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The miR-184 binding-site rs8126 T>C polymorphism in TNFAIP2 is associated with risk of gastric cancer.

Publication ,  Journal Article
Xu, Y; Ma, H; Yu, H; Liu, Z; Wang, L-E; Tan, D; Muddasani, R; Lu, V; Ajani, JA; Wang, Y; Wei, Q
Published in: PLoS One
2013

BACKGROUND: TNFAIP2 is a crucial gene involved in apoptosis. Single nucleotide polymorphisms (SNPs) in its miRNA binding sites could modulate functions of the miRNA-target genes and thus risk of cancers. In this study, we investigated associations between potentially functional SNPs in the miRNA binding sites of the 3'UTR of TNFAIP2 and gastric cancer risk in a US population. METHODS: We conducted a case-control study of 301 gastric cancer patients and 313 cancer-free controls frequency-matched by age, sex and ethnicity. We genotyped four selected TNFAIP2 SNPs (rs8126 T>C, rs710100 G>A, rs1052912 G>A and rs1052823 G>T) and used the logistic regression analysis to assess associations of these SNPs with cancer risk. RESULTS: The rs8126 CC genotype was associated with a significantly elevated risk of gastric cancer (adjusted OR = 2.00, 95% CI = 1.09-3.64 and P = 0.024), compared with the combined rs8126 TT+TC genotypes, particularly in current drinkers. However, none of other TNFAIP2 SNPs was associated with risk of gastric cancer. CONCLUSIONS: Our data suggested that the TNFAIP2 miRNA binding site rs8126 T>C SNP may be a marker for susceptibility to gastric cancer, and this finding requires further validation by larger studies.

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Published In

PLoS One

DOI

EISSN

1932-6203

Publication Date

2013

Volume

8

Issue

5

Start / End Page

e64973

Location

United States

Related Subject Headings

  • Stomach Neoplasms
  • Risk Factors
  • Polymorphism, Single Nucleotide
  • Middle Aged
  • MicroRNAs
  • Male
  • Logistic Models
  • Humans
  • Haplotypes
  • Genetic Predisposition to Disease
 

Citation

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Xu, Y., Ma, H., Yu, H., Liu, Z., Wang, L.-E., Tan, D., … Wei, Q. (2013). The miR-184 binding-site rs8126 T>C polymorphism in TNFAIP2 is associated with risk of gastric cancer. PLoS One, 8(5), e64973. https://doi.org/10.1371/journal.pone.0064973
Xu, Yu, Hongxia Ma, Hongping Yu, Zhensheng Liu, Li-E Wang, Dongfeng Tan, Ramya Muddasani, et al. “The miR-184 binding-site rs8126 T>C polymorphism in TNFAIP2 is associated with risk of gastric cancer.PLoS One 8, no. 5 (2013): e64973. https://doi.org/10.1371/journal.pone.0064973.
Xu Y, Ma H, Yu H, Liu Z, Wang L-E, Tan D, et al. The miR-184 binding-site rs8126 T>C polymorphism in TNFAIP2 is associated with risk of gastric cancer. PLoS One. 2013;8(5):e64973.
Xu, Yu, et al. “The miR-184 binding-site rs8126 T>C polymorphism in TNFAIP2 is associated with risk of gastric cancer.PLoS One, vol. 8, no. 5, 2013, p. e64973. Pubmed, doi:10.1371/journal.pone.0064973.
Xu Y, Ma H, Yu H, Liu Z, Wang L-E, Tan D, Muddasani R, Lu V, Ajani JA, Wang Y, Wei Q. The miR-184 binding-site rs8126 T>C polymorphism in TNFAIP2 is associated with risk of gastric cancer. PLoS One. 2013;8(5):e64973.

Published In

PLoS One

DOI

EISSN

1932-6203

Publication Date

2013

Volume

8

Issue

5

Start / End Page

e64973

Location

United States

Related Subject Headings

  • Stomach Neoplasms
  • Risk Factors
  • Polymorphism, Single Nucleotide
  • Middle Aged
  • MicroRNAs
  • Male
  • Logistic Models
  • Humans
  • Haplotypes
  • Genetic Predisposition to Disease