “Mouse Genomic Loci Modulating Corneal Thickness.” In Investigative Ophthalmology & Visual Science, Vol. 56. ASSOC RESEARCH VISION OPHTHALMOLOGY INC, 2015.
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    • Struebing, Felix L., Rebecca King, Allison Ashley-Koch, Michael A. Hauser, R Rand Allingham, and Eldon E. Geisert. “Interval mapping reveals a quantitative trait locus controlling retinal ganglion cell number in mice.” In Investigative Ophthalmology & Visual Science, Vol. 56. ASSOC RESEARCH VISION OPHTHALMOLOGY INC, 2015.
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    • Kousa, Y. A., R. R. Roushangar, H. Zhu, Y. Lei, R. H. Finnell, W. D. Fakhouri, T. D. Busch, et al. “A GENE REGULATORY NETWORK SHARED BETWEEN NEURULATION AND OROFACIAL DEVELOPMENT.” In Journal of Investigative Medicine, 63:676–676. LIPPINCOTT WILLIAMS & WILKINS, 2015.
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    • Anderson, Blair R., Erica E. Davis, Marilyn J. Telen, and Allison E. Ashley-Koch. “Evidence for a Dominant Negative Effect Conferred By the APOL1 G2 Sickle Cell Nephropathy Risk Allele in an in Vivo Model.” In Blood, Vol. 124. AMER SOC HEMATOLOGY, 2014.
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    • Elmariah, Hany, Melanie E. Garrett, Karen L. Soldano, Kenneth I. Ataga, James R. Eckman, Marilyn J. Telen, and Allison E. Ashley-Koch. “Genes Associated with Survival in Adult Sickle Cell Disease.” In Blood, Vol. 124. AMER SOC HEMATOLOGY, 2014.
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    • Garrett, Melanie E., Karen L. Soldano, Blair R. Anderson, Eugene P. Orringer, James R. Eckman, Marilyn J. Telen, and Allison E. Ashley-Koch. “Genome-Wide Association Study of Glomerular Filtration Rate in a Cohort of Sickle Cell Disease Patients.” In Blood, Vol. 124. AMER SOC HEMATOLOGY, 2014.
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    • Milton, Jacqueline N., Allison E. Ashley-Koch, Melanie E. Garrett, Karen L. Soldano, Eugene P. Orringer, Paola Sebastiani, Daniel A. Dworkis, Karen Quillen, Martin H. Steinberg, and Marilyn J. Telen. “Genes Associated with Alloimmunization to Blood Group Antigens in Sickle Cell Disease.” In Blood, Vol. 124. AMER SOC HEMATOLOGY, 2014.
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    • Taylor, Warren, Ayman Saleh, Guy Potter, Brian Boyd, Douglas McQuoid, Kamil Kudra, Allison Ashley-Koch, and James MacFall. “The Influence of APOE Genotype on Aging's Effect on Brain Structure and Cognition in Younger Adults with and without Depression.” In Neuropsychopharmacology, 39:S215–16. NATURE PUBLISHING GROUP, 2014.
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    • Kimbrel, Nathan, Michael Hauser, Melanie Garrett, Allison Ashley-Koch, Yutao Liu, Michelle Dennis, Rebecca Klein, Valerie Knopik, and Jean Beckham. “Effect of the APOE epsilon 4 allele and combat exposure on PTSD and psychiatric comorbidity.” In Behavior Genetics, 44:664–65. SPRINGER, 2014.
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    • Aboobakar, Inas F., Yutao Liu, Shiro Miura, Joshua Wheeler, Xuejun Qin, Megan Ulmer Carnes, Benjamin T. Whigham, Allison E. Ashley-Koch, Michael A. Hauser, and R Rand Allingham. “Variants associated with exfoliation glaucoma affect promoter activity of the LOXL1 antisense gene.” In Investigative Ophthalmology & Visual Science, Vol. 55. ASSOC RESEARCH VISION OPHTHALMOLOGY INC, 2014.
