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Alu Insertion Polymorphisms as Evidence for Population Structure in Baboons.

Publication ,  Journal Article
Steely, CJ; Walker, JA; Jordan, VE; Beckstrom, TO; McDaniel, CL; St Romain, CP; Bennett, EC; Robichaux, A; Clement, BN; Raveendran, M ...
Published in: Genome biology and evolution
September 2017

Male dispersal from the natal group at or near maturity is a feature of most baboon (Papio) species. It potentially has profound effects upon population structure and evolutionary processes, but dispersal, especially for unusually long distances, is not readily documented by direct field observation. In this pilot study, we investigate the possibility of retrieving baboon population structure in yellow (Papio cynocephalus) and kinda (Papio kindae) baboons from the distribution of variation in a genome-wide set of 494 Alu insertion polymorphisms, made available via the recently completed Baboon Genome Analysis Consortium. Alu insertion variation in a mixed population derived from yellow and olive (Papio anubis) baboons identified each individual's proportion of heritage from either parental species. In an unmixed yellow baboon population, our analysis showed greater similarity between neighboring than between more distantly situated groups, suggesting structuring of the population by male dispersal distance. Finally (and very provisionally), an unexpectedly sharp difference in Alu insertion frequencies between members of neighboring social groups of kinda baboons suggests that intergroup migration may be more rare than predicted in this little known species.

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Published In

Genome biology and evolution

DOI

EISSN

1759-6653

ISSN

1759-6653

Publication Date

September 2017

Volume

9

Issue

9

Start / End Page

2418 / 2427

Related Subject Headings

  • Polymorphism, Genetic
  • Phylogeny
  • Papio
  • Male
  • Genome
  • Female
  • Evolution, Molecular
  • Developmental Biology
  • Animals
  • Alu Elements
 

Citation

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Steely, C. J., Walker, J. A., Jordan, V. E., Beckstrom, T. O., McDaniel, C. L., St Romain, C. P., … Batzer, M. A. (2017). Alu Insertion Polymorphisms as Evidence for Population Structure in Baboons. Genome Biology and Evolution, 9(9), 2418–2427. https://doi.org/10.1093/gbe/evx184
Steely, Cody J., Jerilyn A. Walker, Vallmer E. Jordan, Thomas O. Beckstrom, Cullen L. McDaniel, Corey P. St Romain, Emily C. Bennett, et al. “Alu Insertion Polymorphisms as Evidence for Population Structure in Baboons.Genome Biology and Evolution 9, no. 9 (September 2017): 2418–27. https://doi.org/10.1093/gbe/evx184.
Steely CJ, Walker JA, Jordan VE, Beckstrom TO, McDaniel CL, St Romain CP, et al. Alu Insertion Polymorphisms as Evidence for Population Structure in Baboons. Genome biology and evolution. 2017 Sep;9(9):2418–27.
Steely, Cody J., et al. “Alu Insertion Polymorphisms as Evidence for Population Structure in Baboons.Genome Biology and Evolution, vol. 9, no. 9, Sept. 2017, pp. 2418–27. Epmc, doi:10.1093/gbe/evx184.
Steely CJ, Walker JA, Jordan VE, Beckstrom TO, McDaniel CL, St Romain CP, Bennett EC, Robichaux A, Clement BN, Raveendran M, Baboon Genome Analysis Consortium, Worley KC, Phillips-Conroy J, Jolly CJ, Rogers J, Konkel MK, Batzer MA. Alu Insertion Polymorphisms as Evidence for Population Structure in Baboons. Genome biology and evolution. 2017 Sep;9(9):2418–2427.
Journal cover image

Published In

Genome biology and evolution

DOI

EISSN

1759-6653

ISSN

1759-6653

Publication Date

September 2017

Volume

9

Issue

9

Start / End Page

2418 / 2427

Related Subject Headings

  • Polymorphism, Genetic
  • Phylogeny
  • Papio
  • Male
  • Genome
  • Female
  • Evolution, Molecular
  • Developmental Biology
  • Animals
  • Alu Elements