Shannon Jones McCall | Scholars@Duke

Shannon Jones McCall
Associate Professor of Pathology

As Vice Chair for Translational Research in the Department of Pathology, I am involved in numerous translational cancer research projects that rely on the study of human biological samples. I am the director of the Duke BioRepository & Precision Pathology Center (Duke BRPC), a shared resource of the School of Medicine and the Duke Cancer Institute. I serve as the PI for the National Cancer Institute's Cooperative Human Tissue Network Southern Division (a five-year UM1 grant), which lives in the Duke BRPC. My own area of research interest is gastrointestinal tract metaplasias and their relationship to carcinogenesis, particularly in the upper GI tract.

Current Appointments & Affiliations

Associate Professor of Pathology, Pathology, Clinical Science Departments 2016
Assistant Professor in Surgery, Surgery, Surgical Sciences, Surgery 2016
Member of the Duke Cancer Institute, Duke Cancer Institute, Institutes and Centers 2017

Contact Information

Dept of Pathology Box 3712, Room 327C Davison Building, Durham, NC 27710
Duke Box 3712, Room 327C Davison Bldg, Durham, NC 27710
(919) 684-2531

Background
Education, Training, & Certifications
- Clinical Informatics, American Board of Pathology (ABPath), American Board of Pathology 2017
- Anatomic and Clinical Pathology, American Board of Pathology (ABPath), American Board of Pathology 2005
- Resident, Pathology, Duke University 2000 - 2005
- Chief Resident, Pathology, Duke University 2004 - 2005
- M.D., Duke University 2000
- B.S., North Carolina State University 1996
Duke Appointment History
- Assistant Professor of Pathology, Pathology, Clinical Science Departments 2010 - 2016
- Member of the Duke Cancer Institute, Duke Cancer Institute, Institutes and Centers 2000 - 2016
- Adjunct Assistant Professor in the Department of Pathology, Pathology, Clinical Science Departments 2007 - 2010
- Adjunct Assistant Professor in the Department of Pathology, Pathology, Clinical Science Departments 2006 - 2007
- Assistant Professor of Pathology, Pathology, Clinical Science Departments 2006
- Associate in the Department of Pathology, Pathology, Clinical Science Departments 2005 - 2006
- Instructor, Temporary of Pathology, Pathology, Clinical Science Departments 2005
Recognition
In the News
- JUL 31, 2017 Medical Physics Web
  
  X-ray diffraction spectra classify breast tissue
- JAN 4, 2017
  
  Medical Xpress: Study sheds light on esophageal cancer
- DEC 21, 2016
  
  New breast cancer therapy targets common genetic mutation
- DEC 14, 2016
  
  Science News: Common breast cancer mutation could be vulnerable to drug combination
- MAR 1, 2015
  
  How satisfied are physicians with labs? Study digs deep.
- SEP 4, 2014
  
  Four Distinct Subtypes of Gastric Cancer Found
- JUL 24, 2014
  
  Medscape: New Classification of Gastric Cancer Spurs Targeted Therapy
- JUL 23, 2014
  