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    • Ashley-Koch, Allison E., Melanie E. Garrett, Jonathan L. Haines, Janey L. Wiggs, Louis R. Pasquale, Yutao Liu, R Rand Allingham, and Michael A. Hauser. “Copy Number Variants associated with Glaucoma in the NEIGHBOR Study.” In Investigative Ophthalmology & Visual Science, Vol. 55. ASSOC RESEARCH VISION OPHTHALMOLOGY INC, 2014.
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    • Hauser, Michael A., Allison E. Ashley-Koch, Xuejun Qin, Shelby Strickland, Yutao Liu, Christopher A. Girkin, Donald L. Budenz, Stephen Akafo, and R Rand Allingham. “Rare Genetic Variants are Associated with POAG in Populations of African Ancestry.” In Investigative Ophthalmology & Visual Science, Vol. 55. ASSOC RESEARCH VISION OPHTHALMOLOGY INC, 2014.
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    • Havens, Shane J., Joanne C. Wen, Megan Ulmer Carnes, Janey L. Wiggs, Louis R. Pasquale, Allison E. Ashley-Koch, Michael A. Hauser, and R Rand Allingham. “The retinal nerve fiber layer is reduced in POAG cases homozygous for the common Six6 risk-allele of rs33912345 (Asn141His).” In Investigative Ophthalmology & Visual Science, Vol. 55. ASSOC RESEARCH VISION OPHTHALMOLOGY INC, 2014.
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    • Anderson, Blair R., Erica E. Davis, Marilyn J. Telen, and Allison E. Ashley-Koch. “In Vivo Modeling Of Genetic Mechanisms Associated With Sickle Cell Disease Nephropathy.” In Blood, 122:2224–2224. American Society of Hematology, 2013. https://doi.org/10.1182/blood.v122.21.2224.2224.
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    • Ashley-Koch, Allison, Xuejun Qin, Jason Gibson, Yutao Liu, Janey Wiggs, Julia Richards, Sayoko Moroi, Christopher Girkin, R Rand Allingham, and Michael Hauser. “Rare Genetic Variants in African Americans with Primary Open Angle Glaucoma.” In Investigative Ophthalmology & Visual Science, Vol. 54. ASSOC RESEARCH VISION OPHTHALMOLOGY INC, 2013.
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    • Hauser, Michael, Megan Ulmer, Yangfan Liu, Erica Davis, Nicholas Katsanis, Yutao Liu, Louis Pasquale, Janey Wiggs, Allison Ashley-Koch, and R Rand Allingham. “The role of SIX6 in primary open-angle glaucoma.” In Investigative Ophthalmology & Visual Science, Vol. 54. ASSOC RESEARCH VISION OPHTHALMOLOGY INC, 2013.
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    • Liu, Yutao, Xuejun Qin, Jason Gibson, Susan Williams, Robyn Rautenbach, Trevor Carmichael, Allison Ashley-Koch, R Rand Allingham, and Michael Hauser. “The Role of Protein-Coding Variants in South Africans with Exfoliation Glaucoma.” In Investigative Ophthalmology & Visual Science, Vol. 54. ASSOC RESEARCH VISION OPHTHALMOLOGY INC, 2013.
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    • Babyak, Michael A., Richard C. Becker, Michael J. Helms, Rong Jiang, Abanish Singh, Beverly H. Brummett, Ilene C. Siegler, Allison Ashley-Koch, Thomas Ortel, and Redford B. Williams. “ADRENERGIC GENE VARIANTS ARE ASSOCIATED WITH PLATELET AGGREGATION TO EPINEPHRINE.” In Psychosomatic Medicine, 75:A87–A87. LIPPINCOTT WILLIAMS & WILKINS, 2013.
