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A statistical pipeline for identifying physical features that differentiate classes of 3D shapes

Publication ,  Journal Article
Wang, B; Sudijono, T; Kirveslahti, H; Gao, T; Boyer, DM; Mukherjee, S; Crawford, L
Published in: Annals of Applied Statistics
June 1, 2021

The recent curation of large-scale databases with 3D surface scans of shapes has motivated the development of tools that better detect global patterns in morphological variation. Studies, which focus on identifying differences between shapes, have been limited to simple pairwise comparisons and rely on prespecified landmarks (that are often known). We present SINATRA, the first statistical pipeline for analyzing collections of shapes without requiring any correspondences. Our novel algorithm takes in two classes of shapes and highlights the physical features that best describe the variation between them.We use a rigorous simulation framework to assess our approach. Lastly, as a case study we use SINATRA to analyze mandibular molars from four different suborders of primates and demonstrate its ability recover known morphometric variation across phylogenies.

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Published In

Annals of Applied Statistics

DOI

EISSN

1941-7330

ISSN

1932-6157

Publication Date

June 1, 2021

Volume

15

Issue

2

Start / End Page

638 / 661

Related Subject Headings

  • Statistics & Probability
  • 4905 Statistics
  • 1403 Econometrics
  • 0104 Statistics
 

Citation

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Wang, B., Sudijono, T., Kirveslahti, H., Gao, T., Boyer, D. M., Mukherjee, S., & Crawford, L. (2021). A statistical pipeline for identifying physical features that differentiate classes of 3D shapes. Annals of Applied Statistics, 15(2), 638–661. https://doi.org/10.1214/20-AOAS1430
Wang, B., T. Sudijono, H. Kirveslahti, T. Gao, D. M. Boyer, S. Mukherjee, and L. Crawford. “A statistical pipeline for identifying physical features that differentiate classes of 3D shapes.” Annals of Applied Statistics 15, no. 2 (June 1, 2021): 638–61. https://doi.org/10.1214/20-AOAS1430.
Wang B, Sudijono T, Kirveslahti H, Gao T, Boyer DM, Mukherjee S, et al. A statistical pipeline for identifying physical features that differentiate classes of 3D shapes. Annals of Applied Statistics. 2021 Jun 1;15(2):638–61.
Wang, B., et al. “A statistical pipeline for identifying physical features that differentiate classes of 3D shapes.” Annals of Applied Statistics, vol. 15, no. 2, June 2021, pp. 638–61. Scopus, doi:10.1214/20-AOAS1430.
Wang B, Sudijono T, Kirveslahti H, Gao T, Boyer DM, Mukherjee S, Crawford L. A statistical pipeline for identifying physical features that differentiate classes of 3D shapes. Annals of Applied Statistics. 2021 Jun 1;15(2):638–661.

Published In

Annals of Applied Statistics

DOI

EISSN

1941-7330

ISSN

1932-6157

Publication Date

June 1, 2021

Volume

15

Issue

2

Start / End Page

638 / 661

Related Subject Headings

  • Statistics & Probability
  • 4905 Statistics
  • 1403 Econometrics
  • 0104 Statistics