  New view of stomach cancer could hasten better therapies
- JUN 9, 2014
  
  Shared Resource Profile: Biospecimen Repository & Processing Core
- APR 25, 2014
  
  DTMI Profile: Shannon J. McCall, MD; Director of Biorepository by Day, Computer Techie by Night
Awards & Honors
Expertise
Subject Headings
Research
Selected Grants
- Cooperative Human Tissue Network Support through Duke's BioRepository & Precision Pathology Center awarded by National Institutes of Health 2019 - 2024
- Integrated Acoustofluidic Plasmonic Molecular Diagnostic System for Detecting MicroRNA Biomarkers awarded by National Institutes of Health 2020 - 2023
- Project GENIE Steering Committee Resolution Part II awarded by American Association for Cancer Research 2018 - 2023
- Epigenomic Reprogramming in Patient Derived Models of Colorectal Cancer awarded by National Institutes of Health 2018 - 2023
- The role of gastrin in esophageal submucosal gland acinar ductal metaplasia awarded by National Institutes of Health 2018 - 2023
- Mutation analysis of pap smear samples and associated tissues for ovarian cancer diagnostics 2017 - 2022
- Targeting tumor-specific apoptosis regulation in advanced ER+ breast cancer awarded by Department of Defense 2019 - 2022
- Duke BRPC sub-contract with Leidos Biomed for NCI CPTAC III (Options 4-8) 2018 - 2020
- Characterization of Tumor Immunobiological Factors that Promote Lymphovascular Invasion and Dissemination in Locally Advanced Breast Cancer awarded by Department of Defense 2017 - 2020
- Preoperative Breast Radiotherapy: A Tool to Provide Individualized and Biologically-Based Radiation Therapy 2015 - 2020
- Targeting differential apoptosis regulation in triple negative breast cancer awarded by Department of Defense 2016 - 2019
- Lung Tissue Gene Expression Profiling in Chronic Lung Allograft Dysfunction-CTOT awarded by Mount Sinai School of Medicine 2018 - 2019
- Rapid X-ray diffraction imaging for improved tissue analysis in pathologic applications 2017 - 2019
- ROCHE DIAGNOSTICS CORPORATION WORKFLOW ANALYSIS AGREEMENT 2018 - 2019
- Empowering Duke's Precision Pathology Center with Quantitative Image Analysis to Support Discovery, Diagnostic Assay Development, and Immune Cell Monitoring 2018 - 2019
- Lung Squamous Cell Carcinoma: Validation of Molecular Signatures of Prognosis 2012 - 2017
- The genetics of hepatosplenic T cell lymphoma awarded by National Institutes of Health 2015 - 2017
- The effect of pre-analytical variables on the ability to detect PD-L1 by immunohistochemical staining of placental tissu 2014 - 2015
- TCGA Contract 2013 - 2014
Publications & Artistic Works
Selected Publications
- Academic Articles
  - Mccall, Shannon J. “Toward Improving Practices for Submission of Diagnostic Tissue Blocks for National Cancer Institute Clinical Trials..” Am J Clin Pathol 153, no. 2 (January 2, 2020): 146–48. https://doi.org/10.1093/ajcp/aqz157.
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  - McCall, Shannon J., and Sarah M. Dry. “Precision Pathology as Part of Precision Medicine: Are We Optimizing Patients’ Interests in Prioritizing Use of Limited Tissue Samples?.” Jco Precision Oncology, no. 3 (November 2019): 1–6. https://doi.org/10.1200/po.18.00238.
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  - Regan, Jessica A., Bryan Golubski, Elizabeth B. Gilbert, Brian Sullivan, Shannon J. McCall, and Suchita S. Sata. “Glycogenic Hepatopathy Causing Elevated Lactic Acid and Liver Enzymes..” Am J Med, July 29, 2019. https://doi.org/10.1016/j.amjmed.2019.07.018.
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  - Pabla, Sarabjot, Jeffrey M. Conroy, Mary K. Nesline, Sean T. Glenn, Antonios Papanicolau-Sengos, Blake Burgher, Jacob Hagen, et al. “Proliferative potential and resistance to immune checkpoint blockade in lung cancer patients..” J Immunother Cancer 7, no. 1 (February 1, 2019). https://doi.org/10.1186/s40425-019-0506-3.
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  - Conroy, Jeffrey M., Sarabjot Pabla, Mary K. Nesline, Sean T. Glenn, Antonios Papanicolau-Sengos, Blake Burgher, Jonathan Andreas, et al. “Next generation sequencing of PD-L1 for predicting response to immune checkpoint inhibitors..” J Immunother Cancer 7, no. 1 (January 24, 2019). https://doi.org/10.1186/s40425-018-0489-5.
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  - Altunel, Erdem, Abed Alhalim Aljamal, John Mantyh, Kristen Deak, Wayne Glover, Shannon J. McCall, Michael Datto, John Strickler, and David S. Hsu. “Characterization of the Epidermal Growth Factor Receptor T790M Mutation in Colorectal Cancer.” Jco Precision Oncology, no. 2 (November 2018): 1–7. https://doi.org/10.1200/po.18.00194.
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  - Wang, Yumeng, Xiaoyan Xu, Dejan Maglic, Michael T. Dill, Kamalika Mojumdar, Patrick Kwok-Shing Ng, Kang Jin Jeong, et al. “Comprehensive Molecular Characterization of the Hippo Signaling Pathway in Cancer..” Cell Rep 25, no. 5 (October 30, 2018): 1304-1317.e5. https://doi.org/10.1016/j.celrep.2018.10.001.
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  - Korkut, Anil, Sobia Zaidi, Rupa S. Kanchi, Shuyun Rao, Nancy R. Gough, Andre Schultz, Xubin Li, et al. “A Pan-Cancer Analysis Reveals High-Frequency Genetic Alterations in Mediators of Signaling by the TGF-β Superfamily..” Cell Syst 7, no. 4 (October 24, 2018): 422-437.e7. https://doi.org/10.1016/j.cels.2018.08.010.
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  - Kahles, André, Kjong-Van Lehmann, Nora C. Toussaint, Matthias Hüser, Stefan G. Stark, Timo Sachsenberg, Oliver Stegle, et al. “Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients..” Cancer Cell 34, no. 2 (August 13, 2018): 211-224.e6. https://doi.org/10.1016/j.ccell.2018.07.001.
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  - Bailey, Matthew H., Collin Tokheim, Eduard Porta-Pardo, Sohini Sengupta, Denis Bertrand, Amila Weerasinghe, Antonio Colaprico, et al. “Comprehensive Characterization of Cancer Driver Genes and Mutations..” Cell 174, no. 4 (August 9, 2018): 1034–35. https://doi.org/10.1016/j.cell.2018.07.034.
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  - Garman, Katherine S., and Shannon J. McCall. “Esophageal submucosal glands as a potential source of subsquamous intestinal metaplasia in Barrett's esophagus..” Gastrointest Endosc 88, no. 1 (July 2018): 200–201. https://doi.org/10.1016/j.gie.2018.01.027.
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  - Ricketts, Christopher J., Aguirre A. De Cubas, Huihui Fan, Christof C. Smith, Martin Lang, Ed Reznik, Reanne Bowlby, et al. “The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma..” Cell Rep 23, no. 12 (June 19, 2018). https://doi.org/10.1016/j.celrep.2018.06.032.
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  - Siena, S., A. Sartore-Bianchi, S. Marsoni, H. I. Hurwitz, S. J. McCall, F. Penault-Llorca, S. Srock, A. Bardelli, and L. Trusolino. “Targeting the human epidermal growth factor receptor 2 (HER2) oncogene in colorectal cancer..” Ann Oncol 29, no. 5 (May 1, 2018): 1108–19. https://doi.org/10.1093/annonc/mdy100.
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  - Thorsson, Vésteinn, David L. Gibbs, Scott D. Brown, Denise Wolf, Dante S. Bortone, Tai-Hsien Ou Yang, Eduard Porta-Pardo, et al. “The Immune Landscape of Cancer..” Immunity 48, no. 4 (April 17, 2018): 812-830.e14. https://doi.org/10.1016/j.immuni.2018.03.023.