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    • Napier, Melanie D., Charles Poole, Glen A. Satten, Allison Ashley-Koch, Ruth Ann Marrie, and Dhelia M. Williamson. “Heavy Metals, Organic Solvents and Multiple Sclerosis: An Exploratory Analysis of Gene-environment Interactions.” In Genetic Epidemiology, 36:758–758. WILEY-BLACKWELL, 2012.
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    • Garrett, Melanie E., Cynthia A. Moylan, Jason Gibson, Hyuna Yang, Herbert Pang, Andrew Dellinger, Ayako Suzuki, et al. “Expression QTL analysis of a gene expression signature which predicts advanced non-alcoholic fatty liver disease.” In Hepatology, 56:267A-268A. WILEY-BLACKWELL, 2012.
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    • Moylan, Cynthia A., Hyuna Yang, Herbert Pang, Andrew Dellinger, Ayako Suzuki, Hans L. Tillmann, Cynthia D. Guy, et al. “Epigenetic Regulation of Gene Expression in NAFLD.” In Gastroenterology, 142:S929–S929. W B SAUNDERS CO-ELSEVIER INC, 2012.
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    • Bae, Harold T., Clinton T. Baldwin, Mark T. Gladwin, Allison E. Ashley-Koch, Melanie Garrett, Karen Soldano, James G. Taylor, et al. “An Elevated Tricuspid Regurgitant Jet Velocity in Sickle Cell Disease Is Associated with Polymorphisms in Genes Impacting Innate Immunity.” In Blood, 118:240–240. AMER SOC HEMATOLOGY, 2011.
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    • Barber, Latorya A., Karen Soldano, Melanie Garrett, Eugene P. Orringer, James R. Eckman, Marilyn J. Telen, and Allison E. Ashley-Koch. “Inflammatory Polymorphisms Link the Risk of Acute Chest Syndrome with Asthma in Adults with Sickle Cell Disease.” In Blood, 118:493–493. AMER SOC HEMATOLOGY, 2011.
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    • Bidwell, L Cinnamon, Melanie E. Garrett, F Joseph McClernon, Bernard F. Fuemmeler, Redford B. Williams, Allison E. Ashley-Koch, and Scott H. Kollins. “Genotype and ADHD symptoms interact to predict adolescents' early smoking experiences in an epidemiological sample.” In Behavior Genetics, 41:893–893. SPRINGER, 2011.
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    • Waes, J Gelineau van, J. Maddox, A. Ashley-Koch, S. Gregory, O. Torres de Matute, K. A. Voss, and R. T. Riley. “Evaluating human exposure to fumonisins in Guatemala and its possible role as a contributing factor to neural tube defects.” In Phytopathology, 101:S222–S222. AMER PHYTOPATHOLOGICAL SOC, 2011.
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    • Taylor, Warren D., Allison Ashley-Koch, Sophiya Benjamin, Douglas McQuoid, David C. Steffens, Ranga R. Krishnan, and Elizabeth Hauser. “Genotypic Differences in Angiotensin Receptor Genes in Late-Life Depression.” In Biological Psychiatry, 69:154S-154S. ELSEVIER SCIENCE INC, 2011.
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    • Benjamin, Sophiya, Martha Payne, Allison Ashley-Koch, Douglas McQuoid, James MacFall, and Warren D. Taylor. “Variation in the AGTR1 Gene and Altered Frontotemporal Structural Connectivity in Late-Life Depression.” In American Journal of Geriatric Psychiatry, 19:S100–S100. LIPPINCOTT WILLIAMS & WILKINS, 2011.
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    • Ashley-Koch, Allison E., Melanie Garrett, Karen Soldano, Latorya A. Barber, and Marilyn J. Telen. “Hydroxyurea Induces Genome-Wide Epigenetic Changes In Sickle Cell Disease.” In Blood, 116:2670–2670. American Society of Hematology, 2010. https://doi.org/10.1182/blood.v116.21.2670.2670.
