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Deep convolutional neural network applied to the liver imaging reporting and data system (LI-RADS) version 2014 category classification: a pilot study.

Publication ,  Journal Article
Yamashita, R; Mittendorf, A; Zhu, Z; Fowler, KJ; Santillan, CS; Sirlin, CB; Bashir, MR; Do, RKG
Published in: Abdom Radiol (NY)
January 2020

PURPOSE: To develop a deep convolutional neural network (CNN) model to categorize multiphase CT and MRI liver observations using the liver imaging reporting and data system (LI-RADS) (version 2014). METHODS: A pre-existing dataset comprising 314 hepatic observations (163 CT, 151 MRI) with corresponding diameters and LI-RADS categories (LR-1-5) assigned in consensus by two LI-RADS steering committee members was used to develop two CNNs: pre-trained network with an input of triple-phase images (training with transfer learning) and custom-made network with an input of quadruple-phase images (training from scratch). The dataset was randomly split into training, validation, and internal test sets (70:15:15 split). The overall accuracy and area under receiver operating characteristic curve (AUROC) were assessed for categorizing LR-1/2, LR-3, LR-4, and LR-5. External validation was performed for the model with the better performance on the internal test set using two external datasets (EXT-CT and EXT-MR: 68 and 44 observations, respectively). RESULTS: The transfer learning model outperformed the custom-made model: overall accuracy of 60.4% and AUROCs of 0.85, 0.90, 0.63, 0.82 for LR-1/2, LR-3, LR-4, LR-5, respectively. On EXT-CT, the model had an overall accuracy of 41.2% and AUROCs of 0.70, 0.66, 0.60, 0.76 for LR-1/2, LR-3, LR-4, LR-5, respectively. On EXT-MR, the model had an overall accuracy of 47.7% and AUROCs of 0.88, 0.74, 0.69, 0.79 for LR-1/2, LR-3, LR-4, LR-5, respectively. CONCLUSION: Our study shows the feasibility of CNN for assigning LI-RADS categories from a relatively small dataset but highlights the challenges of model development and validation.

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Published In

Abdom Radiol (NY)

DOI

EISSN

2366-0058

Publication Date

January 2020

Volume

45

Issue

1

Start / End Page

24 / 35

Location

United States

Related Subject Headings

  • Tomography, X-Ray Computed
  • Reproducibility of Results
  • Radiology Information Systems
  • Pilot Projects
  • Neural Networks, Computer
  • Magnetic Resonance Imaging
  • Liver Diseases
  • Liver
  • Image Interpretation, Computer-Assisted
  • Humans
 

Citation

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Yamashita, R., Mittendorf, A., Zhu, Z., Fowler, K. J., Santillan, C. S., Sirlin, C. B., … Do, R. K. G. (2020). Deep convolutional neural network applied to the liver imaging reporting and data system (LI-RADS) version 2014 category classification: a pilot study. Abdom Radiol (NY), 45(1), 24–35. https://doi.org/10.1007/s00261-019-02306-7
Yamashita, Rikiya, Amber Mittendorf, Zhe Zhu, Kathryn J. Fowler, Cynthia S. Santillan, Claude B. Sirlin, Mustafa R. Bashir, and Richard K. G. Do. “Deep convolutional neural network applied to the liver imaging reporting and data system (LI-RADS) version 2014 category classification: a pilot study.Abdom Radiol (NY) 45, no. 1 (January 2020): 24–35. https://doi.org/10.1007/s00261-019-02306-7.
Yamashita R, Mittendorf A, Zhu Z, Fowler KJ, Santillan CS, Sirlin CB, et al. Deep convolutional neural network applied to the liver imaging reporting and data system (LI-RADS) version 2014 category classification: a pilot study. Abdom Radiol (NY). 2020 Jan;45(1):24–35.
Yamashita, Rikiya, et al. “Deep convolutional neural network applied to the liver imaging reporting and data system (LI-RADS) version 2014 category classification: a pilot study.Abdom Radiol (NY), vol. 45, no. 1, Jan. 2020, pp. 24–35. Pubmed, doi:10.1007/s00261-019-02306-7.
Yamashita R, Mittendorf A, Zhu Z, Fowler KJ, Santillan CS, Sirlin CB, Bashir MR, Do RKG. Deep convolutional neural network applied to the liver imaging reporting and data system (LI-RADS) version 2014 category classification: a pilot study. Abdom Radiol (NY). 2020 Jan;45(1):24–35.
Journal cover image

Published In

Abdom Radiol (NY)

DOI

EISSN

2366-0058

Publication Date

January 2020

Volume

45

Issue

1

Start / End Page

24 / 35

Location

United States

Related Subject Headings

  • Tomography, X-Ray Computed
  • Reproducibility of Results
  • Radiology Information Systems
  • Pilot Projects
  • Neural Networks, Computer
  • Magnetic Resonance Imaging
  • Liver Diseases
  • Liver
  • Image Interpretation, Computer-Assisted
  • Humans