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  - Berger, Ashton C., Anil Korkut, Rupa S. Kanchi, Apurva M. Hegde, Walter Lenoir, Wenbin Liu, Yuexin Liu, et al. “A Comprehensive Pan-Cancer Molecular Study of Gynecologic and Breast Cancers..” Cancer Cell 33, no. 4 (April 9, 2018): 690-705.e9. https://doi.org/10.1016/j.ccell.2018.03.014.
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  - Liu, Yang, Nilay S. Sethi, Toshinori Hinoue, Barbara G. Schneider, Andrew D. Cherniack, Francisco Sanchez-Vega, Jose A. Seoane, et al. “Comparative Molecular Analysis of Gastrointestinal Adenocarcinomas..” Cancer Cell 33, no. 4 (April 9, 2018): 721-735.e8. https://doi.org/10.1016/j.ccell.2018.03.010.
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  - Taylor, Alison M., Juliann Shih, Gavin Ha, Galen F. Gao, Xiaoyang Zhang, Ashton C. Berger, Steven E. Schumacher, et al. “Genomic and Functional Approaches to Understanding Cancer Aneuploidy..” Cancer Cell 33, no. 4 (April 9, 2018): 676-689.e3. https://doi.org/10.1016/j.ccell.2018.03.007.
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  - Wang, Zehua, Bo Yang, Min Zhang, Weiwei Guo, Zhiyuan Wu, Yue Wang, Lin Jia, et al. “lncRNA Epigenetic Landscape Analysis Identifies EPIC1 as an Oncogenic lncRNA that Interacts with MYC and Promotes Cell-Cycle Progression in Cancer..” Cancer Cell 33, no. 4 (April 9, 2018): 706-720.e9. https://doi.org/10.1016/j.ccell.2018.03.006.
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  - Bailey, Matthew H., Collin Tokheim, Eduard Porta-Pardo, Sohini Sengupta, Denis Bertrand, Amila Weerasinghe, Antonio Colaprico, et al. “Comprehensive Characterization of Cancer Driver Genes and Mutations..” Cell 173, no. 2 (April 5, 2018): 371-385.e18. https://doi.org/10.1016/j.cell.2018.02.060.
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  - Chen, Han, Chunyan Li, Xinxin Peng, Zhicheng Zhou, John N. Weinstein, John N. Cancer Genome Atlas Research Network, and Han Liang. “A Pan-Cancer Analysis of Enhancer Expression in Nearly 9000 Patient Samples..” Cell 173, no. 2 (April 5, 2018): 386-399.e12. https://doi.org/10.1016/j.cell.2018.03.027.
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  - Ding, Li, Matthew H. Bailey, Eduard Porta-Pardo, Vesteinn Thorsson, Antonio Colaprico, Denis Bertrand, David L. Gibbs, et al. “Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics..” Cell 173, no. 2 (April 5, 2018): 305-320.e10. https://doi.org/10.1016/j.cell.2018.03.033.
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  - Hoadley, Katherine A., Christina Yau, Toshinori Hinoue, Denise M. Wolf, Alexander J. Lazar, Esther Drill, Ronglai Shen, et al. “Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer..” Cell 173, no. 2 (April 5, 2018): 291-304.e6. https://doi.org/10.1016/j.cell.2018.03.022.
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  - Huang, Kuan-Lin, R Jay Mashl, Yige Wu, Deborah I. Ritter, Jiayin Wang, Clara Oh, Marta Paczkowska, et al. “Pathogenic Germline Variants in 10,389 Adult Cancers..” Cell 173, no. 2 (April 5, 2018): 355-370.e14. https://doi.org/10.1016/j.cell.2018.03.039.
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  - Liu, Jianfang, Tara Lichtenberg, Katherine A. Hoadley, Laila M. Poisson, Alexander J. Lazar, Andrew D. Cherniack, Albert J. Kovatich, et al. “An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics..” Cell 173, no. 2 (April 5, 2018): 400-416.e11. https://doi.org/10.1016/j.cell.2018.02.052.
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  - Malta, Tathiane M., Artem Sokolov, Andrew J. Gentles, Tomasz Burzykowski, Laila Poisson, John N. Weinstein, Bożena Kamińska, et al. “Machine Learning Identifies Stemness Features Associated with Oncogenic Dedifferentiation..” Cell 173, no. 2 (April 5, 2018): 338-354.e15. https://doi.org/10.1016/j.cell.2018.03.034.
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  - Sanchez-Vega, Francisco, Marco Mina, Joshua Armenia, Walid K. Chatila, Augustin Luna, Konnor C. La, Sofia Dimitriadoy, et al. “Oncogenic Signaling Pathways in The Cancer Genome Atlas..” Cell 173, no. 2 (April 5, 2018): 321-337.e10. https://doi.org/10.1016/j.cell.2018.03.035.
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  - Campbell, Joshua D., Christina Yau, Reanne Bowlby, Yuexin Liu, Kevin Brennan, Huihui Fan, Alison M. Taylor, et al. “Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas..” Cell Rep 23, no. 1 (April 3, 2018): 194-212.e6. https://doi.org/10.1016/j.celrep.2018.03.063.
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  - Chiu, Hua-Sheng, Sonal Somvanshi, Ektaben Patel, Ting-Wen Chen, Vivek P. Singh, Barry Zorman, Sagar L. Patil, et al. “Pan-Cancer Analysis of lncRNA Regulation Supports Their Targeting of Cancer Genes in Each Tumor Context..” Cell Rep 23, no. 1 (April 3, 2018): 297-312.e12. https://doi.org/10.1016/j.celrep.2018.03.064.
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  - Gao, Qingsong, Wen-Wei Liang, Steven M. Foltz, Gnanavel Mutharasu, Reyka G. Jayasinghe, Song Cao, Wen-Wei Liao, et al. “Driver Fusions and Their Implications in the Development and Treatment of Human Cancers..” Cell Rep 23, no. 1 (April 3, 2018): 227-238.e3. https://doi.org/10.1016/j.celrep.2018.03.050.
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  - Ge, Zhongqi, Jake S. Leighton, Yumeng Wang, Xinxin Peng, Zhongyuan Chen, Hu Chen, Yutong Sun, et al. “Integrated Genomic Analysis of the Ubiquitin Pathway across Cancer Types..” Cell Rep 23, no. 1 (April 3, 2018): 213-226.e3. https://doi.org/10.1016/j.celrep.2018.03.047.
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  - Jayasinghe, Reyka G., Song Cao, Qingsong Gao, Michael C. Wendl, Nam Sy Vo, Sheila M. Reynolds, Yanyan Zhao, et al. “Systematic Analysis of Splice-Site-Creating Mutations in Cancer..” Cell Rep 23, no. 1 (April 3, 2018): 270-281.e3. https://doi.org/10.1016/j.celrep.2018.03.052.
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  - Knijnenburg, Theo A., Linghua Wang, Michael T. Zimmermann, Nyasha Chambwe, Galen F. Gao, Andrew D. Cherniack, Huihui Fan, et al. “Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas..” Cell Rep 23, no. 1 (April 3, 2018): 239-254.e6. https://doi.org/10.1016/j.celrep.2018.03.076.
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  - Peng, Xinxin, Zhongyuan Chen, Farshad Farshidfar, Xiaoyan Xu, Philip L. Lorenzi, Yumeng Wang, Feixiong Cheng, et al. “Molecular Characterization and Clinical Relevance of Metabolic Expression Subtypes in Human Cancers..” Cell Rep 23, no. 1 (April 3, 2018): 255-269.e4. https://doi.org/10.1016/j.celrep.2018.03.077.
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  - Ricketts, Christopher J., Aguirre A. De Cubas, Huihui Fan, Christof C. Smith, Martin Lang, Ed Reznik, Reanne Bowlby, et al. “The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma..” Cell Rep 23, no. 1 (April 3, 2018): 313-326.e5. https://doi.org/10.1016/j.celrep.2018.03.075.
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  - Saltz, Joel, Rajarsi Gupta, Le Hou, Tahsin Kurc, Pankaj Singh, Vu Nguyen, Dimitris Samaras, et al. “Spatial Organization and Molecular Correlation of Tumor-Infiltrating Lymphocytes Using Deep Learning on Pathology Images..” Cell Rep 23, no. 1 (April 3, 2018): 181-193.e7. https://doi.org/10.1016/j.celrep.2018.03.086.