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    • Barber, Latorya A., Melanie Garrett, Karen Soldano, Eugene P. Orringer, James R. Eckman, Marilyn J. Telen, and Allison E. Ashley-Koch. “Anti-Inflammatory Markers Are Associated with Glomerular Filtration Rate In Adults with Sickle Cell Disease.” In Blood, 116:693–94. AMER SOC HEMATOLOGY, 2010.
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    • Okocha, Emmanuel, Melanie Garrett, Karen Soldano, Laura M. De Castro, Jude Jonassaint, Eugene P. Orringer, James R. Eckman, Marilyn J. telen, and Allison E. Ashley-Koch. “Genetic Variation In MYH9 Is Associated with Sickle Cell Disease Nephropathy.” In Blood, 116:692–692. AMER SOC HEMATOLOGY, 2010.
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    • Swamy, Geeta K., Melanie E. Garrett, Allison E. Ashley-Koch, and Marie Lynn Miranda. “743: Genetic variation in G-protein coupled receptor kinase-5 and preeclampsia.” In American Journal of Obstetrics and Gynecology, 201:S267–68. Elsevier BV, 2009. https://doi.org/10.1016/j.ajog.2009.10.760.
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    • Barber, Latorya A., Allison E. Ashley-Koch, Melanie E. Garrett, Karen L. Soldano, and Marilyn J. Telen. “Polymorphisms in TNFα Are Associated with Cerebrovascular Events in Sickle Cell Disease.” In Blood, 114:1540–1540. American Society of Hematology, 2009. https://doi.org/10.1182/blood.v114.22.1540.1540.
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    • Timofeev, Nadia, Jacqueline N. Milton, Stephen W. Hartley, Richard Sherva, Paola Sebastiani, Daniel A. Dworkis, Elizabeth S. Klings, et al. “Genome-Wide Studies in Sickle Cell Anemia Show Associations Between SNPs in the Olfactory Receptor Gene Cluster and Fetal Hemoglobin Concentration.” In Blood, 114:339–339. AMER SOC HEMATOLOGY, 2009.
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    • El Khatib, Aya, Allison Ashley-Koch, Melanie Kail, Ann Collins, Jude Jonassaint, Soheir S. Adam, Kenneth I. Ataga, et al. “Further investigation of the role of factor XIII in priapism associated with SCD.” In Blood, 110:998A-998A. AMER SOC HEMATOLOGY, 2007.
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    • Jonassaint, Charles R., Jude C. Jonassaint, Allison Ashley-Koch, Soheir S. Adam, Marilyn J. Telen, and Laura M. De Castro. “The Effects of Chronic Opiates Pain Therapy in Sickle Cell Anemia.” In Blood, 110:3404–3404. American Society of Hematology, 2007. https://doi.org/10.1182/blood.v110.11.3404.3404.
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    • Ashley-Koch, Allison, Michael Cuccaro, Khanh Nhat Tran-Viet, Heidi Cope, Ranga Krishnan, Margaret Pericak-Vance, Harry Wright, and Stephan Zuchner. “Trichotillomania is associated with mutations in SLITRK1.” In American Journal of Medical Genetics Part B Neuropsychiatric Genetics, 141B:761–761. WILEY-LISS, 2006.
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    • Cuccaro, Michael, Scott Collins, Arthur Anastopoulos, Ave Lachiewicz, Erin Kane, David FitzGerald, Melanie Kail, Linda Exelbierd, John Gilbert, and Allison Ashley-Koch. “Polymorphisms in DRD2 are associated with AD/HD.” In American Journal of Medical Genetics Part B Neuropsychiatric Genetics, 141B:767–767. WILEY-LISS, 2006.
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    • Kollins, Scott, Jeff Epstein, Simon Tonev, Arthur Anastopoulos, Ave Lachiewicz, David Fitzgerald, Erin Kane, et al. “Genetic associations with reaction time variability in AD/HD.” In American Journal of Medical Genetics Part B Neuropsychiatric Genetics, 141B:771–72. WILEY-LISS, 2006.
