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Towards Engineering Biological Systems in a Broader Context.

Publication ,  Journal Article
Venturelli, OS; Egbert, RG; Arkin, AP
Published in: Journal of molecular biology
February 2016

Significant advances have been made in synthetic biology to program information processing capabilities in cells. While these designs can function predictably in controlled laboratory environments, the reliability of these devices in complex, temporally changing environments has not yet been characterized. As human society faces global challenges in agriculture, human health and energy, synthetic biology should develop predictive design principles for biological systems operating in complex environments. Natural biological systems have evolved mechanisms to overcome innumerable and diverse environmental challenges. Evolutionary design rules should be extracted and adapted to engineer stable and predictable ecological function. We highlight examples of natural biological responses spanning the cellular, population and microbial community levels that show promise in synthetic biology contexts. We argue that synthetic circuits embedded in host organisms or designed ecologies informed by suitable measurement of biotic and abiotic environmental parameters could be used as engineering substrates to achieve target functions in complex environments. Successful implementation of these methods will broaden the context in which synthetic biological systems can be applied to solve important problems.

Duke Scholars

Published In

Journal of molecular biology

DOI

EISSN

1089-8638

ISSN

0022-2836

Publication Date

February 2016

Volume

428

Issue

5 Pt B

Start / End Page

928 / 944

Related Subject Headings

  • Synthetic Biology
  • Humans
  • Gene Regulatory Networks
  • Evolution, Molecular
  • Cell Engineering
  • Biochemistry & Molecular Biology
  • Adaptation, Biological
  • 3107 Microbiology
  • 3101 Biochemistry and cell biology
  • 0605 Microbiology
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Venturelli, O. S., Egbert, R. G., & Arkin, A. P. (2016). Towards Engineering Biological Systems in a Broader Context. Journal of Molecular Biology, 428(5 Pt B), 928–944. https://doi.org/10.1016/j.jmb.2015.10.025
Venturelli, Ophelia S., Robert G. Egbert, and Adam P. Arkin. “Towards Engineering Biological Systems in a Broader Context.Journal of Molecular Biology 428, no. 5 Pt B (February 2016): 928–44. https://doi.org/10.1016/j.jmb.2015.10.025.
Venturelli OS, Egbert RG, Arkin AP. Towards Engineering Biological Systems in a Broader Context. Journal of molecular biology. 2016 Feb;428(5 Pt B):928–44.
Venturelli, Ophelia S., et al. “Towards Engineering Biological Systems in a Broader Context.Journal of Molecular Biology, vol. 428, no. 5 Pt B, Feb. 2016, pp. 928–44. Epmc, doi:10.1016/j.jmb.2015.10.025.
Venturelli OS, Egbert RG, Arkin AP. Towards Engineering Biological Systems in a Broader Context. Journal of molecular biology. 2016 Feb;428(5 Pt B):928–944.
Journal cover image

Published In

Journal of molecular biology

DOI

EISSN

1089-8638

ISSN

0022-2836

Publication Date

February 2016

Volume

428

Issue

5 Pt B

Start / End Page

928 / 944

Related Subject Headings

  • Synthetic Biology
  • Humans
  • Gene Regulatory Networks
  • Evolution, Molecular
  • Cell Engineering
  • Biochemistry & Molecular Biology
  • Adaptation, Biological
  • 3107 Microbiology
  • 3101 Biochemistry and cell biology
  • 0605 Microbiology