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  - Seiler, Michael, Shouyong Peng, Anant A. Agrawal, James Palacino, Teng Teng, Ping Zhu, Peter G. Smith, Peter G. Cancer Genome Atlas Research Network, Silvia Buonamici, and Lihua Yu. “Somatic Mutational Landscape of Splicing Factor Genes and Their Functional Consequences across 33 Cancer Types..” Cell Rep 23, no. 1 (April 3, 2018): 282-296.e4. https://doi.org/10.1016/j.celrep.2018.01.088.
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  - Way, Gregory P., Francisco Sanchez-Vega, Konnor La, Joshua Armenia, Walid K. Chatila, Augustin Luna, Chris Sander, et al. “Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas..” Cell Rep 23, no. 1 (April 3, 2018): 172-180.e3. https://doi.org/10.1016/j.celrep.2018.03.046.
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  - Ellrott, Kyle, Matthew H. Bailey, Gordon Saksena, Kyle R. Covington, Cyriac Kandoth, Chip Stewart, Julian Hess, et al. “Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines..” Cell Syst 6, no. 3 (March 28, 2018): 271-281.e7. https://doi.org/10.1016/j.cels.2018.03.002.
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  - Schaub, Franz X., Varsha Dhankani, Ashton C. Berger, Mihir Trivedi, Anne B. Richardson, Reid Shaw, Wei Zhao, et al. “Pan-cancer Alterations of the MYC Oncogene and Its Proximal Network across the Cancer Genome Atlas..” Cell Syst 6, no. 3 (March 28, 2018): 282-300.e2. https://doi.org/10.1016/j.cels.2018.03.003.
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  - Hemmerich, Amanda, Mohanad Shaar, Rebecca Burbridge, Cynthia D. Guy, Shannon J. McCall, Diana M. Cardona, Xuchen Zhang, Jinping Lai, and Xuefeng Zhang. “Metastatic Renal Cell Carcinoma as Solitary Subcentimeter Polypoid Gastric Mucosal Lesions: Clinicopathologic Analysis of Five Cases..” Gastroenterology Res 11, no. 1 (February 2018): 25–30. https://doi.org/10.14740/gr952w.
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  - McCall, Shannon J., Philip A. Branton, Victoria M. Blanc, Sarah M. Dry, Julie M. Gastier-Foster, James H. Harrison, Scott D. Jewell, et al. “The College of American Pathologists Biorepository Accreditation Program: Results from the First 5 Years..” Biopreserv Biobank 16, no. 1 (February 2018): 16–22. https://doi.org/10.1089/bio.2017.0108.
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  - Harrison, Grant, Amanda Hemmerich, Cynthia Guy, Kathryn Perkinson, Debra Fleming, Shannon McCall, Diana Cardona, and Xuefeng Zhang. “Overexpression of SOX11 and TFE3 in Solid-Pseudopapillary Neoplasms of the Pancreas..” Am J Clin Pathol 149, no. 1 (December 20, 2017): 67–75. https://doi.org/10.1093/ajcp/aqx142.
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  - Yi, John S., Neal Ready, Patrick Healy, Chelsae Dumbauld, Robyn Osborne, Mark Berry, Debra Shoemaker, et al. “Immune Activation in Early-Stage Non-Small Cell Lung Cancer Patients Receiving Neoadjuvant Chemotherapy Plus Ipilimumab..” Clin Cancer Res 23, no. 24 (December 15, 2017): 7474–82. https://doi.org/10.1158/1078-0432.CCR-17-2005.
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  - Singleton, Katherine R., Lorin Crawford, Elizabeth Tsui, Haley E. Manchester, Ophelia Maertens, Xiaojing Liu, Maria V. Liberti, et al. “Melanoma Therapeutic Strategies that Select against Resistance by Exploiting MYC-Driven Evolutionary Convergence..” Cell Rep 21, no. 10 (December 5, 2017): 2796–2812. https://doi.org/10.1016/j.celrep.2017.11.022.
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  - Furstenberg, Richard J. von, Joy Li, Christina Stolarchuk, Rachel Feder, Alexa Campbell, Leandi Kruger, Liara M. Gonzalez, et al. “Porcine Esophageal Submucosal Gland Culture Model Shows Capacity for Proliferation and Differentiation..” Cell Mol Gastroenterol Hepatol 4, no. 3 (November 2017): 385–404. https://doi.org/10.1016/j.jcmgh.2017.07.005.
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  - Krüger, Leandi, Liara M. Gonzalez, Tiffany A. Pridgen, Shannon J. McCall, Richard J. von Furstenberg, Ivan Harnden, Gwendolyn E. Carnighan, Abigail M. Cox, Anthony T. Blikslager, and Katherine S. Garman. “Ductular and proliferative response of esophageal submucosal glands in a porcine model of esophageal injury and repair..” Am J Physiol Gastrointest Liver Physiol 313, no. 3 (September 1, 2017): G180–91. https://doi.org/10.1152/ajpgi.00036.2017.
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  - Anderson, Grace R., Peter S. Winter, Kevin H. Lin, Daniel P. Nussbaum, Merve Cakir, Elizabeth M. Stein, Ryan S. Soderquist, et al. “A Landscape of Therapeutic Cooperativity in KRAS Mutant Cancers Reveals Principles for Controlling Tumor Evolution..” Cell Rep 20, no. 4 (July 25, 2017): 999–1015. https://doi.org/10.1016/j.celrep.2017.07.006.
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  - Volmar, Keith E., Shannon J. McCall, Ronald B. Schifman, Michael L. Talbert, Joseph A. Tworek, Keren I. Hulkower, Anthony J. Guidi, et al. “Professional Practice Evaluation for Pathologists: The Development, Life, and Death of the Evalumetrics Program..” Arch Pathol Lab Med 141, no. 4 (April 2017): 551–58. https://doi.org/10.5858/arpa.2016-0275-CP.
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  - Cancer Genome Atlas Research Network, V. V., V. V. Analysis Working Group: Asan University, V. V. BC Cancer Agency, V. V. Brigham and Women’s Hospital, V. V. Broad Institute, V. V. Brown University, V. V. Case Western Reserve University, et al. “Integrated genomic characterization of oesophageal carcinoma..” Nature 541, no. 7636 (January 12, 2017): 169–75. https://doi.org/10.1038/nature20805.
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  - Andry, Chris, Elizabeth Duffy, Christopher A. Moskaluk, Shannon McCall, Michael H. A. Roehrl, and Daniel Remick. “Biobanking-Budgets and the Role of Pathology Biobanks in Precision Medicine..” Acad Pathol 4 (January 2017). https://doi.org/10.1177/2374289517702924.
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  - Anderson, Grace R., Suzanne E. Wardell, Merve Cakir, Lorin Crawford, Jim C. Leeds, Daniel P. Nussbaum, Pallavi S. Shankar, et al. “PIK3CA mutations enable targeting of a breast tumor dependency through mTOR-mediated MCL-1 translation..” Sci Transl Med 8, no. 369 (December 14, 2016). https://doi.org/10.1126/scitranslmed.aae0348.
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  - Patel, Yuval A., Shannon J. McCall, Xuefeng Zhang, Tracy Jaffe, and Rahul A. Shimpi. “Radiographic and endoscopic regression of metastatic gastric cancer to the colon in the setting of 5-aminosalicylic acid use..” J Gastrointest Oncol 7, no. 6 (December 2016): E88–92. https://doi.org/10.21037/jgo.2016.05.02.
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  - Hesler, Rachel A., Jennifer J. Huang, Mark D. Starr, Victoria M. Treboschi, Alyssa G. Bernanke, Andrew B. Nixon, Shannon J. McCall, Rebekah R. White, and Gerard C. Blobe. “TGF-β-induced stromal CYR61 promotes resistance to gemcitabine in pancreatic ductal adenocarcinoma through downregulation of the nucleoside transporters hENT1 and hCNT3..” Carcinogenesis 37, no. 11 (November 1, 2016): 1041–51. https://doi.org/10.1093/carcin/bgw093.
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  - McCall, Shannon J., Rhona J. Souers, Barbara Blond, and Larry Massie. “Physician Satisfaction With Clinical Laboratory Services: A College of American Pathologists Q-Probes Study of 81 Institutions..” Arch Pathol Lab Med 140, no. 10 (October 2016): 1098–1103. https://doi.org/10.5858/arpa.2015-0486-CP.