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    • Afenyi-Annan, A. N., F. L. Graham, J. Galloway, J. Price, M. R. Combs, J. M. Vance, A. Ashley-Koch, and M. J. Telen. “Allolimmunization and clinical disease severity in sickle cell disease.” In Transfusion, 46:129A-129A. BLACKWELL PUBLISHING, 2006.
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    • Afenyi-Annan, A. N., F. L. Graham, J. Galloway, J. Price, M. R. Combs, J. M. Vance, A. Ashley-Koch, and M. J. Telen. “Duffy genotype is associated with sickle cell nephropathy.” In Transfusion, 46:2A-3A. WILEY-BLACKWELL, 2006.
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    • Zuchner, Stephan, Gaofeng Wang, Martha A. Nance, Allison E. Ashley-Koch, and Margaret A. Pericak-Vance. “Hereditary spastic paraplegia is caused by mutations in the novel mitochondrial protein REEP1.” In Annals of Neurology, 60:S60–S60. WILEY-LISS, 2006.
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    • Brummett, B., A. Ashley-Koch, C. Kuhn, M. Kail, J. Vance, S. Zuchner, I. Siegler, J. Barefoot, and R. Williams. “5HTTLPR genotypes and environmental stress interact to affect sleep quality.” In Neuropsychopharmacology, 30:S244–45. NATURE PUBLISHING GROUP, 2005.
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    • Williams, R., M. Kail, M. Speer, B. Brummett, S. Zuchner, I. Siegler, J. Barefoot, et al. “Candidate gene polymorphisms and birth weight (BW) in the national longitudinal study of adolescent health (add health).” In Neuropsychopharmacology, 30:S208–9. NATURE PUBLISHING GROUP, 2005.
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    • Ashley-Koch, A. E., L. M. De Castro, F. Lennon-Graham, J. Jonassaint, T. L. Jackson, J. Price, J. Galloway, et al. “Priapism in SCD: Clinical and genetic correlations.” In Blood, 106:887A-887A. AMER SOC HEMATOLOGY, 2005.
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    • Ashley-Koch, A. E., L. M. De Castro, F. Lennon-Graham, J. Jonassaint, T. L. Jackson, J. Price, J. Galloway, et al. “Clinical and genetic profiles of the aging sickle cell patient.” In Blood, 106:26A-26A. AMER SOC HEMATOLOGY, 2005.
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    • Ashley-Koch, A. E., L. Zhang, S. Knauer, C. Haynes, C. Salzman, and M. M. Menold. “Results from 10k SNP genomic screen provide further evidence for genetic heterogeneity in essential tremor.” In Movement Disorders, 20:S173–S173. WILEY-LISS, 2005.
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    • Ashley-Koch, Allison E., Laura De Castro, Felicia Lennon-Graham, Jude Jonassaint, Terry L. Jackson, Jennifer Price, Jason Galloway, et al. “Genetic Polymorphisms Associated with Risk for Pulmonary Hypertension and Proteinuria in Sickle Cell Disease.” In Blood, 104:1668–1668. American Society of Hematology, 2004. https://doi.org/10.1182/blood.v104.11.1668.1668.
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    • De Castro, Laura M., Jude C. Jonassaint, Felicia L. Graham, Allison Ashley-koch, and Marilyn J. Telen. “Pulmonary Hypertension in SS, SC and Sβ Thalassemia: Prevalence, Associated Clinical Syndromes, and Mortality.” In Blood, 104:1663–1663. American Society of Hematology, 2004. https://doi.org/10.1182/blood.v104.11.1663.1663.
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    • Eyler, Christine E., Terry L. Jackson, Laura M. De Castro, Rahima Zennadi, Jeffery M. Vance, Allison Ashley-Koch, and Marilyn J. Telen. “Effects of Single Nucleotide Polymorphisms of the β2 Adrenergic Receptor and of Adenylate Cyclase on Sickle Red Cell Adhesion to Laminin.” In Blood, 104:3565–3565. American Society of Hematology, 2004. https://doi.org/10.1182/blood.v104.11.3565.3565.
