Skip to main content

Stacy M. Horner

Professor in Integrative Immunobiology
Integrative Immunobiology
213 Research Drive, Room 0034 CARL Bldg, Durham, NC 27710

Overview


Studying the RNA biology, cell biology, and immunology of RNA virus infection

Our lab studies the molecular mechanisms that regulate RNA virus-host interactions. We focus primarily on viruses in the Flaviviridae family of viruses, including dengue virus (DENV), Zika virus (ZIKV), and hepatitis C virus (HCV). Our research is focused on defining (1) how these viruses replicate, (2) the mechanisms that regulate antiviral innate immunity to these viruses, and (3) RNA regulatory controls to both of these processes. Our lab has pioneered approaches to how the RNA modification m6A regulates viral infection, antiviral innate immunity and the host response to virus infection. Our long-term goal is to discover the necessary mechanistic and functional information to guide future development of new strategies for virus treatment and prevention.

Lab Website

Current Duke Appointments & Affiliations


Professor in Integrative Immunobiology · 2026 - Present Integrative Immunobiology, Basic Science Departments
Associate Professor of Medicine · 2021 - Present Medicine, Infectious Diseases, Medicine
Associate Professor of Cell Biology · 2022 - Present Cell Biology, Basic Science Departments
Associate Professor of Molecular Genetics and Microbiology · 2022 - Present Molecular Genetics and Microbiology, Basic Science Departments
Member of the Duke Cancer Institute · 2014 - Present Duke Cancer Institute, Institutes and Centers
Associate of the Duke Initiative for Science & Society · 2018 - Present Duke Science & Society, University Initiatives & Academic Support Units

Recent News Items


Published March 27, 2024
The Power and Promise of RNA
Published September 21, 2021
Meet the Newly Tenured Faculty of 2021
Published April 28, 2020
Duke Scientists Studying the Shape of COVID Things to Come

View All News Items

Recent Scholarly Works


The m 6 A methyltransferase complex protein VIRMA engages hepatitis C virus RNA through a WTAP-independent mechanism.

Preprint · September 12, 2026 Cellular proteins in the m 6 A methyltransferase protein complex (m 6 A-MTC) work together to modify both cellular and viral RNAs with N6-methyladenosine (m 6 A), an RNA modification that regulates viral infection. We previously showed that hepatitis C vir ... Full text Link to item Cite

Transcript architecture sets the m 6 A landscape: CSTF2 and CSTF2T reshape m 6 A through cleavage-dependent and -independent mechanisms.

Journal article bioRxiv · June 8, 2026 Alternative RNA processing generates extensive transcript diversity, yet how transcript architecture influences selective m 6 A deposition is incompletely understood. Exon-junction-based models explain where m 6 A is excluded, but a positive determinant of ... Full text Link to item Cite

IFIT3 Associates with m⁶A-Modified RNA to Restrict Hepatitis C Virus Infection.

Journal article bioRxiv · March 26, 2026 UNLABELLED: Interferon-induced proteins with tetratricopeptide repeats (IFITs) are RNA-binding effectors that restrict infection by diverse RNA viruses. Among the IFIT family, how IFIT3 recognizes RNA remains the least understood. Here, we identify IFIT3 a ... Full text Link to item Cite
View All Scholarly Works

Recent Grants


Vaccines and Biologics Against Infectious Diseases - T32

Inst. Training Prgm or CMEMentor · Awarded by National Institutes of Health · 2026 - 2031

Cell and Molecular Biology Training Program

Inst. Training Prgm or CMEMentor · Awarded by National Institute of General Medical Sciences · 2026 - 2031

Genetics and Genomics Training Grant

Inst. Training Prgm or CMEMentor · Awarded by National Institutes of Health · 2026 - 2031

View All Grants

Education


Yale University · 2007 Ph.D.