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Phenotype-Genotype Correlations and Estimated Carrier Frequencies of Primary Hyperoxaluria.

Publication ,  Journal Article
Hopp, K; Cogal, AG; Bergstralh, EJ; Seide, BM; Olson, JB; Meek, AM; Lieske, JC; Milliner, DS; Harris, PC; Rare Kidney Stone Consortium
Published in: J Am Soc Nephrol
October 2015

Primary hyperoxaluria (PH) is a rare autosomal recessive disease characterized by oxalate accumulation in the kidneys and other organs. Three loci have been identified: AGXT (PH1), GRHPR (PH2), and HOGA1 (PH3). Here, we compared genotype to phenotype in 355 patients in the Rare Kidney Stone Consortium PH registry and calculated prevalence using publicly available whole-exome data. PH1 (68.4% of families) was the most severe PH type, whereas PH3 (11.0% of families) showed the slowest decline in renal function but the earliest symptoms. A group of patients with disease progression similar to that of PH3, but for whom no mutation was detected (11.3% of families), suggested further genetic heterogeneity. We confirmed that the AGXT p.G170R mistargeting allele resulted in a milder PH1 phenotype; however, other potential AGXT mistargeting alleles caused more severe (fully penetrant) disease. We identified the first PH3 patient with ESRD; a homozygote for two linked, novel missense mutations. Population analysis suggested that PH is an order of magnitude more common than determined from clinical cohorts (prevalence, approximately 1:58,000; carrier frequency, approximately 1:70). We estimated PH to be approximately three times less prevalent among African Americans than among European Americans because of a limited number of common European origin alleles. PH3 was predicted to be as prevalent as PH1 and twice as common as PH2, indicating that PH3 (and PH2) cases are underdiagnosed and/or incompletely penetrant. These results highlight a role for molecular analyses in PH diagnostics and prognostics and suggest that wider analysis of the idiopathic stone-forming population may be beneficial.

Duke Scholars

Published In

J Am Soc Nephrol

DOI

EISSN

1533-3450

Publication Date

October 2015

Volume

26

Issue

10

Start / End Page

2559 / 2570

Location

United States

Related Subject Headings

  • Young Adult
  • Urology & Nephrology
  • Middle Aged
  • Infant
  • Hyperoxaluria, Primary
  • Humans
  • Heterozygote
  • Genetic Association Studies
  • Child, Preschool
  • Child
 

Citation

APA
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ICMJE
MLA
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Hopp, K., Cogal, A. G., Bergstralh, E. J., Seide, B. M., Olson, J. B., Meek, A. M., … Rare Kidney Stone Consortium. (2015). Phenotype-Genotype Correlations and Estimated Carrier Frequencies of Primary Hyperoxaluria. J Am Soc Nephrol, 26(10), 2559–2570. https://doi.org/10.1681/ASN.2014070698
Hopp, Katharina, Andrea G. Cogal, Eric J. Bergstralh, Barbara M. Seide, Julie B. Olson, Alicia M. Meek, John C. Lieske, Dawn S. Milliner, Peter C. Harris, and Rare Kidney Stone Consortium. “Phenotype-Genotype Correlations and Estimated Carrier Frequencies of Primary Hyperoxaluria.J Am Soc Nephrol 26, no. 10 (October 2015): 2559–70. https://doi.org/10.1681/ASN.2014070698.
Hopp K, Cogal AG, Bergstralh EJ, Seide BM, Olson JB, Meek AM, et al. Phenotype-Genotype Correlations and Estimated Carrier Frequencies of Primary Hyperoxaluria. J Am Soc Nephrol. 2015 Oct;26(10):2559–70.
Hopp, Katharina, et al. “Phenotype-Genotype Correlations and Estimated Carrier Frequencies of Primary Hyperoxaluria.J Am Soc Nephrol, vol. 26, no. 10, Oct. 2015, pp. 2559–70. Pubmed, doi:10.1681/ASN.2014070698.
Hopp K, Cogal AG, Bergstralh EJ, Seide BM, Olson JB, Meek AM, Lieske JC, Milliner DS, Harris PC, Rare Kidney Stone Consortium. Phenotype-Genotype Correlations and Estimated Carrier Frequencies of Primary Hyperoxaluria. J Am Soc Nephrol. 2015 Oct;26(10):2559–2570.

Published In

J Am Soc Nephrol

DOI

EISSN

1533-3450

Publication Date

October 2015

Volume

26

Issue

10

Start / End Page

2559 / 2570

Location

United States

Related Subject Headings

  • Young Adult
  • Urology & Nephrology
  • Middle Aged
  • Infant
  • Hyperoxaluria, Primary
  • Humans
  • Heterozygote
  • Genetic Association Studies
  • Child, Preschool
  • Child