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SurvMaximin: Robust federated approach to transporting survival risk prediction models

Publication ,  Journal Article
Wang, X; Zhang, HG; Xiong, X; Hong, C; Weber, GM; Brat, GA; Bonzel, CL; Luo, Y; Duan, R; Palmer, NP; Hutch, MR; Gutiérrez-Sacristán, A ...
Published in: Journal of Biomedical Informatics
October 1, 2022

Objective: For multi-center heterogeneous Real-World Data (RWD) with time-to-event outcomes and high-dimensional features, we propose the SurvMaximin algorithm to estimate Cox model feature coefficients for a target population by borrowing summary information from a set of health care centers without sharing patient-level information. Materials and Methods: For each of the centers from which we want to borrow information to improve the prediction performance for the target population, a penalized Cox model is fitted to estimate feature coefficients for the center. Using estimated feature coefficients and the covariance matrix of the target population, we then obtain a SurvMaximin estimated set of feature coefficients for the target population. The target population can be an entire cohort comprised of all centers, corresponding to federated learning, or a single center, corresponding to transfer learning. Results: Simulation studies and a real-world international electronic health records application study, with 15 participating health care centers across three countries (France, Germany, and the U.S.), show that the proposed SurvMaximin algorithm achieves comparable or higher accuracy compared with the estimator using only the information of the target site and other existing methods. The SurvMaximin estimator is robust to variations in sample sizes and estimated feature coefficients between centers, which amounts to significantly improved estimates for target sites with fewer observations. Conclusions: The SurvMaximin method is well suited for both federated and transfer learning in the high-dimensional survival analysis setting. SurvMaximin only requires a one-time summary information exchange from participating centers. Estimated regression vectors can be very heterogeneous. SurvMaximin provides robust Cox feature coefficient estimates without outcome information in the target population and is privacy-preserving.

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Published In

Journal of Biomedical Informatics

DOI

ISSN

1532-0464

Publication Date

October 1, 2022

Volume

134

Related Subject Headings

  • Medical Informatics
  • Biomedical Engineering
  • 4601 Applied computing
  • 4203 Health services and systems
  • 11 Medical and Health Sciences
  • 08 Information and Computing Sciences
  • 06 Biological Sciences
 

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Wang, X., Zhang, H. G., Xiong, X., Hong, C., Weber, G. M., Brat, G. A., … Cai, T. (2022). SurvMaximin: Robust federated approach to transporting survival risk prediction models. Journal of Biomedical Informatics, 134. https://doi.org/10.1016/j.jbi.2022.104176
Wang, X., H. G. Zhang, X. Xiong, C. Hong, G. M. Weber, G. A. Brat, C. L. Bonzel, et al. “SurvMaximin: Robust federated approach to transporting survival risk prediction models.” Journal of Biomedical Informatics 134 (October 1, 2022). https://doi.org/10.1016/j.jbi.2022.104176.
Wang X, Zhang HG, Xiong X, Hong C, Weber GM, Brat GA, et al. SurvMaximin: Robust federated approach to transporting survival risk prediction models. Journal of Biomedical Informatics. 2022 Oct 1;134.
Wang, X., et al. “SurvMaximin: Robust federated approach to transporting survival risk prediction models.” Journal of Biomedical Informatics, vol. 134, Oct. 2022. Scopus, doi:10.1016/j.jbi.2022.104176.
Wang X, Zhang HG, Xiong X, Hong C, Weber GM, Brat GA, Bonzel CL, Luo Y, Duan R, Palmer NP, Hutch MR, Gutiérrez-Sacristán A, Bellazzi R, Chiovato L, Cho K, Dagliati A, Estiri H, García-Barrio N, Griffier R, Hanauer DA, Ho YL, Holmes JH, Keller MS, Klann MEng JG, L’Yi S, Lozano-Zahonero S, Maidlow SE, Makoudjou A, Malovini A, Moal B, Moore JH, Morris M, Mowery DL, Murphy SN, Neuraz A, Yuan Ngiam K, Omenn GS, Patel LP, Pedrera-Jiménez M, Prunotto A, Jebathilagam Samayamuthu M, Sanz Vidorreta FJ, Schriver ER, Schubert P, Serrano-Balazote P, South AM, Tan ALM, Tan BWL, Tibollo V, Tippmann P, Visweswaran S, Xia Z, Yuan W, Zöller D, Kohane IS, Avillach P, Guo Z, Cai T. SurvMaximin: Robust federated approach to transporting survival risk prediction models. Journal of Biomedical Informatics. 2022 Oct 1;134.
Journal cover image

Published In

Journal of Biomedical Informatics

DOI

ISSN

1532-0464

Publication Date

October 1, 2022

Volume

134

Related Subject Headings

  • Medical Informatics
  • Biomedical Engineering
  • 4601 Applied computing
  • 4203 Health services and systems
  • 11 Medical and Health Sciences
  • 08 Information and Computing Sciences
  • 06 Biological Sciences