Scholars@Duke

• Background
• 

  Education, Training, & Certifications

  • Ph.D., Duke University 2009
• 

  Duke Appointment History

  • Instructor, Medical Center in the Department of Biostatistics & Bioinformatics, Biostatistics & Bioinformatics, Basic Science Departments 2013
• Expertise
• 

  Subject Headings

  • Big data
  • Computer Simulation
  • Genes, Recessive
  • Genetic Association Studies
  • Genetic Predisposition to Disease
  • Genetic Testing
  • Heterozygote
  • High performance computing
  • Linkage Disequilibrium
  • Mutation
  • Parents
  • Quantitative Trait, Heritable
• Research
• 

  Selected Grants

  • Quantitative Methods for HIV/AIDS Research awarded by National Institutes of Health 2018 - 2023
  • A hands-on, integrative next-generation sequencing course: design, experiment, and analysis awarded by National Institutes of Health 2016 - 2019
• Publications & Artistic Works
• 

  Selected Publications

  • Conference Papers

    • Xing, C, M. McCarthy, J, Dupuis, J, Adrienne Cupples, L, B. Meigs, J, Lin, X, and S. Allen, A. "Robust analysis of secondary phenotypes in case-control genetic association studies." October 15, 2016.  Full Text

  • Journal Articles

    • Xing, C, M McCarthy, J, Dupuis, J, Adrienne Cupples, L, B Meigs, J, Lin, X, and S Allen, A. "Robust analysis of secondary phenotypes in case-control genetic association studies." Statistics in medicine 35, no. 23 (October 2016): 4226-4237.  Full Text
    • Acharya, CR, McCarthy, JM, Owzar, K, and Allen, AS. "Exploiting expression patterns across multiple tissues to map expression quantitative trait loci." BMC bioinformatics 17 (June 24, 2016): 257-.  Full Text
    • Mccarthy, JM, Shea, PR, Goldstein, DB, and Allen, AS. "Testing for risk and protective trends in genetic analyses of HIV acquisition." Biostatistics (Oxford, England) 16, no. 2 (April 2015): 268-280.  Full Text
    • Jiang, Y, McCarthy, JM, and Allen, AS. "Testing the effect of rare compound-heterozygous and recessive mutations in case--parent sequencing studies." Genetic epidemiology 39, no. 3 (March 2015): 166-172.  Full Text
• Teaching & Mentoring
• 

  Recent Courses

  • BIOSTAT 701: Introduction to Statistical Theory and Methods I 2018
  • BIOSTAT 704L: Advanced Statistical Theory and Method II Lab 2018
  • BIOSTAT 822: Data Science With R 2018
  • BIOSTAT 701L: Advanced Statistical Theory and Method I Lab 2017

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