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Model Generalizability Investigation for GFCE-MRI Synthesis in NPC Radiotherapy Using Multi-Institutional Patient-Based Data Normalization.

Publication ,  Journal Article
Li, W; Lam, S; Wang, Y; Liu, C; Li, T; Kleesiek, J; Cheung, AL-Y; Sun, Y; Lee, FK-H; Au, K-H; Lee, VH-F; Cai, J
Published in: IEEE J Biomed Health Inform
January 2024

Recently, deep learning has been demonstrated to be feasible in eliminating the use of gadoliniumbased contrast agents (GBCAs) through synthesizing gadolinium-free contrast-enhanced MRI (GFCE-MRI) from contrast-free MRI sequences, providing the community with an alternative to get rid of GBCAs-associated safety issues in patients. Nevertheless, generalizability assessment of the GFCE-MRI model has been largely challenged by the high inter-institutional heterogeneity of MRI data, on top of the scarcity of multi-institutional data itself. Although various data normalization methods have been adopted to address the heterogeneity issue, it has been limited to single-institutional investigation and there is no standard normalization approach presently. In this study, we aimed at investigating generalizability of GFCE-MRI model using data from seven institutions by manipulating heterogeneity of MRI data under five popular normalization approaches. Three state-of-the-art neural networks were applied to map from T1-weighted and T2-weighted MRI to contrast-enhanced MRI (CE-MRI) for GFCE-MRI synthesis in patients with nasopharyngeal carcinoma. MRI data from three institutions were used separately to generate three uni-institution models and jointly for a tri-institution model. The five normalization methods were applied to normalize the data of each model. MRI data from the remaining four institutions served as external cohorts for model generalizability assessment. Quality of GFCE-MRI was quantitatively evaluated against ground-truth CE-MRI using mean absolute error (MAE) and peak signal-to-noise ratio(PSNR). Results showed that performance of all uni-institution models remarkably dropped on the external cohorts. By contrast, model trained using multi-institutional data with Z-Score normalization yielded the best model generalizability improvement.

Duke Scholars

Published In

IEEE J Biomed Health Inform

DOI

EISSN

2168-2208

Publication Date

January 2024

Volume

28

Issue

1

Start / End Page

100 / 109

Location

United States

Related Subject Headings

  • Signal-To-Noise Ratio
  • Neural Networks, Computer
  • Magnetic Resonance Imaging
  • Humans
  • Gadolinium
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Li, W., Lam, S., Wang, Y., Liu, C., Li, T., Kleesiek, J., … Cai, J. (2024). Model Generalizability Investigation for GFCE-MRI Synthesis in NPC Radiotherapy Using Multi-Institutional Patient-Based Data Normalization. IEEE J Biomed Health Inform, 28(1), 100–109. https://doi.org/10.1109/JBHI.2023.3308529
Li, Wen, Saikit Lam, Yinghui Wang, Chenyang Liu, Tian Li, Jens Kleesiek, Andy Lai-Yin Cheung, et al. “Model Generalizability Investigation for GFCE-MRI Synthesis in NPC Radiotherapy Using Multi-Institutional Patient-Based Data Normalization.IEEE J Biomed Health Inform 28, no. 1 (January 2024): 100–109. https://doi.org/10.1109/JBHI.2023.3308529.
Li W, Lam S, Wang Y, Liu C, Li T, Kleesiek J, et al. Model Generalizability Investigation for GFCE-MRI Synthesis in NPC Radiotherapy Using Multi-Institutional Patient-Based Data Normalization. IEEE J Biomed Health Inform. 2024 Jan;28(1):100–9.
Li, Wen, et al. “Model Generalizability Investigation for GFCE-MRI Synthesis in NPC Radiotherapy Using Multi-Institutional Patient-Based Data Normalization.IEEE J Biomed Health Inform, vol. 28, no. 1, Jan. 2024, pp. 100–09. Pubmed, doi:10.1109/JBHI.2023.3308529.
Li W, Lam S, Wang Y, Liu C, Li T, Kleesiek J, Cheung AL-Y, Sun Y, Lee FK-H, Au K-H, Lee VH-F, Cai J. Model Generalizability Investigation for GFCE-MRI Synthesis in NPC Radiotherapy Using Multi-Institutional Patient-Based Data Normalization. IEEE J Biomed Health Inform. 2024 Jan;28(1):100–109.

Published In

IEEE J Biomed Health Inform

DOI

EISSN

2168-2208

Publication Date

January 2024

Volume

28

Issue

1

Start / End Page

100 / 109

Location

United States

Related Subject Headings

  • Signal-To-Noise Ratio
  • Neural Networks, Computer
  • Magnetic Resonance Imaging
  • Humans
  • Gadolinium