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Selected Publications


Genome‐wide association studies for egg quality traits in White Leghorn layers using low‐pass sequencing and chip data

Journal Article Journal of Animal Breeding and Genetics · July 2022 AbstractLow‐pass sequencing data have been proposed as an alternative to single nucleotide polymorphism (SNP) chips in genome‐wide association studies (GWAS) of several species. However, it has not been used in layer chicke ... Full text Cite

Tests of association based on genomic windows can lead to spurious associations when using genotype panels with heterogeneous SNP densities

Journal Article Genetics Selection Evolution · December 2021 AbstractDense single nucleotide polymorphism (SNP) panels are widely used for genome-wide association studies (GWAS). In these panels, SNPs within a genomic segment tend to be highly correlated. Thus, association studies ba ... Full text Cite

Single-Trait and Multiple-Trait Genomic Prediction From Multi-Class Bayesian Alphabet Models Using Biological Information

Journal Article Frontiers in Genetics · October 11, 2021 Genomic prediction has been widely used in multiple areas and various genomic prediction methods have been developed. The majority of these methods, however, focus on statistical properties and ignore the abundant useful biological information like ... Full text Cite

A Multiple-Trait Bayesian Variable Selection Regression Method for Integrating Phenotypic Causal Networks in Genome-Wide Association Studies

Journal Article G3 Genes|Genomes|Genetics · December 1, 2020 AbstractBayesian regression methods that incorporate different mixture priors for marker effects are used in multi-trait genomic prediction. These methods can also be extended to genome-wide association stud ... Full text Cite

Pilot study: Application of artificial intelligence for detecting left atrial enlargement on canine thoracic radiographs

Journal Article Veterinary Radiology & Ultrasound · November 2020 AbstractAlthough deep learning has been explored extensively for computer‐aided medical imaging diagnosis in human medicine, very little has been done in veterinary medicine. The goal of this retrospective, pilot project wa ... Full text Cite