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David Carlson

Yoh Family Associate Professor of Civil and Environmental Engineering
Civil and Environmental Engineering

Overview


My general research focus is on developing novel machine learning and artificial intelligence techniques that can be used to accelerate scientific discovery.  I work extensively both on the fundamental theory and algorithms as well as translating them into scientific applications.  I have extensive partnerships deploying machine learning techniques in environmental health, mental health, and neuroscience.  

Current Appointments & Affiliations


Yoh Family Associate Professor of Civil and Environmental Engineering · 2025 - Present Civil and Environmental Engineering, Pratt School of Engineering
Associate Professor of Civil and Environmental Engineering · 2024 - Present Civil and Environmental Engineering, Pratt School of Engineering
Associate Professor in Biostatistics & Bioinformatics · 2025 - Present Biostatistics & Bioinformatics, Division of Biostatistics, Biostatistics & Bioinformatics
Associate Professor in the Department of Electrical and Computer Engineering · 2024 - Present Pierre R. Lamond Department of Electrical and Computer Engineering, Pratt School of Engineering
Associate Professor of Computer Science · 2025 - Present Computer Science, Trinity College of Arts & Sciences
Associate Professor of Biomedical Engineering · 2025 - Present Biomedical Engineering, Pratt School of Engineering
Faculty Network Member of the Duke Institute for Brain Sciences · 2019 - Present Duke Institute for Brain Sciences, University Institutes and Centers

In the News


Published April 22, 2025
Ten Faculty Named 2025 Bass Chairs
Published June 27, 2024
For Many Urban Residents, It’s Hotter Than Their Weather App Says
Published July 14, 2023
Eyes in the Sky Bring Good News on Trash Burning in the Maldives

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Recent Publications


Advanced artificial intelligence vs simpler models for 1-year death prediction among patients receiving hemodialysis.

Journal Article JAMIA Open · April 2026 OBJECTIVES: We evaluated the data requirement for modern AI tools to outperform simpler models in predicting short-term mortality in over 500 000 patients with hemodialysis-dependent kidney failure. MATERIALS AND METHODS: We compared logistic regression, b ... Full text Link to item Cite

Scale-free and unbiased transformer with tokenization for cell type annotation from single-cell RNA-seq data

Journal Article Pattern Recognition · December 1, 2025 The exponentially increasing high-throughput single-cell RNA sequencing (scRNA-seq) data enables the further elucidation of more granular gene-cell expression patterns across diverse species, making the development of efficient cell type annotation methods ... Full text Cite
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Recent Grants


IUCRC Phase I Duke University: Center for Innovation in Risk-analysis for Climate Adaption and Decision-making (CIRCAD)

ResearchParticipating Faculty Member · Awarded by National Science Foundation · 2025 - 2030

Duke-NCCU Interdisciplinary Postdoctoral Training Program in Child Psychiatric and Neurodevelopmental Conditions Program (DN-IPT)

Inst. Training Prgm or CMEPreceptor · Awarded by National Institute of Mental Health · 2024 - 2029

Duke University Program in Environmental Health

Inst. Training Prgm or CMEMentor · Awarded by National Institute of Environmental Health Sciences · 2019 - 2029

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Education


Duke University · 2015 Ph.D.