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The shared genetic architecture between epidemiological and behavioral traits with lung cancer.

Publication ,  Journal Article
Pettit, RW; Byun, J; Han, Y; Ostrom, QT; Edelson, J; Walsh, KM; Bondy, ML; Hung, RJ; McKay, JD; Amos, CI
Published in: Sci Rep
September 2, 2021

The complex polygenic nature of lung cancer is not fully characterized. Our study seeks to identify novel phenotypes associated with lung cancer using cross-trait linkage disequilibrium score regression (LDSR). We measured pairwise genetic correlation (rg) and SNP heritability (h2) between 347 traits and lung cancer risk using genome-wide association study summary statistics from the UKBB and OncoArray consortium. Further, we conducted analysis after removing genomic regions previously associated with smoking behaviors to mitigate potential confounding effects. We found significant negative genetic correlations between lung cancer risk and dietary behaviors, fitness metrics, educational attainment, and other psychosocial traits. Alcohol taken with meals (rg = - 0.41, h2 = 0.10, p = 1.33 × 10-16), increased fluid intelligence scores (rg = - 0.25, h2 = 0.22, p = 4.54 × 10-8), and the age at which full time education was completed (rg = - 0.45, h2 = 0.11, p = 1.24 × 10-20) demonstrated negative genetic correlation with lung cancer susceptibility. The body mass index was positively correlated with lung cancer risk (rg = 0.20, h2 = 0.25, p = 2.61 × 10-9). This analysis reveals shared genetic architecture between several traits and lung cancer predisposition. Future work should test for causal relationships and investigate common underlying genetic mechanisms across these genetically correlated traits.

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Published In

Sci Rep

DOI

EISSN

2045-2322

Publication Date

September 2, 2021

Volume

11

Issue

1

Start / End Page

17559

Location

England

Related Subject Headings

  • United Kingdom
  • Polymorphism, Single Nucleotide
  • Phenotype
  • Multifactorial Inheritance
  • Lung Neoplasms
  • Linkage Disequilibrium
  • International Agencies
  • Humans
  • Genome-Wide Association Study
  • Genetic Predisposition to Disease
 

Citation

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Pettit, R. W., Byun, J., Han, Y., Ostrom, Q. T., Edelson, J., Walsh, K. M., … Amos, C. I. (2021). The shared genetic architecture between epidemiological and behavioral traits with lung cancer. Sci Rep, 11(1), 17559. https://doi.org/10.1038/s41598-021-96685-x
Pettit, Rowland W., Jinyoung Byun, Younghun Han, Quinn T. Ostrom, Jacob Edelson, Kyle M. Walsh, Melissa L. Bondy, Rayjean J. Hung, James D. McKay, and Christopher I. Amos. “The shared genetic architecture between epidemiological and behavioral traits with lung cancer.Sci Rep 11, no. 1 (September 2, 2021): 17559. https://doi.org/10.1038/s41598-021-96685-x.
Pettit RW, Byun J, Han Y, Ostrom QT, Edelson J, Walsh KM, et al. The shared genetic architecture between epidemiological and behavioral traits with lung cancer. Sci Rep. 2021 Sep 2;11(1):17559.
Pettit, Rowland W., et al. “The shared genetic architecture between epidemiological and behavioral traits with lung cancer.Sci Rep, vol. 11, no. 1, Sept. 2021, p. 17559. Pubmed, doi:10.1038/s41598-021-96685-x.
Pettit RW, Byun J, Han Y, Ostrom QT, Edelson J, Walsh KM, Bondy ML, Hung RJ, McKay JD, Amos CI. The shared genetic architecture between epidemiological and behavioral traits with lung cancer. Sci Rep. 2021 Sep 2;11(1):17559.

Published In

Sci Rep

DOI

EISSN

2045-2322

Publication Date

September 2, 2021

Volume

11

Issue

1

Start / End Page

17559

Location

England

Related Subject Headings

  • United Kingdom
  • Polymorphism, Single Nucleotide
  • Phenotype
  • Multifactorial Inheritance
  • Lung Neoplasms
  • Linkage Disequilibrium
  • International Agencies
  • Humans
  • Genome-Wide Association Study
  • Genetic Predisposition to Disease