Overview
I study the evolution of genes and genomes with the broad aim of understanding the origins of biological diversity. My approach focuses on changes in the expression of genes using both empirical and computational approaches and spans scales of biological organization from single nucleotides through gene networks to entire genomes. At the finer end of this spectrum of scale, I am focusing on understanding the functional consequences and fitness components of specific genetic variants within regulatory sequences of several genes associated with ecologically relevant traits. At the other end of the scale, I am developing molecular and analytical methods to detect changes in gene function throughout entire genomes, including statistical frameworks for detecting natural selection on regulatory elements and empirical approaches to identify functional variation in transcriptional regulation. At intermediate scales, I am investigating functional variation within a dense gene network in the context of wild populations and natural perturbations. My research leverages the advantages of several different model systems, but primarily focuses on sea urchins and primates (including humans).
Current Appointments & Affiliations
Professor of Biology
·
2005 - Present
Biology,
Trinity College of Arts & Sciences
Professor of Evolutionary Anthropology
·
2008 - Present
Evolutionary Anthropology,
Trinity College of Arts & Sciences
Professor of Cell Biology
·
2022 - Present
Cell Biology,
Basic Science Departments
Recent Publications
Wnt dynamics at the blastopore and stomodeum during sea urchin gastrulation.
Journal Article Development (Cambridge, England) · April 2026 In the sea urchin embryo, as many as ten Wnts are expressed by cells that undergo gastrulation movements. Here, Wnt1, 5, 6, 7, 8 and 16 are examined to learn details of expression and function over time using results from a temporal scRNA-seq analysis coup ... Full text CiteHiFi-Helper: A reproducible workflow for genome assembly from HiFi reads alone
Preprint · March 14, 2026 Full text CiteThe gene ivory:mir-193 controls scale type differentiation in Heliconius butterflies
Preprint · February 26, 2026 Full text CiteRecent Grants
Computational Biology and Bioinformatics Training Grant
Inst. Training Prgm or CMEMentor · Awarded by National Institutes of Health · 2026 - 2031Embryonic Cell Recognition: Specificity Determinants
ResearchCo-Principal Investigator · Awarded by Eunice Kennedy Shriver National Institute of Child Health and Human Development · 1980 - 2028Roles for uniquely human enhancers in brain development and Wnt signaling
ResearchCollaborator · Awarded by National Institute of Mental Health · 2023 - 2027View All Grants
Education
Duke University ·
1987
Ph.D.
College of William and Mary ·
1981
B.S.