Skip to main content

Selected Publications


Human-Centered Design of a Clinical Decision Support for Anemia Screening in Children with Inflammatory Bowel Disease.

Journal Article Applied clinical informatics · March 2023 BackgroundInflammatory bowel disease (IBD) commonly leads to iron deficiency anemia (IDA). Rates of screening and treatment of IDA are often low. A clinical decision support system (CDSS) embedded in an electronic health record could improve adher ... Full text Cite

Closing the Brief Case: The Fly Who Cried Wohlf.

Journal Article Journal of clinical microbiology · June 2022 Full text Cite

The Brief Case: The Fly Who Cried Wohlf.

Journal Article Journal of clinical microbiology · June 2022 Full text Cite

COVID-19 SignSym: a fast adaptation of a general clinical NLP tool to identify and normalize COVID-19 signs and symptoms to OMOP common data model.

Journal Article Journal of the American Medical Informatics Association : JAMIA · June 2021 The COVID-19 pandemic swept across the world rapidly, infecting millions of people. An efficient tool that can accurately recognize important clinical concepts of COVID-19 from free text in electronic health records (EHRs) will be valuable to accelerate CO ... Full text Cite

Age and frailty are independently associated with increased COVID-19 mortality and increased care needs in survivors: results of an international multi-centre study

Journal Article Age and Ageing · May 5, 2021 AbstractIntroductionIncreased mortality has been demonstrated in older adults with coronavirus disease 2019 (COVID-19), but the effect ... Full text Cite

Patient Trajectories Among Persons Hospitalized for COVID-19 : A Cohort Study.

Journal Article Annals of internal medicine · January 2021 BackgroundRisk factors for progression of coronavirus disease 2019 (COVID-19) to severe disease or death are underexplored in U.S. cohorts.ObjectiveTo determine the factors on hospital admission that are predictive of severe disease or de ... Full text Cite

COVID-19 SignSym: a fast adaptation of a general clinical NLP tool to identify and normalize COVID-19 signs and symptoms to OMOP common data model.

Journal Article ArXiv · July 13, 2020 The COVID-19 pandemic swept across the world rapidly, infecting millions of people. An efficient tool that can accurately recognize important clinical concepts of COVID-19 from free text in electronic health records (EHRs) will be valuable to accelerate CO ... Link to item Cite

NASPGHAN Annual Meeting Abstracts

Journal Article Journal of Pediatric Gastroenterology and Nutrition · November 2019 Full text Cite

Mouse Gut Microbiome-Encoded β-Glucuronidases Identified Using Metagenome Analysis Guided by Protein Structure.

Journal Article mSystems · August 2019 Gut microbial β-glucuronidase (GUS) enzymes play important roles in drug efficacy and toxicity, intestinal carcinogenesis, and mammalian-microbial symbiosis. Recently, the first catalog of human gut GUS proteins was provided for the Human Microbiome Projec ... Full text Cite

Multivariate Curve Resolution for Signal Isolation from Fast-Scan Cyclic Voltammetric Data.

Journal Article Analytical chemistry · October 2017 The use of multivariate analysis techniques, such as principal component analysis-inverse least-squares (PCA-ILS), has become standard for signal isolation from in vivo fast-scan cyclic voltammetric (FSCV) data due to its superior noise removal and interfe ... Full text Cite