Scholars@Duke

• Research
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  External Relationships

  • Domus Diagnostics, Inc.
• Publications & Artistic Works
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  Selected Publications

  • Academic Articles

    • Song, Xin, Felicity J. Coulter, Ming Yang, Jessica L. Smith, Fikadu G. Tafesse, William B. Messer, and John H. Reif. “A lyophilized colorimetric RT-LAMP test kit for rapid, low-cost, at-home molecular testing of SARS-CoV-2 and other pathogens.” Scientific Reports 12, no. 1 (April 2022): 7043. https://doi.org/10.1038/s41598-022-11144-5.
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    • Song, X., S. Shah, and J. Reif. “Multidimensional data organization and random access in large-scale DNA storage systems.” Theoretical Computer Science 894 (November 26, 2021): 190–202. https://doi.org/10.1016/j.tcs.2021.09.021.
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    • Carley, Lauren N., Renuka Panchagavi, Xin Song, Sade Davenport, Christina M. Bergemann, Alexander W. McCumber, Claudia K. Gunsch, and Marie Simonin. “Long-Term Effects of Copper Nanopesticides on Soil and Sediment Community Diversity in Two Outdoor Mesocosm Experiments.” Environmental Science & Technology 54, no. 14 (July 2020): 8878–89. https://doi.org/10.1021/acs.est.0c00510.
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    • Song, X., D. Fu, S. Shah, and J. Reif. “UV-Micropatterned Miniaturization: Rapid In Situ Photopatterning and Miniaturization of Microscale Features on Shrinkable Thermoplastics.” Advanced Materials Technologies 5, no. 6 (June 1, 2020). https://doi.org/10.1002/admt.202000146.
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    • Song, Xin, and John Reif. “Nucleic Acid Databases and Molecular-Scale Computing.” Acs Nano 13, no. 6 (June 2019): 6256–68. https://doi.org/10.1021/acsnano.9b02562.
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    • Song, X., A. Eshra, C. Dwyer, and J. Reif. “Renewable DNA seesaw logic circuits enabled by photoregulation of toehold-mediated strand displacement.” Rsc Advances 7, no. 45 (January 1, 2017): 28130–44. https://doi.org/10.1039/c7ra02607b.
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  • Book Sections

    • Song, Xin, Shalin Shah, and John Reif. “An Overview of DNA‐Based Digital Data Storage.” In DNA- and RNA-Based Computing Systems, edited by Evgeny Katz, 345–52. John Wiley & Sons, 2021.
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    • Song, Xin, and John Reif. “Optics-Free Imaging with DNA Microscopy: An Overview.” In Handbook of Unconventional Computing, edited by Andrew Adamatzky, Volume 2: Implementations:181–91. World Scientific, 2021. https://doi.org/10.1142/9789811235740_0006.
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  • Conference Papers

    • Shah, S., T. Song, X. Song, M. Yang, and J. Reif. “Implementing Arbitrary CRNs Using Strand Displacing Polymerase.” In Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 11648 LNCS:21–36, 2019. https://doi.org/10.1007/978-3-030-26807-7_2.
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