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Curation of food-relevant chemicals in ToxCast.

Publication ,  Journal Article
Karmaus, AL; Trautman, TD; Krishan, M; Filer, DL; Fix, LA
Published in: Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association
May 2017

High-throughput in vitro assays and exposure prediction efforts are paving the way for modeling chemical risk; however, the utility of such extensive datasets can be limited or misleading when annotation fails to capture current chemical usage. To address this data gap and provide context for food-use in the United States (US), manual curation of food-relevant chemicals in ToxCast was conducted. Chemicals were categorized into three food-use categories: (1) direct food additives, (2) indirect food additives, or (3) pesticide residues. Manual curation resulted in 30% of chemicals having new annotation as well as the removal of 319 chemicals, most due to cancellation or only foreign usage. These results highlight that manual curation of chemical use information provided significant insight affecting the overall inventory and chemical categorization. In total, 1211 chemicals were confirmed as current day food-use in the US by manual curation; 1154 of these chemicals were also identified as food-related in the globally sourced chemical use information from Chemical/Product Categories database (CPCat). The refined list of food-use chemicals and the sources highlighted for compiling annotated information required to confirm food-use are valuable resources for providing needed context when evaluating large-scale inventories such as ToxCast.

Duke Scholars

Published In

Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association

DOI

EISSN

1873-6351

ISSN

0278-6915

Publication Date

May 2017

Volume

103

Start / End Page

174 / 182

Related Subject Headings

  • United States
  • Toxicity Tests
  • Pesticide Residues
  • Food Science
  • Food Contamination
  • Food Analysis
  • Food Additives
  • Databases, Factual
  • 3214 Pharmacology and pharmaceutical sciences
  • 3006 Food sciences
 

Citation

APA
Chicago
ICMJE
MLA
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Karmaus, A. L., Trautman, T. D., Krishan, M., Filer, D. L., & Fix, L. A. (2017). Curation of food-relevant chemicals in ToxCast. Food and Chemical Toxicology : An International Journal Published for the British Industrial Biological Research Association, 103, 174–182. https://doi.org/10.1016/j.fct.2017.03.006
Karmaus, Agnes L., Thomas D. Trautman, Mansi Krishan, Dayne L. Filer, and Laurel A. Fix. “Curation of food-relevant chemicals in ToxCast.Food and Chemical Toxicology : An International Journal Published for the British Industrial Biological Research Association 103 (May 2017): 174–82. https://doi.org/10.1016/j.fct.2017.03.006.
Karmaus AL, Trautman TD, Krishan M, Filer DL, Fix LA. Curation of food-relevant chemicals in ToxCast. Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association. 2017 May;103:174–82.
Karmaus, Agnes L., et al. “Curation of food-relevant chemicals in ToxCast.Food and Chemical Toxicology : An International Journal Published for the British Industrial Biological Research Association, vol. 103, May 2017, pp. 174–82. Epmc, doi:10.1016/j.fct.2017.03.006.
Karmaus AL, Trautman TD, Krishan M, Filer DL, Fix LA. Curation of food-relevant chemicals in ToxCast. Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association. 2017 May;103:174–182.
Journal cover image

Published In

Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association

DOI

EISSN

1873-6351

ISSN

0278-6915

Publication Date

May 2017

Volume

103

Start / End Page

174 / 182

Related Subject Headings

  • United States
  • Toxicity Tests
  • Pesticide Residues
  • Food Science
  • Food Contamination
  • Food Analysis
  • Food Additives
  • Databases, Factual
  • 3214 Pharmacology and pharmaceutical sciences
  • 3006 Food sciences