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  - Wood, Kris C., Grace R. Anderson, Suzanne E. Wardell, Jeff S. Jasper, Elizabeth M. Stein, Colin A. Martz, Holly M. Alley, et al. “Identification and Therapeutic Inhibition of Pathways Driving Resistance to Targeted Breast Cancer Therapies.” Journal of Womens Health 25, no. 9 (September 1, 2016): 976–976.
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  - Kapadia, A., R. Morris, K. Albanese, J. Spencer, S. McCall, and J. Greenberg. “TH-AB-209-10: Breast Cancer Identification Through X-Ray Coherent Scatter Spectral Imaging..” Med Phys 43, no. 6 (June 2016). https://doi.org/10.1118/1.4958101.
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  - Ludmir, Ethan B., Shannon J. McCall, Diana M. Cardona, Kathryn R. Perkinson, Cynthia D. Guy, and Xuefeng Zhang. “Mixed Adenoneuroendocrine Carcinoma, Amphicrine Type, of the Small Bowel..” Am J Clin Pathol 145, no. 5 (May 2016): 703–9. https://doi.org/10.1093/ajcp/aqw028.
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  - Detweiler, Claire J., Diana M. Cardona, David S. Hsu, and Shannon J. McCall. “Primary high-grade neuroendocrine carcinoma emerging from an adenomatous polyp in the setting of familial adenomatous polyposis..” Bmj Case Rep 2016 (February 16, 2016). https://doi.org/10.1136/bcr-2015-214206.
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  - Zhang, xuefeng, rebecca Burbridge, malcolm Branch, S. Xiao, lei Zhao, S. J. McCall, cynthia Guy, et al. “Delayed specimen collection may artifactually damage the mucosal surface in endoscopic mucosal resection specimens from Barrett's esophagus.” American Journal of Digestive Disease 2, no. 2 (December 30, 2015): 90–94.
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  - Garman, Katherine S., Leandi Kruger, Samantha Thomas, Marzena Swiderska-Syn, Barry K. Moser, Anna Mae Diehl, and Shannon J. McCall. “Ductal metaplasia in oesophageal submucosal glands is associated with inflammation and oesophageal adenocarcinoma..” Histopathology 67, no. 6 (December 2015): 771–82. https://doi.org/10.1111/his.12707.
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  - Cancer Genome Atlas Research Network, Canc Genome Atlas. “The Molecular Taxonomy of Primary Prostate Cancer..” Cell 163, no. 4 (November 5, 2015): 1011–25. https://doi.org/10.1016/j.cell.2015.10.025.
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  - Shahid, Rafiq A., David Q-H Wang, Brian E. Fee, Shannon J. McCall, Joelle M-J Romac, Steven R. Vigna, and Rodger A. Liddle. “Endogenous elevation of plasma cholecystokinin does not prevent gallstones..” Eur J Clin Invest 45, no. 3 (March 2015): 237–46. https://doi.org/10.1111/eci.12400.
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  - Zhang, Tian, Elizabeth L. Boswell, Shannon J. McCall, and David S. Hsu. “Mismatch repair gone awry: Management of Lynch syndrome..” Crit Rev Oncol Hematol 93, no. 3 (March 2015): 170–79. https://doi.org/10.1016/j.critrevonc.2014.10.005.
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  - Zhong, Jim, Manisha Palta, Christopher G. Willett, Shannon J. McCall, Frances McSherry, Douglas S. Tyler, Hope E. Uronis, and Brian G. Czito. “Patterns of failure for stage I ampulla of Vater adenocarcinoma: a single institutional experience..” J Gastrointest Oncol 5, no. 6 (December 2014): 421–27. https://doi.org/10.3978/j.issn.2078-6891.2014.084.
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  - Ludmir, Ethan B., Shannon J. McCall, Brian G. Czito, and Manisha Palta. “Radiosensitive orbital metastasis as presentation of occult colonic adenocarcinoma..” Bmj Case Rep 2014 (September 19, 2014). https://doi.org/10.1136/bcr-2014-206407.
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  - Cancer Genome Atlas Research Network, A. J. “Comprehensive molecular characterization of gastric adenocarcinoma..” Nature 513, no. 7517 (September 11, 2014): 202–9. https://doi.org/10.1038/nature13480.
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  - Tworek, Joseph A., Keith E. Volmar, Shannon J. McCall, Christine P. Bashleben, and Peter J. Howanitz. “Q-Probes studies in anatomic pathology: quality improvement through targeted benchmarking..” Arch Pathol Lab Med 138, no. 9 (September 2014): 1156–66. https://doi.org/10.5858/arpa.2014-0149-OA.
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  - Strickler, John H., Shannon McCall, Andrew B. Nixon, John C. Brady, Herbert Pang, Christel Rushing, Allen Cohn, et al. “Phase I study of dasatinib in combination with capecitabine, oxaliplatin and bevacizumab followed by an expanded cohort in previously untreated metastatic colorectal cancer..” Invest New Drugs 32, no. 2 (April 2014): 330–39. https://doi.org/10.1007/s10637-013-0042-9.
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  - Zhong, Jim, Manisha Palta, Christopher G. Willett, Shannon J. McCall, Anuradha Bulusu, Douglas S. Tyler, Rebekah R. White, Hope E. Uronis, Theodore N. Pappas, and Brian G. Czito. “The role of local excision in invasive adenocarcinoma of the ampulla of Vater..” J Gastrointest Oncol 4, no. 1 (March 2013): 8–13. https://doi.org/10.3978/j.issn.2078-6891.2012.055.
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  - Guy, Cynthia D., Ayako Suzuki, James L. Burchette, Elizabeth M. Brunt, Manal F. Abdelmalek, Diana Cardona, Shannon J. McCall, et al. “Costaining for keratins 8/18 plus ubiquitin improves detection of hepatocyte injury in nonalcoholic fatty liver disease..” Hum Pathol 43, no. 6 (June 2012): 790–800. https://doi.org/10.1016/j.humpath.2011.07.007.
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  - Czito, B. G., C. Willett, M. Palta, S. McCall, N. Gee, H. Hurwitz, R. E. Coleman, Y. Zafar, P. Kennedy-Newton, and H. Uronis. “A phase I/II study of capecitabine (Cape), oxaliplatin (Ox), panitumumab (Pmab), and external beam radiation therapy (RT) for patients with esophagogastric carcinoma (EC)..” J Clin Oncol 30, no. 4_suppl (February 2012).
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  - Uronis, Joshua M., Takuya Osada, Shannon McCall, Xiao Yi Yang, Christopher Mantyh, Michael A. Morse, H Kim Lyerly, Bryan M. Clary, and David S. Hsu. “Histological and molecular evaluation of patient-derived colorectal cancer explants..” Plos One 7, no. 6 (2012). https://doi.org/10.1371/journal.pone.0038422.
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  - Omenetti, Alessia, Lee M. Bass, Robert A. Anders, Maria G. Clemente, Heather Francis, Cynthia D. Guy, Shannon McCall, et al. “Hedgehog activity, epithelial-mesenchymal transitions, and biliary dysmorphogenesis in biliary atresia..” Hepatology 53, no. 4 (April 2011): 1246–58. https://doi.org/10.1002/hep.24156.
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  - Rossol-Allison, Jessica, Laura N. Stemmle, Katherine I. Swenson-Fields, Patrick Kelly, Patrick E. Fields, Shannon J. McCall, Patrick J. Casey, and Timothy A. Fields. “Rho GTPase activity modulates Wnt3a/beta-catenin signaling..” Cell Signal 21, no. 11 (November 2009): 1559–68. https://doi.org/10.1016/j.cellsig.2009.05.010.
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  - Sicklick, J. K., J. Huang, S. J. McCall, M. S. Torbenson, and A. M. Diehl. “Analysis of Hepatic Progenitor Populations in Methyl Deficient Liver Injury.” Annals of Surgical Oncology 16 (February 2009): 33–33.