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    • Ashley-Koch, A. E., J. Jaworski, H. Mei, M. Menold, R. Rabionet, D. Skaar, M. Ritchie, et al. “Evidence for gene-gene interactions influencing susceptibility to autistic disorder.” In American Journal of Medical Genetics Part B Neuropsychiatric Genetics, 130B:105–6. WILEY-LISS, 2004.
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    • Menold, M. M., J. M. Jaworski, Y. Dementieva, C. M. Wolpert, S. Donnelly, R. K. Abramson, H. H. Wright, et al. “Mutation screening and SNP analysis of GABRB3 in a subset of autistic individuals.” In American Journal of Medical Genetics Part B Neuropsychiatric Genetics, 130B:105–105. WILEY-LISS, 2004.
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    • Schug, M. D., A. Anastopoulos, S. Kollins, L. Hennis, S. Nelson, L. Mehltretter, J. Gilbert, M. Cuccaro, and A. Ashley-Koch. “The genetics of AD/HD: Subtyping, comorbidity and developmental considerations.” In American Journal of Medical Genetics Part B Neuropsychiatric Genetics, 130B:103–103. WILEY-LISS, 2004.
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    • Ashley-Koch, A. E., L. Zhang, J. M. Stajich, S. West, M. A. Pericak-Vance, and J. R. Gilbert. “A genomic screen for a novel essential tremor locus.” In Movement Disorders, 19:S352–S352. WILEY-LISS, 2004.
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    • Gilbert, J. R., J. M. Stajich, S. Knauer, B. Scott, J. M. Vance, and A. E. Ashley-Koch. “Prevalence and severity of tremor in familial essential tremor.” In Movement Disorders, 19:S454–55. WILEY-LISS, 2004.
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    • Stajich, J. M., S. Knauer, B. Scott, J. M. Vance, A. E. Ashley-Koch, and J. R. Gilbert. “Prevalence of tandem gait and intention tremor in familial essential tremor.” In Movement Disorders, 19:S453–S453. WILEY-LISS, 2004.
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    • De Castro, L. M., J. C. Jonassaint, S. Rainey, R. Motley, S. Jones, J. Galloway, L. Zhang, et al. “B-CAM/LU polymorphisms: Effect on sickle cell disease outcomes and cell adhesion.” In Blood, 102:28B-28B. AMER SOC HEMATOLOGY, 2003.
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    • Telen, M. J., A. E. Ashley-Koch, L. Zhang, J. Jonassaint, S. Rainey, R. Motley, S. Jones, et al. “Examination of a VCAM1 polymorphism as a risk modifier for clinical outcomes in sickle cell disease.” In Blood, 102:29B-29B. AMER SOC HEMATOLOGY, 2003.
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    • Ashley-Koch, A. E., E. R. Martin, J. Jaworski, M. M. Menold, C. A. Haynes, M. L. Cuccaro, J. R. Gilbert, and M. A. Pericak-Vance. “Examination of multilocus association of the GABAA receptor subunit genes in multiplex autism families.” In American Journal of Human Genetics, 73:491–491. UNIV CHICAGO PRESS, 2003.
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    • Jaworski, J., A. E. Ashley-Koch, M. Menold, R. K. Abramson, G. R. DeLong, H. H. Wright, M. L. Cuccaro, J. R. Gilbert, and M. A. Pericak-Vancl. “Investigation of parent of origin effects for Autism susceptibility loci on chromosomes 2, 7 and 15.” In American Journal of Human Genetics, 73:334–334. UNIV CHICAGO PRESS, 2003.
