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Beyond 2/3 and 1/3: The Complex Signatures of Sex-Biased Admixture on the X Chromosome.

Publication ,  Journal Article
Goldberg, A; Rosenberg, NA
Published in: Genetics
September 2015

Sex-biased demography, in which parameters governing migration and population size differ between females and males, has been studied through comparisons of X chromosomes, which are inherited sex-specifically, and autosomes, which are not. A common form of sex bias in humans is sex-biased admixture, in which at least one of the source populations differs in its proportions of females and males contributing to an admixed population. Studies of sex-biased admixture often examine the mean ancestry for markers on the X chromosome in relation to the autosomes. A simple framework noting that in a population with equally many females and males, two-thirds of X chromosomes appear in females, suggests that the mean X-chromosomal admixture fraction is a linear combination of female and male admixture parameters, with coefficients 2/3 and 1/3, respectively. Extending a mechanistic admixture model to accommodate the X chromosome, we demonstrate that this prediction is not generally true in admixture models, although it holds in the limit for an admixture process occurring as a single event. For a model with constant ongoing admixture, we determine the mean X-chromosomal admixture, comparing admixture on female and male X chromosomes to corresponding autosomal values. Surprisingly, in reanalyzing African-American genetic data to estimate sex-specific contributions from African and European sources, we find that the range of contributions compatible with the excess African ancestry on the X chromosome compared to autosomes has a wide spread, permitting scenarios either without male-biased contributions from Europe or without female-biased contributions from Africa.

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Published In

Genetics

DOI

EISSN

1943-2631

ISSN

0016-6731

Publication Date

September 2015

Volume

201

Issue

1

Start / End Page

263 / 279

Related Subject Headings

  • Sex Factors
  • Population Density
  • Models, Genetic
  • Male
  • Humans
  • Human Migration
  • Female
  • Developmental Biology
  • Chromosomes, Human, X
  • Black or African American
 

Citation

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Goldberg, A., & Rosenberg, N. A. (2015). Beyond 2/3 and 1/3: The Complex Signatures of Sex-Biased Admixture on the X Chromosome. Genetics, 201(1), 263–279. https://doi.org/10.1534/genetics.115.178509
Goldberg, Amy, and Noah A. Rosenberg. “Beyond 2/3 and 1/3: The Complex Signatures of Sex-Biased Admixture on the X Chromosome.Genetics 201, no. 1 (September 2015): 263–79. https://doi.org/10.1534/genetics.115.178509.
Goldberg A, Rosenberg NA. Beyond 2/3 and 1/3: The Complex Signatures of Sex-Biased Admixture on the X Chromosome. Genetics. 2015 Sep;201(1):263–79.
Goldberg, Amy, and Noah A. Rosenberg. “Beyond 2/3 and 1/3: The Complex Signatures of Sex-Biased Admixture on the X Chromosome.Genetics, vol. 201, no. 1, Sept. 2015, pp. 263–79. Epmc, doi:10.1534/genetics.115.178509.
Goldberg A, Rosenberg NA. Beyond 2/3 and 1/3: The Complex Signatures of Sex-Biased Admixture on the X Chromosome. Genetics. 2015 Sep;201(1):263–279.

Published In

Genetics

DOI

EISSN

1943-2631

ISSN

0016-6731

Publication Date

September 2015

Volume

201

Issue

1

Start / End Page

263 / 279

Related Subject Headings

  • Sex Factors
  • Population Density
  • Models, Genetic
  • Male
  • Humans
  • Human Migration
  • Female
  • Developmental Biology
  • Chromosomes, Human, X
  • Black or African American