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  - Ouyang, Xiaosen, Pietro Cirillo, Yuri Sautin, Shannon McCall, James L. Bruchette, Anna Mae Diehl, Richard J. Johnson, and Manal F. Abdelmalek. “Fructose consumption as a risk factor for non-alcoholic fatty liver disease..” J Hepatol 48, no. 6 (June 2008): 993–99. https://doi.org/10.1016/j.jhep.2008.02.011.
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  - Romac, Joelle M. J., Shannon J. McCall, John E. Humphrey, Jinseok Heo, and Rodger A. Liddle. “Pharmacologic disruption of TRPV1-expressing primary sensory neurons but not genetic deletion of TRPV1 protects mice against pancreatitis..” Pancreas 36, no. 4 (May 2008): 394–401. https://doi.org/10.1097/MPA.0b013e318160222a.
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  - Yamaguchi, Kanji, Liu Yang, Shannon McCall, Jiawen Huang, Xing Xian Yu, Sanjay K. Pandey, Sanjay Bhanot, Brett P. Monia, Yin-Xiong Li, and Anna Mae Diehl. “Diacylglycerol acyltranferase 1 anti-sense oligonucleotides reduce hepatic fibrosis in mice with nonalcoholic steatohepatitis..” Hepatology 47, no. 2 (February 2008): 625–35. https://doi.org/10.1002/hep.21988.
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  - Adams, George L., Roberto J. Manson, Dana M. Giangiacomo, Lucy Fronheiser, Shannon McCall, Roger Nightingale, Vic Hasselblad, Linda K. Shaw, Luther Milton, and Jeffrey H. Lawson. “Effectiveness of Glycerol Mono-oleate as a Biosealant..” J Invasive Cardiol 20, no. 1 (January 2008): 29–34.
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  - Yamaguchi, Kanji, Liu Yang, Shannon McCall, Jiawen Huang, Xing Xian Yu, Sanjay K. Pandey, Sanjay Bhanot, Brett P. Monia, Yin-Xiong Li, and Anna Mae Diehl. “Inhibiting triglyceride synthesis improves hepatic steatosis but exacerbates liver damage and fibrosis in obese mice with nonalcoholic steatohepatitis..” Hepatology 45, no. 6 (June 2007): 1366–74. https://doi.org/10.1002/hep.21655.
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  - Jung, Youngmi, Shannon J. McCall, Yin-Xiong Li, and Anna Mae Diehl. “Bile ductules and stromal cells express hedgehog ligands and/or hedgehog target genes in primary biliary cirrhosis..” Hepatology 45, no. 5 (May 2007): 1091–96. https://doi.org/10.1002/hep.21660.
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  - Omenetti, Alessia, Liu Yang, Yin-Xiong Li, Shannon J. McCall, Youngmi Jung, Jason K. Sicklick, Jiawen Huang, Steve Choi, Ayako Suzuki, and Anna Mae Diehl. “Hedgehog-mediated mesenchymal-epithelial interactions modulate hepatic response to bile duct ligation..” Lab Invest 87, no. 5 (May 2007): 499–514. https://doi.org/10.1038/labinvest.3700537.
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  - Malakauskas, Sandra M., Hui Quan, Timothy A. Fields, Shannon J. McCall, Ming-Jiun Yu, Wissam M. Kourany, Campbell W. Frey, and Thu H. Le. “Aminoaciduria and altered renal expression of luminal amino acid transporters in mice lacking novel gene collectrin..” Am J Physiol Renal Physiol 292, no. 2 (February 2007): F533–44. https://doi.org/10.1152/ajprenal.00325.2006.
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  - Sicklick, Jason K., Steve S. Choi, Marcia Bustamante, Shannon J. McCall, Elizabeth Hernández Pérez, Jiawen Huang, Yin-Xiong Li, Marcos Rojkind, and Anna Mae Diehl. “Evidence for epithelial-mesenchymal transitions in adult liver cells..” Am J Physiol Gastrointest Liver Physiol 291, no. 4 (October 2006): G575–83. https://doi.org/10.1152/ajpgi.00102.2006.
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  - McCall, Shannon J., Rashid Nassar, Nadia N. Malouf, Aleister J. Saunders, Annette E. Oakeley, Paul M. Henderson, R John Solaro, Gary J. Pielak, Kenneth A. Alexander, and Page A. W. Anderson. “Development and cardiac contractility: cardiac troponin T isoforms and cytosolic calcium in rabbit..” Pediatr Res 60, no. 3 (September 2006): 276–81. https://doi.org/10.1203/01.pdr.0000233004.95404.1f.
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  - Suzuki, Ayako, Shannon McCall, Steve S. Choi, Jason K. Sicklick, Jiawen Huang, Yi Qi, Marzena Zdanowicz, Terese Camp, Yin-Xiong Li, and Anna Mae Diehl. “Interleukin-15 increases hepatic regenerative activity..” J Hepatol 45, no. 3 (September 2006): 410–18. https://doi.org/10.1016/j.jhep.2006.04.008.
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  - Hu, C. K., S. McCall, J. Madden, H. Huang, R. Clough, R. L. Jirtle, and M. S. Anscher. “Loss of heterozygosity of M6P/IGF2R gene is an early event in the development of prostate cancer..” Prostate Cancer Prostatic Dis 9, no. 1 (2006): 62–67. https://doi.org/10.1038/sj.pcan.4500842.
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  - Fields, Timothy A., Shannon J. McCall, B Diane Reams, Victor L. Roggli, Scott M. Palmer, and David N. Howell. “Pulmonary embolization of microcrystalline cellulose in a lung transplant recipient..” J Heart Lung Transplant 24, no. 5 (May 2005): 624–27. https://doi.org/10.1016/j.healun.2004.01.023.
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  - McCall, Shannon J., Janet E. Tuttle-Newhall, David N. Howell, and Timothy A. Fields. “Prognostic significance of microvascular thrombosis in donor kidney allograft biopsies..” Transplantation 75, no. 11 (June 15, 2003): 1847–52. https://doi.org/10.1097/01.TP.0000063126.88887.68.
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  - Sun, Zhifei. “Metastatic Gallbladder Cancer Masquerading as Primary Colon Malignancy.” Clinical Medical Reviews and Case Reports 2, no. 3 (n.d.). https://doi.org/10.23937/2378-3656/1410024.
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- Book Sections
  - Nakhleh, Raouf E. “Error Reduction and Prevention in Surgical Pathology.” Springer, 2015.
- Conference Papers
  - Devi, G., P. Finetti, J. Geradts, S. McCall, M. Morse, J. Van Laere, and F. Bertucci. “Expression of x-linked inhibitor of apoptosis protein (XIAP) and its association with clinicopathological parameters in invasive breast cancers.” In Annals of Oncology, 30:92-+. OXFORD UNIV PRESS, 2019.
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  - Labriola, Matthew, Jason Zhu, Rajan Gupta, Shannon McCall, Jennifer Jackson, James R. White, Elizabeth Weingartner, et al. “Characterization of tumor mutational burden (TMB), PD-L1, and DNA repair genes to assess correlation with immune checkpoint inhibitors (ICIs) response in metastatic renal cell carcinoma (mRCC)..” In Journal of Clinical Oncology, 37:e16079–e16079. American Society of Clinical Oncology (ASCO), 2019. https://doi.org/10.1200/jco.2019.37.15_suppl.e16079.
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  - Labriola, Matthew, Jason Zhu, Sachica Cheris, Xin Liu, Kathryn Perkinson, Zuowei Su, Shannon McCall, et al. “Concordance between PD-L1 assays for metastatic renal cell carcinoma (mRCC) and metastatic urothelial carcinoma (mUC)..” In Journal of Clinical Oncology, 37:e14259–e14259. American Society of Clinical Oncology (ASCO), 2019. https://doi.org/10.1200/jco.2019.37.15_suppl.e14259.
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  - Zhu, Jason, Sarabjot Pabla, Matthew Labriola, Rajan T. Gupta, Shannon McCall, Daniel J. George, Devin Dressman, et al. “Evaluation of tumor microenvironment and biomarkers of immune checkpoint inhibitor (ICI) response in metastatic renal cell carcinoma (mRCC)..” In Journal of Clinical Oncology, 37:2595–2595. American Society of Clinical Oncology (ASCO), 2019. https://doi.org/10.1200/jco.2019.37.15_suppl.2595.