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    • Svenson, I. K., M. T. Kloos, P. C. Gaskell, M. A. Nance, J. Y. Garbern, M. A. Pericak-Vance, A. E. Ashley-Koch, and D. A. Marchuk. “An intragenic modifier of hereditary spastic paraplegia due to spastin gene mutation suggests a role for cyclin-dependent kinase 5 in HSP pathogenesis.” In American Journal of Human Genetics, 73:550–550. UNIV CHICAGO PRESS, 2003.
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    • Zhang, F., J. Stajich, S. West, R. Smith, J. Vance, M. Pericak-Vance, A. Ashley-Koch, and J. John. “A genomic screen of essential tremor.” In American Journal of Human Genetics, 73:495–495. UNIV CHICAGO PRESS, 2003.
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    • Zhang, L., M. T. Kloos, S. West, P. C. Gaskell, I. K. Svenson, M. A. Pericak-Vance, D. A. Marchuk, and A. E. Ashley-Koch. “A Genomic screen reveals evidence for novel SPG loci.” In American Journal of Human Genetics, 73:470–470. UNIV CHICAGO PRESS, 2003.
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    • De Castro, L. M., J. Jonassaint, S. Rainey, R. Motley, S. Jones, J. Galloway, L. Zhang, et al. “B-CAM/LU modifies sickle cell disease severity.” In American Journal of Human Genetics, 73:569–569. UNIV CHICAGO PRESS, 2003.
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    • Telen, M. J., A. E. Ashley-Koch, L. Zhang, J. Jonassaint, S. Rainey, R. Motley, S. Jones, et al. “Examination of VCAM1 as a modulator of stroke risk in sickle cell disease.” In American Journal of Human Genetics, 73:569–569. UNIV CHICAGO PRESS, 2003.
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    • Kloos, M. T., E. Reid, A. Ashley-Koch, L. Hughes, S. Bevan, I. Svenson, P. C. Gaskell, et al. “A kinesin heavy chain (KIF5A) mutation in Hereditary Spastic Paraplegia (SPG10).” In American Journal of Human Genetics, 71:165–165. UNIV CHICAGO PRESS, 2002.
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    • Haines, J., A. Crunk, L. McFarland, W. Scott, P. C. Gaskell, Y. J. Shao, A. Ashley-Koch, and M. Pericak-Vance. “Examination of dementia of the Alzheimer type in the Amish.” In Neurobiology of Aging, 23:S322–S322. ELSEVIER SCIENCE INC, 2002.
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    • Ashley-Koch, A., A. Agusti, P. Calverley, H. Coxon, C. Donner, B. Make, N. Muller, et al. “International network to investigate the genetics of Chronic Obstructive Pulmonary Disease.” In American Journal of Human Genetics, 69:307–307. UNIV CHICAGO PRESS, 2001.
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    • Abuya, P., A. Ashley-Koch, C. M. Wolpert, M. M. Menold, N. Matsumoto, S. Basu, D. M. Greenblatt, et al. “Isolation and analysis of Autism candidate genes on 7q.” In American Journal of Human Genetics, 67:362–362. UNIV CHICAGO PRESS, 2000.
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    • Ashley-Koch, A., M. Menold, K. Joyner, S. Mason, C. Poole, S. Donnelly, C. Wolpert, et al. “Examination of epigenetic factors and gene-gene interactions influencing genetic susceptibility at chromosomes 7 and 15 for autistic disorder.” In American Journal of Human Genetics, 67:46–46. UNIV CHICAGO PRESS, 2000.
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    • Gaskell, P. C., A. Ashley-Koch, E. R. Bonner, S. G. West, C. M. Wolpert, C. Warner, C. D. Farrell, et al. “Fine mapping and genetic heterogeneity in autosomal dominant familial spastic paraplegia.” In American Journal of Human Genetics, 67:309–309. UNIV CHICAGO PRESS, 2000.
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    • Haines, J. L., A. Ashley-Koch, C. E. Jackson, M. Booze, R. C. Ribble, J. B. Rimmler, M. E. Garcia, et al. “A genomic screen for multiple sclerosis loci in a San Marino population supports the presence of a locus on 19q.” In American Journal of Human Genetics, 67:21–21. UNIV CHICAGO PRESS, 2000.
