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Forty Years of Oxalobacter formigenes, a Gutsy Oxalate-Degrading Specialist.

Publication ,  Journal Article
Daniel, SL; Moradi, L; Paiste, H; Wood, KD; Assimos, DG; Holmes, RP; Nazzal, L; Hatch, M; Knight, J
Published in: Appl Environ Microbiol
August 26, 2021

Oxalobacter formigenes, a unique anaerobic bacterium that relies solely on oxalate for growth, is a key oxalate-degrading bacterium in the mammalian intestinal tract. Degradation of oxalate in the gut by O. formigenes plays a critical role in preventing renal toxicity in animals that feed on oxalate-rich plants. The role of O. formigenes in reducing the risk of calcium oxalate kidney stone disease and oxalate nephropathy in humans is less clear, in part due to difficulties in culturing this organism and the lack of studies which have utilized diets in which the oxalate content is controlled. Herein, we review the literature on the 40th anniversary of the discovery of O. formigenes, with a focus on its biology, its role in gut oxalate metabolism and calcium oxalate kidney stone disease, and potential areas of future research. Results from ongoing clinical trials utilizing O. formigenes in healthy volunteers and in patients with primary hyperoxaluria type 1 (PH1), a rare but severe form of calcium oxalate kidney stone disease, are also discussed. Information has been consolidated on O. formigenes strains and best practices to culture this bacterium, which should serve as a good resource for researchers.

Duke Scholars

Published In

Appl Environ Microbiol

DOI

EISSN

1098-5336

Publication Date

August 26, 2021

Volume

87

Issue

18

Start / End Page

e0054421

Location

United States

Related Subject Headings

  • Oxalobacter formigenes
  • Oxalates
  • Nephrolithiasis
  • Microbiology
  • Metabolomics
  • Inactivation, Metabolic
  • Humans
  • Genomics
  • Gastrointestinal Microbiome
  • Animals
 

Citation

APA
Chicago
ICMJE
MLA
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Daniel, S. L., Moradi, L., Paiste, H., Wood, K. D., Assimos, D. G., Holmes, R. P., … Knight, J. (2021). Forty Years of Oxalobacter formigenes, a Gutsy Oxalate-Degrading Specialist. Appl Environ Microbiol, 87(18), e0054421. https://doi.org/10.1128/AEM.00544-21
Daniel, Steven L., Luke Moradi, Henry Paiste, Kyle D. Wood, Dean G. Assimos, Ross P. Holmes, Lama Nazzal, Marguerite Hatch, and John Knight. “Forty Years of Oxalobacter formigenes, a Gutsy Oxalate-Degrading Specialist.Appl Environ Microbiol 87, no. 18 (August 26, 2021): e0054421. https://doi.org/10.1128/AEM.00544-21.
Daniel SL, Moradi L, Paiste H, Wood KD, Assimos DG, Holmes RP, et al. Forty Years of Oxalobacter formigenes, a Gutsy Oxalate-Degrading Specialist. Appl Environ Microbiol. 2021 Aug 26;87(18):e0054421.
Daniel, Steven L., et al. “Forty Years of Oxalobacter formigenes, a Gutsy Oxalate-Degrading Specialist.Appl Environ Microbiol, vol. 87, no. 18, Aug. 2021, p. e0054421. Pubmed, doi:10.1128/AEM.00544-21.
Daniel SL, Moradi L, Paiste H, Wood KD, Assimos DG, Holmes RP, Nazzal L, Hatch M, Knight J. Forty Years of Oxalobacter formigenes, a Gutsy Oxalate-Degrading Specialist. Appl Environ Microbiol. 2021 Aug 26;87(18):e0054421.

Published In

Appl Environ Microbiol

DOI

EISSN

1098-5336

Publication Date

August 26, 2021

Volume

87

Issue

18

Start / End Page

e0054421

Location

United States

Related Subject Headings

  • Oxalobacter formigenes
  • Oxalates
  • Nephrolithiasis
  • Microbiology
  • Metabolomics
  • Inactivation, Metabolic
  • Humans
  • Genomics
  • Gastrointestinal Microbiome
  • Animals