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  - Glenn, Sean T., Sarabjot Pabla, Jason Zhu, Matthew Labriola, Rajan Gupta, Daniel J. George, Shannon McCall, et al. “Cell proliferation as a biomarker for response to immune checkpoint inhibitors in PD-L1 negative renal cell carcinoma..” In Journal of Clinical Oncology, 37:62–62. American Society of Clinical Oncology (ASCO), 2019. https://doi.org/10.1200/jco.2019.37.8_suppl.62.
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  - Pabla, Sarabjot, Jason Zhu, Matthew Labriola, Rajan Gupta, Daniel J. George, Shannon McCall, Edwin Yau, et al. “Cell proliferation as a biomarker for response to immune checkpoint inhibitors in highly inflamed renal cell carcinoma..” In Journal of Clinical Oncology, 37:61–61. American Society of Clinical Oncology (ASCO), 2019. https://doi.org/10.1200/jco.2019.37.8_suppl.61.
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  - Zhu, Jason, Sarabjot Pabla, Matthew Labriola, Rajan T. Gupta, Shannon McCall, Daniel J. George, Devin Dressman, et al. “Evaluation of tumor microenvironment and biomarkers of immune checkpoint inhibitor (ICI) response in metastatic renal cell carcinoma (mRCC)..” In Journal of Clinical Oncology, 37:63–63. American Society of Clinical Oncology (ASCO), 2019. https://doi.org/10.1200/jco.2019.37.8_suppl.63.
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  - Labriola, Matthew, Jason Zhu, Rajan Gupta, Shannon McCall, Jennifer Jackson, James R. White, Elizabeth Weingartner, et al. “Characterization of tumor mutational burden (TMB), PD-L1, and DNA repair genes to assess correlation with immune checkpoint inhibitors (ICIs) response in metastatic renal cell carcinoma (mRCC)..” In Journal of Clinical Oncology, 37:589–589. American Society of Clinical Oncology (ASCO), 2019. https://doi.org/10.1200/jco.2019.37.7_suppl.589.
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  - Labriola, Matthew, Jason Zhu, Rajan Gupta, Shannon McCall, Jennifer Jackson, James R. White, Elizabeth Weingartner, et al. “Characterization of genomic alterations as biomarkers of immune checkpoint inhibitor (ICI) response in metastatic urothelial carcinoma (mUC)..” In Journal of Clinical Oncology, 37:400–400. American Society of Clinical Oncology (ASCO), 2019. https://doi.org/10.1200/jco.2019.37.7_suppl.400.
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  - Zhu, Jason, Matthew Labriola, Sachica Cheris, Xin Liu, Kathryn Perkinson, Zuowei Su, Shannon McCall, et al. “Concordance between PD-L1 assays for metastatic renal cell carcinoma (mRCC) and metastatic urothelial carcinoma (mUC)..” In Journal of Clinical Oncology, 37:577–577. American Society of Clinical Oncology (ASCO), 2019. https://doi.org/10.1200/jco.2019.37.7_suppl.577.
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  - Zhu, Jason, Sarabjot Pabla, Matthew Labriola, Rajan T. Gupta, Shannon McCall, Daniel J. George, Devin Dressman, et al. “Evaluation of tumor microenvironment and biomarkers of immune checkpoint inhibitor (ICI) response in metastatic renal cell carcinoma (mRCC)..” In Journal of Clinical Oncology, 37:607–607. American Society of Clinical Oncology (ASCO), 2019. https://doi.org/10.1200/jco.2019.37.7_suppl.607.
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  - Patierno, Brendon, Wayne Glover, Thomas Ribar, Rick Kittles, Wen-Chi Foo, Shannon McCall, Jiaoti Huang, et al. “Establishment of African American prostate cancer patient-derived primary cell lines and xenografts..” In Cancer Epidemiology Biomarkers & Prevention, 27:96–96. AMER ASSOC CANCER RESEARCH, 2018.
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  - Nacouzi, D., J. Spencer, B. Zhao, C. Leung, S. McCall, J. Greenberg, and A. Kapadia. “Smarter Cancer Detection Through Machine-Learning Applied to High-Resolution Diffraction Tissue Scanning.” In Medical Physics, 45:E503–E503. WILEY, 2018.
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  - Schild, Michael, Liyan Xu, Ayako Suzuki, Diana Cardona, Lani Clinton, Shannon McCall, Avani Pendse, et al. “Sonic Hedgehog Immunohistochemistry Improves Inter-observer Agreement for Ballooning and the Diagnosis of Nonalcoholic Steatohepatitis (NASH) among Less Experienced Liver Pathologists.” In Modern Pathology, 31:648–49. NATURE PUBLISHING GROUP, 2018.
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  - Schild, Michael, Liyan Xu, Ayako Suzuki, Diana Cardona, Lani Clinton, Shannon McCall, Avani Pendse, et al. “Sonic Hedgehog Immunohistochemistry Improves Inter-observer Agreement for Ballooning and the Diagnosis of Nonalcoholic Steatohepatitis (NASH) among Less Experienced Liver Pathologists.” In Laboratory Investigation, 98:648–49. NATURE PUBLISHING GROUP, 2018.
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  - Xu, Liyan, Lei Zhao, Amanda Hemmerich, Lynn Ferguson, Cynthia Guy, Shannon McCall, Diana Cardona, John Hart, and Xuefeng Zhang. “MFAP5 Distinguishes Between Benign Desmoplasia-Like Reaction and True Desmoplasia in Invasive Adenocarcinoma of the Gallbladder..” In Modern Pathology, 31:692–93. NATURE PUBLISHING GROUP, 2018.
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  - Xu, Liyan, Lei Zhao, Amanda Hemmerich, Lynn Ferguson, Cynthia Guy, Shannon McCall, Diana Cardona, John Hart, and Xuefeng Zhang. “MFAP5 Distinguishes Between Benign Desmoplasia-Like Reaction and True Desmoplasia in Invasive Adenocarcinoma of the Gallbladder..” In Laboratory Investigation, 98:692–93. NATURE PUBLISHING GROUP, 2018.
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  - Masci, A. M., S. McCall, A. Racioppi, H. J. Ellis, J. S. Obeid, B. Smith, C. Stoeckert, and J. Zheng. “Standardization of the histopathology cancer report: An ontological approach.” In Ceur Workshop Proceedings, Vol. 2285, 2018.
  - Spencer, J., J. Carter, C. Buxton, C. Leung, S. McCall, J. Greenberg, and A. Kapadia. “BEST IN PHYSICS (IMAGING): X-Ray Diffraction Spectral Imaging for Breast Cancer Assessment.” In Medical Physics, 44:3292–3292. WILEY, 2017.
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  - Harrison, Grant, Amanda Hemmerich, Diana Cardona, Cynthia Guy, Shannon McCall, and Xuefeng Zhang. “TFE3 and SOX11 as Novel Diagnostic Markers for Solid Pseudopapillary Neoplasms.” In Laboratory Investigation, 97:174A-174A. NATURE PUBLISHING GROUP, 2017.
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  - Harrison, Grant, Amanda Hemmerich, Diana Cardona, Cynthia Guy, Shannon McCall, and Xuefeng Zhang. “TFE3 and SOX11 as Novel Diagnostic Markers for Solid Pseudopapillary Neoplasms.” In Modern Pathology, 30:174A-174A, 2017.
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  - Shaar, Mohanad, Ayako Suzuki, Craig Poster, Gustaaf de Ridder, Xuefeng Zhang, Mary Kate Cronin, Shannon McCall, et al. “Serum Amyloid A (SAA) and C-Reactive Protein (CRP) Are Commonly Positive in Hepatocellular Carcinoma and Expression Levels Stratify According to Etiology and the Absence of Cirrhosis.” In Laboratory Investigation, 97:424A-425A. NATURE PUBLISHING GROUP, 2017.
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  - Shaar, Mohanad, Ayako Suzuki, Craig Poster, Gustaaf de Ridder, Xuefeng Zhang, Mary Kate Cronin, Shannon McCall, et al. “Serum Amyloid A (SAA) and C-Reactive Protein (CRP) Are Commonly Positive in Hepatocellular Carcinoma and Expression Levels Stratify According to Etiology and the Absence of Cirrhosis.” In Modern Pathology, 30:424A-425A. NATURE PUBLISHING GROUP, 2017.
