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RNA-Seq and ChIP-Seq reveal SQSTM1/p62 as a key mediator of JunB suppression of NF-κB-dependent inflammation.

Publication ,  Journal Article
Zhang, X; Jin, JY; Wu, J; Qin, X; Streilein, R; Hall, RP; Zhang, JY
Published in: J Invest Dermatol
April 2015

Mice with epidermal deletion of JunB transcription factor displayed a psoriasis-like inflammation. The relevance of these findings to humans and the mechanisms mediating JunB function are not fully understood. Here we demonstrate that impaired JunB function via gene silencing or overexpression of a dominant negative mutant increased human keratinocyte cell proliferation but decreased cell barrier function. RNA-seq revealed over 500 genes affected by JunB loss of function, which included the upregulation of an array of proinflammatory molecules relevant to psoriasis. Among these were tumor necrosis factor α (TNFα), CCL2, CXCL10, IL6R, and SQSTM1, an adaptor protein involved in nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB) activation. Chromatin immunoprecipitation (ChIP)-Seq and gene reporter analyses showed that JunB directly suppressed SQSTM1 by binding to a consensus AP-1 cis element located around 2 kb upstream of SQSTM1-transcription start site. Similar to JunB loss of function, SQSTM1-overexpression induced TNFα, CCL2, and CXCL10. Conversely, NF-κB inhibition genetically with a mutant IκBα or pharmacologically with pyrrolidine dithiocarbamate (PDTC) prevented cytokine, but not IL6R, induction by JunB deficiency. Taken together, our findings indicate that JunB controls epidermal growth, barrier formation, and proinflammatory responses through direct and indirect mechanisms, pinpointing SQSTM1 as a key mediator of JunB suppression of NF-κB-dependent inflammation.

Duke Scholars

Published In

J Invest Dermatol

DOI

EISSN

1523-1747

Publication Date

April 2015

Volume

135

Issue

4

Start / End Page

1016 / 1024

Location

United States

Related Subject Headings

  • Transcription Factors
  • Thiocarbamates
  • Skin Physiological Phenomena
  • Sequestosome-1 Protein
  • Sequence Analysis, RNA
  • Regeneration
  • Pyrrolidines
  • Oligonucleotide Array Sequence Analysis
  • NF-kappa B
  • Mutation
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Zhang, X., Jin, J. Y., Wu, J., Qin, X., Streilein, R., Hall, R. P., & Zhang, J. Y. (2015). RNA-Seq and ChIP-Seq reveal SQSTM1/p62 as a key mediator of JunB suppression of NF-κB-dependent inflammation. J Invest Dermatol, 135(4), 1016–1024. https://doi.org/10.1038/jid.2014.519
Zhang, Xiaoling, Jane Y. Jin, Joseph Wu, Xiaoxia Qin, Robert Streilein, Russell P. Hall, and Jennifer Y. Zhang. “RNA-Seq and ChIP-Seq reveal SQSTM1/p62 as a key mediator of JunB suppression of NF-κB-dependent inflammation.J Invest Dermatol 135, no. 4 (April 2015): 1016–24. https://doi.org/10.1038/jid.2014.519.
Zhang X, Jin JY, Wu J, Qin X, Streilein R, Hall RP, et al. RNA-Seq and ChIP-Seq reveal SQSTM1/p62 as a key mediator of JunB suppression of NF-κB-dependent inflammation. J Invest Dermatol. 2015 Apr;135(4):1016–24.
Zhang, Xiaoling, et al. “RNA-Seq and ChIP-Seq reveal SQSTM1/p62 as a key mediator of JunB suppression of NF-κB-dependent inflammation.J Invest Dermatol, vol. 135, no. 4, Apr. 2015, pp. 1016–24. Pubmed, doi:10.1038/jid.2014.519.
Zhang X, Jin JY, Wu J, Qin X, Streilein R, Hall RP, Zhang JY. RNA-Seq and ChIP-Seq reveal SQSTM1/p62 as a key mediator of JunB suppression of NF-κB-dependent inflammation. J Invest Dermatol. 2015 Apr;135(4):1016–1024.
Journal cover image

Published In

J Invest Dermatol

DOI

EISSN

1523-1747

Publication Date

April 2015

Volume

135

Issue

4

Start / End Page

1016 / 1024

Location

United States

Related Subject Headings

  • Transcription Factors
  • Thiocarbamates
  • Skin Physiological Phenomena
  • Sequestosome-1 Protein
  • Sequence Analysis, RNA
  • Regeneration
  • Pyrrolidines
  • Oligonucleotide Array Sequence Analysis
  • NF-kappa B
  • Mutation