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    • Hall, J. L., A. Ashley-Koch, P. C. Gaskell, C. E. Jackson, L. R. Bailey, W. K. Scott, J. L. Haines, and M. A. Pericak-Vance. “A genomic screen for dementia in an extended Amish family.” In American Journal of Human Genetics, 67:315–315. UNIV CHICAGO PRESS, 2000.
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    • Kim, S. J., M. M. Menold, L. Zaeem, A. Ashley-Koch, M. P. Bass, J. M. Vance, M. A. Pericak-Vance, and J. R. Gilbert. “CpG island and gene mapping in the Austistic Disorder region on chromosome 15q11-13.” In American Journal of Human Genetics, 67:362–362. UNIV CHICAGO PRESS, 2000.
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    • Santangelo, S. L., J. Buxbaum, J. Silverman, M. Pericak-Vance, and A. Ashley-Koch. “Confirmatory evidence of linkage for autism to 7q based on combined analysis of three independent data sets.” In American Journal of Human Genetics, 67:49–49. UNIV CHICAGO PRESS, 2000.
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    • Ashley-Koch, A., C. M. Wolpert, M. M. Menold, L. Zaeem, S. Basu, S. L. Donnelly, S. A. Ravan, et al. “Evidence for a paternal effect on chromosome 7 in Autistic Disorder.” In American Journal of Human Genetics, 65:A60–A60. UNIV CHICAGO PRESS, 1999.
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    • Basu, S., A. Ashley-Koch, C. M. Wolpert, M. M. Menold, N. Matsumoto, C. M. Powell, M. B. Qumsiyeh, et al. “Autistic Disorder and chromosome 7: Analysis of an inversion breakpoint in a multiplex family.” In American Journal of Human Genetics, 65:A264–A264. UNIV CHICAGO PRESS, 1999.
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    • Ashley-Koch, A., C. M. Wolpert, L. Zaeem, M. M. Menold, S. Basu, S. L. Donnelly, S. A. Ravan, et al. “Autistic disorder and chromosome 7: Evidence for a paternal effect.” In Molecular Psychiatry, 4:S15–S15. STOCKTON PRESS, 1999.
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    • Basu, S., A. Ashley-Koch, C. Wolpert, M. Menold, N. Matsumoto, C. Powell, M. B. Qumsiyeh, et al. “Characterization of an inversion breakpoint in a multiplex autistic disorder family: Defining the candidate region on chromosome 7q.” In Molecular Psychiatry, 4:S63–S63. STOCKTON PRESS, 1999.
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  • Preprints

    • Docherty, Anna, Niamh Mullins, Allison Ashley-Koch, Xue Qin, Jonathan Coleman, Andrey Shabalin, Jooeun Kang, et al. “Genome-wide association study meta-analysis of suicide attempt in 43,871 cases identifies twelve genome-wide significant loci.” MedRxiv, 2022. https://doi.org/10.1101/2022.07.03.22277199.
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• Teaching & Mentoring
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  Recent Courses

  • MGM 732: Human Genetics 2023
  • UPGEN 732: Human Genetics 2023
  • UPGEN 750S: Genetics Colloquium 2023
  • MGM 732: Human Genetics 2022
  • UPGEN 701: Advanced Topics in Genetics and Genomics 2022
  • UPGEN 732: Human Genetics 2022
  • UPGEN 750S: Genetics Colloquium 2022
  • UPGEN 778F: University Program in Genetics and Genomics Biological Solutions Module VI 2022
  • MGM 293: Research Independent Study I 2021
  • MGM 732: Human Genetics 2021
  • UPGEN 732: Human Genetics 2021
  • UPGEN 750S: Genetics Colloquium 2021
  • UPGEN 778F: University Program in Genetics and Genomics Biological Solutions Module VI 2021

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