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Human genetic admixture through the lens of population genomics.

Publication ,  Journal Article
Gopalan, S; Smith, SP; Korunes, K; Hamid, I; Ramachandran, S; Goldberg, A
Published in: Philosophical transactions of the Royal Society of London. Series B, Biological sciences
June 2022

Over the past 50 years, geneticists have made great strides in understanding how our species' evolutionary history gave rise to current patterns of human genetic diversity classically summarized by Lewontin in his 1972 paper, 'The Apportionment of Human Diversity'. One evolutionary process that requires special attention in both population genetics and statistical genetics is admixture: gene flow between two or more previously separated source populations to form a new admixed population. The admixture process introduces ancestry-based structure into patterns of genetic variation within and between populations, which in turn influences the inference of demographic histories, identification of genetic targets of selection and prediction of complex traits. In this review, we outline some challenges for admixture population genetics, including limitations of applying methods designed for populations without recent admixture to the study of admixed populations. We highlight recent studies and methodological advances that aim to overcome such challenges, leveraging genomic signatures of admixture that occurred in the past tens of generations to gain insights into human history, natural selection and complex trait architecture. This article is part of the theme issue 'Celebrating 50 years since Lewontin's apportionment of human diversity'.

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Published In

Philosophical transactions of the Royal Society of London. Series B, Biological sciences

DOI

EISSN

1471-2970

ISSN

0962-8436

Publication Date

June 2022

Volume

377

Issue

1852

Start / End Page

20200410

Related Subject Headings

  • Selection, Genetic
  • Metagenomics
  • Humans
  • Human Genetics
  • Genetics, Population
  • Genetic Variation
  • Gene Flow
  • Evolutionary Biology
  • 32 Biomedical and clinical sciences
  • 31 Biological sciences
 

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Gopalan, S., Smith, S. P., Korunes, K., Hamid, I., Ramachandran, S., & Goldberg, A. (2022). Human genetic admixture through the lens of population genomics. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, 377(1852), 20200410. https://doi.org/10.1098/rstb.2020.0410
Gopalan, Shyamalika, Samuel Pattillo Smith, Katharine Korunes, Iman Hamid, Sohini Ramachandran, and Amy Goldberg. “Human genetic admixture through the lens of population genomics.Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences 377, no. 1852 (June 2022): 20200410. https://doi.org/10.1098/rstb.2020.0410.
Gopalan S, Smith SP, Korunes K, Hamid I, Ramachandran S, Goldberg A. Human genetic admixture through the lens of population genomics. Philosophical transactions of the Royal Society of London Series B, Biological sciences. 2022 Jun;377(1852):20200410.
Gopalan, Shyamalika, et al. “Human genetic admixture through the lens of population genomics.Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, vol. 377, no. 1852, June 2022, p. 20200410. Epmc, doi:10.1098/rstb.2020.0410.
Gopalan S, Smith SP, Korunes K, Hamid I, Ramachandran S, Goldberg A. Human genetic admixture through the lens of population genomics. Philosophical transactions of the Royal Society of London Series B, Biological sciences. 2022 Jun;377(1852):20200410.
Journal cover image

Published In

Philosophical transactions of the Royal Society of London. Series B, Biological sciences

DOI

EISSN

1471-2970

ISSN

0962-8436

Publication Date

June 2022

Volume

377

Issue

1852

Start / End Page

20200410

Related Subject Headings

  • Selection, Genetic
  • Metagenomics
  • Humans
  • Human Genetics
  • Genetics, Population
  • Genetic Variation
  • Gene Flow
  • Evolutionary Biology
  • 32 Biomedical and clinical sciences
  • 31 Biological sciences