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  - Shaar, Mohanad, Cynthia Guy, Shannon McCall, Diana Cardona, and Xuefeng Zhang. “Metastatic Renal Cell Carcinoma Presenting as a Solitary Subcentimeter Gastroesophageal Mucosal Polyp: Report of 5 Cases.” In Modern Pathology, 30:258A-258A, 2017.
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  - Sham, Mohanad, Cynthia Guy, Shannon McCall, Diana Cardona, and Xuefeng Zhang. “Metastatic Renal Cell Carcinoma Presenting as a Solitary Subcentimeter Gastroesophageal Mucosal Polyp: Report of 5 Cases.” In Laboratory Investigation, 97:258A-258A. NATURE PUBLISHING GROUP, 2017.
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  - Spencer, J. R., J. E. Carter, C. K. Leung, S. J. McCall, J. A. Greenberg, and A. J. Kapadia. “Coded aperture coherent scatter spectral imaging for assessment of breast cancers: An ex-vivo demonstration.” In Progress in Biomedical Optics and Imaging Proceedings of Spie, Vol. 10132, 2017. https://doi.org/10.1117/12.2253975.
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  - Harrison, Grant, Amanda Hemmerich, Cynthia Guy, Shannon J. McCall, Diana M. Cardona, and Xuefeng Zhang. “Transcription Factor E3 as a Novel Diagnostic Marker for Solid Pseudopapillary Neoplasm.” In Laboratory Investigation, 96:174A-174A. NATURE PUBLISHING GROUP, 2016.
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  - Harrison, Grant, Amanda Hemmerich, Cynthia Guy, Shannon J. McCall, Diana M. Cardona, and Xuefeng Zhang. “Transcription Factor E3 as a Novel Diagnostic Marker for Solid Pseudopapillary Neoplasm.” In Modern Pathology, 29:174A-174A, 2016.
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  - Morris, R. E., K. E. Albanese, M. N. Lakshmanan, S. J. McCall, J. A. Greenberg, and A. J. Kapadia. “Validation of coded aperture coherent scatter spectral imaging for normal and neoplastic breast tissues via surgical pathology.” In Progress in Biomedical Optics and Imaging Proceedings of Spie, Vol. 9783, 2016. https://doi.org/10.1117/12.2216974.
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  - Poster, Craig, Karen Gustafson, Emma Furth, Shannon McCall, Diana Cardona, Xuefeng Zhang, Anand Lagoo, Michalea Lefaivre, and Cynthia Guy. “Diagnosing Hepatocellular Carcinoma With Immunohistochemistry: Quantitative Assessment of Performance Characteristics for gamma-H2AX, Glypican-3, Clathrin Heavy Chain, and Glutamine Synthetase.” In Laboratory Investigation, 95:421A-421A. NATURE PUBLISHING GROUP, 2015.
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  - Poster, Craig, Karen Gustafson, Emma Furth, Shannon McCall, Diana Cardona, Xuefeng Zhang, Anand Lagoo, Michalea Lefaivre, and Cynthia Guy. “Diagnosing Hepatocellular Carcinoma With Immunohistochemistry: Quantitative Assessment of Performance Characteristics for gamma-H2AX, Glypican-3, Clathrin Heavy Chain, and Glutamine Synthetase.” In Modern Pathology, 28:421A-421A. NATURE PUBLISHING GROUP, 2015.
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  - Zessin, Amelia S., Adrian Randall, Shannon McCall, Michael B. Datto, and Shiaowen David Hsu. “Identification and validation of actionable mutations in solid tumors..” In Journal of Clinical Oncology, 32:e22149–e22149. American Society of Clinical Oncology (ASCO), 2014. https://doi.org/10.1200/jco.2014.32.15_suppl.e22149.
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  - Layne, A. C., T. J. Cummings, C. D. Guy, D. M. Cardona, R. C. Bentley, M. J. Shealy, X. Zhang, and S. J. McCall. “TTF-1 Is Expressed in a Subset of Esophageal Adenocarcinomas.” In Modern Pathology, 27:188A-188A. NATURE PUBLISHING GROUP, 2014.
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  - Layne, A. C., T. J. Cummings, C. D. Guy, D. M. Cardona, R. C. Bentley, M. J. Shealy, X. Zhang, and S. J. McCall. “TTF-1 Is Expressed in a Subset of Esophageal Adenocarcinomas.” In Laboratory Investigation, 94:188A-188A. NATURE PUBLISHING GROUP, 2014.
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  - Shealy, M. J., G. G. de Ridder, S. J. McCall, C. D. Guy, X. Zhang, and D. M. Cardona. “The Role of Eosinophils and Neuroendocrine Cell Nests in the Assessment of Gastrointestinal Biopsies in Bone Marrow Transplant Patients.” In Laboratory Investigation, 94:203A-203A. NATURE PUBLISHING GROUP, 2014.
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  - Shealy, M. J., G. G. de Ridder, S. J. McCall, C. D. Guy, X. Zhang, and D. M. Cardona. “The Role of Eosinophils and Neuroendocrine Cell Nests in the Assessment of Gastrointestinal Biopsies in Bone Marrow Transplant Patients.” In Modern Pathology, 27:203A-203A. NATURE PUBLISHING GROUP, 2014.
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  - Zhang, X., L. Zhao, C. D. Guy, S. J. McCall, D. M. Cardona, R. A. Burbridge, K. S. Garman, et al. “Delayed Specimen Collection May Artifactually Damage the Mucosal Surface in Barrett's EMR Specimens.” In Laboratory Investigation, 94:211A-211A. NATURE PUBLISHING GROUP, 2014.
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  - Zhang, X., L. Zhao, C. D. Guy, S. J. McCall, D. M. Cardona, R. A. Burbridge, K. S. Garman, et al. “Delayed Specimen Collection May Artifactually Damage the Mucosal Surface in Barrett's EMR Specimens.” In Modern Pathology, 27:211A-211A. NATURE PUBLISHING GROUP, 2014.
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  - Zhong, J., M. Palta, C. G. Willett, S. J. McCall, F. McSherry, H. E. Uronis, D. S. Tyler, and B. G. Czito. “Patterns of Failure for Stage I Ampulla of Vater Adenocarcinoma: A Single Institutional Experience.” In International Journal of Radiation Oncology Biology Physics, 87:S317–S317, 2013. https://doi.org/10.1016/j.ijrobp.2013.06.832.
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  - Strickler, John H., Shannon McCall, Andrew B. Nixon, Herbert Pang, Christel Rushing, Christy Arrowood, Sherri Haley, Kellen Meadows, and Herbert Hurwitz. “Correlation of Src activation with response to dasatinib, capecitabine, oxaliplatin, and bevacizumab in advanced solid tumors.” In Journal of Clinical Oncology, Vol. 31. AMER SOC CLINICAL ONCOLOGY, 2013.
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  - Czito, Brian G., Christopher Willett, Manisha Palta, Shannon McCall, Nathan Gee, Herbert Hurwitz, R Edward Coleman, Yousuf Zafar, Paula Kennedy-Newton, and Hope Uronis. “A phase I/II study of capecitabine (Cape), oxaliplatin (Ox), panitumumab (Pmab), and external beam radiation therapy (RT) for patients with esophagogastric carcinoma (EC)..” In Journal of Clinical Oncology, 30:68–68. American Society of Clinical Oncology (ASCO), 2012. https://doi.org/10.1200/jco.2012.30.4_suppl.68.
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  - Guy, C. D., A. Suzuki, J. L. Burchette, E. M. Brunt, M. F. Abelmalek, D. Cardona, S. J. McCall, et al. “A Novel Immunohiostochemical Staining Pattern for Keratin 8/18 Plus Ubiquitin in Nonalcoholic Fatty Liver Disease Is Associated with Increased Disease Severity and Advanced Fibrosis.” In Laboratory Investigation, 91:361A-361A. NATURE PUBLISHING GROUP, 2011.
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Teaching & Mentoring
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- PSP 301B: Research in PSP 2020
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