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Federated and distributed learning applications for electronic health records and structured medical data: a scoping review.

Publication ,  Journal Article
Li, S; Liu, P; Nascimento, GG; Wang, X; Leite, FRM; Chakraborty, B; Hong, C; Ning, Y; Xie, F; Teo, ZL; Ting, DSW; Haddadi, H; Ong, MEH ...
Published in: J Am Med Inform Assoc
November 17, 2023

OBJECTIVES: Federated learning (FL) has gained popularity in clinical research in recent years to facilitate privacy-preserving collaboration. Structured data, one of the most prevalent forms of clinical data, has experienced significant growth in volume concurrently, notably with the widespread adoption of electronic health records in clinical practice. This review examines FL applications on structured medical data, identifies contemporary limitations, and discusses potential innovations. MATERIALS AND METHODS: We searched 5 databases, SCOPUS, MEDLINE, Web of Science, Embase, and CINAHL, to identify articles that applied FL to structured medical data and reported results following the PRISMA guidelines. Each selected publication was evaluated from 3 primary perspectives, including data quality, modeling strategies, and FL frameworks. RESULTS: Out of the 1193 papers screened, 34 met the inclusion criteria, with each article consisting of one or more studies that used FL to handle structured clinical/medical data. Of these, 24 utilized data acquired from electronic health records, with clinical predictions and association studies being the most common clinical research tasks that FL was applied to. Only one article exclusively explored the vertical FL setting, while the remaining 33 explored the horizontal FL setting, with only 14 discussing comparisons between single-site (local) and FL (global) analysis. CONCLUSIONS: The existing FL applications on structured medical data lack sufficient evaluations of clinically meaningful benefits, particularly when compared to single-site analyses. Therefore, it is crucial for future FL applications to prioritize clinical motivations and develop designs and methodologies that can effectively support and aid clinical practice and research.

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Published In

J Am Med Inform Assoc

DOI

EISSN

1527-974X

Publication Date

November 17, 2023

Volume

30

Issue

12

Start / End Page

2041 / 2049

Location

England

Related Subject Headings

  • Motivation
  • Medical Informatics
  • Learning
  • Electronic Health Records
  • Databases, Factual
  • Data Accuracy
  • 46 Information and computing sciences
  • 42 Health sciences
  • 32 Biomedical and clinical sciences
  • 11 Medical and Health Sciences
 

Citation

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Li, S., Liu, P., Nascimento, G. G., Wang, X., Leite, F. R. M., Chakraborty, B., … Liu, N. (2023). Federated and distributed learning applications for electronic health records and structured medical data: a scoping review. J Am Med Inform Assoc, 30(12), 2041–2049. https://doi.org/10.1093/jamia/ocad170
Li, Siqi, Pinyan Liu, Gustavo G. Nascimento, Xinru Wang, Fabio Renato Manzolli Leite, Bibhas Chakraborty, Chuan Hong, et al. “Federated and distributed learning applications for electronic health records and structured medical data: a scoping review.J Am Med Inform Assoc 30, no. 12 (November 17, 2023): 2041–49. https://doi.org/10.1093/jamia/ocad170.
Li S, Liu P, Nascimento GG, Wang X, Leite FRM, Chakraborty B, et al. Federated and distributed learning applications for electronic health records and structured medical data: a scoping review. J Am Med Inform Assoc. 2023 Nov 17;30(12):2041–9.
Li, Siqi, et al. “Federated and distributed learning applications for electronic health records and structured medical data: a scoping review.J Am Med Inform Assoc, vol. 30, no. 12, Nov. 2023, pp. 2041–49. Pubmed, doi:10.1093/jamia/ocad170.
Li S, Liu P, Nascimento GG, Wang X, Leite FRM, Chakraborty B, Hong C, Ning Y, Xie F, Teo ZL, Ting DSW, Haddadi H, Ong MEH, Peres MA, Liu N. Federated and distributed learning applications for electronic health records and structured medical data: a scoping review. J Am Med Inform Assoc. 2023 Nov 17;30(12):2041–2049.
Journal cover image

Published In

J Am Med Inform Assoc

DOI

EISSN

1527-974X

Publication Date

November 17, 2023

Volume

30

Issue

12

Start / End Page

2041 / 2049

Location

England

Related Subject Headings

  • Motivation
  • Medical Informatics
  • Learning
  • Electronic Health Records
  • Databases, Factual
  • Data Accuracy
  • 46 Information and computing sciences
  • 42 Health sciences
  • 32 Biomedical and clinical sciences
  • 11 Medical and Health Sciences