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A large-scale machine learning analysis of inorganic nanoparticles in preclinical cancer research.

Publication ,  Journal Article
Mendes, BB; Zhang, Z; Conniot, J; Sousa, DP; Ravasco, JMJM; Onweller, LA; Lorenc, A; Rodrigues, T; Reker, D; Conde, J
Published in: Nature nanotechnology
June 2024

Owing to their distinct physical and chemical properties, inorganic nanoparticles (NPs) have shown promising results in preclinical cancer therapy, but designing and engineering them for effective therapeutic purposes remains a challenge. Although a comprehensive database of inorganic NP research is not currently available, it is crucial for developing effective cancer therapies. In this context, machine learning (ML) has emerged as a transformative tool, but its adaptation to nanomedicine is hindered by inexistent or small datasets. Here we assembled a large database of inorganic NPs, comprising experimental datasets from 745 preclinical studies in cancer nanomedicine. Using descriptive statistics and explainable ML models we mined this database to gain knowledge of inorganic NP design patterns and inform future NP research for cancer treatment. Our analyses suggest that NP shape and therapy type are prominent features in determining in vivo efficacy, measured as a percentage of tumour reduction. Moreover, our database provides a large-scale open-access resource for discriminative ML that the broader nanotechnology community can utilize. Our work blueprints data mining for translational cancer research and offers evidence for standardizing NP reporting to accelerate and de-risk inorganic NP-based drug delivery, which may help to improve patient outcomes in clinical settings.

Duke Scholars

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Published In

Nature nanotechnology

DOI

EISSN

1748-3395

ISSN

1748-3387

Publication Date

June 2024

Volume

19

Issue

6

Start / End Page

867 / 878

Related Subject Headings

  • Neoplasms
  • Nanoscience & Nanotechnology
  • Nanoparticles
  • Nanomedicine
  • Mice
  • Machine Learning
  • Humans
  • Databases, Factual
  • Antineoplastic Agents
  • Animals
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Mendes, B. B., Zhang, Z., Conniot, J., Sousa, D. P., Ravasco, J. M. J. M., Onweller, L. A., … Conde, J. (2024). A large-scale machine learning analysis of inorganic nanoparticles in preclinical cancer research. Nature Nanotechnology, 19(6), 867–878. https://doi.org/10.1038/s41565-024-01673-7
Mendes, Bárbara B., Zilu Zhang, João Conniot, Diana P. Sousa, João M. J. M. Ravasco, Lauren A. Onweller, Andżelika Lorenc, Tiago Rodrigues, Daniel Reker, and João Conde. “A large-scale machine learning analysis of inorganic nanoparticles in preclinical cancer research.Nature Nanotechnology 19, no. 6 (June 2024): 867–78. https://doi.org/10.1038/s41565-024-01673-7.
Mendes BB, Zhang Z, Conniot J, Sousa DP, Ravasco JMJM, Onweller LA, et al. A large-scale machine learning analysis of inorganic nanoparticles in preclinical cancer research. Nature nanotechnology. 2024 Jun;19(6):867–78.
Mendes, Bárbara B., et al. “A large-scale machine learning analysis of inorganic nanoparticles in preclinical cancer research.Nature Nanotechnology, vol. 19, no. 6, June 2024, pp. 867–78. Epmc, doi:10.1038/s41565-024-01673-7.
Mendes BB, Zhang Z, Conniot J, Sousa DP, Ravasco JMJM, Onweller LA, Lorenc A, Rodrigues T, Reker D, Conde J. A large-scale machine learning analysis of inorganic nanoparticles in preclinical cancer research. Nature nanotechnology. 2024 Jun;19(6):867–878.

Published In

Nature nanotechnology

DOI

EISSN

1748-3395

ISSN

1748-3387

Publication Date

June 2024

Volume

19

Issue

6

Start / End Page

867 / 878

Related Subject Headings

  • Neoplasms
  • Nanoscience & Nanotechnology
  • Nanoparticles
  • Nanomedicine
  • Mice
  • Machine Learning
  • Humans
  • Databases, Factual
  • Antineoplastic Agents
  • Animals