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BOLD: Blood-gas and Oximetry Linked Dataset.

Publication ,  Journal Article
Matos, J; Struja, T; Gallifant, J; Nakayama, L; Charpignon, M-L; Liu, X; Economou-Zavlanos, N; S Cardoso, J; Johnson, KS; Bhavsar, N; Celi, LA ...
Published in: Sci Data
May 24, 2024

Pulse oximeters measure peripheral arterial oxygen saturation (SpO2) noninvasively, while the gold standard (SaO2) involves arterial blood gas measurement. There are known racial and ethnic disparities in their performance. BOLD is a dataset that aims to underscore the importance of addressing biases in pulse oximetry accuracy, which disproportionately affect darker-skinned patients. The dataset was created by harmonizing three Electronic Health Record databases (MIMIC-III, MIMIC-IV, eICU-CRD) comprising Intensive Care Unit stays of US patients. Paired SpO2 and SaO2 measurements were time-aligned and combined with various other sociodemographic and parameters to provide a detailed representation of each patient. BOLD includes 49,099 paired measurements, within a 5-minute window and with oxygen saturation levels between 70-100%. Minority racial and ethnic groups account for ~25% of the data - a proportion seldom achieved in previous studies. The codebase is publicly available. Given the prevalent use of pulse oximeters in the hospital and at home, we hope that BOLD will be leveraged to develop debiasing algorithms that can result in more equitable healthcare solutions.

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Published In

Sci Data

DOI

EISSN

2052-4463

Publication Date

May 24, 2024

Volume

11

Issue

1

Start / End Page

535

Location

England

Related Subject Headings

  • Oxygen Saturation
  • Oxygen
  • Oximetry
  • Intensive Care Units
  • Humans
  • Ethnicity
  • Blood Gas Analysis
 

Citation

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Matos, J., Struja, T., Gallifant, J., Nakayama, L., Charpignon, M.-L., Liu, X., … Wong, A.-K. (2024). BOLD: Blood-gas and Oximetry Linked Dataset. Sci Data, 11(1), 535. https://doi.org/10.1038/s41597-024-03225-z
Matos, João, Tristan Struja, Jack Gallifant, Luis Nakayama, Marie-Laure Charpignon, Xiaoli Liu, Nicoleta Economou-Zavlanos, et al. “BOLD: Blood-gas and Oximetry Linked Dataset.Sci Data 11, no. 1 (May 24, 2024): 535. https://doi.org/10.1038/s41597-024-03225-z.
Matos J, Struja T, Gallifant J, Nakayama L, Charpignon M-L, Liu X, et al. BOLD: Blood-gas and Oximetry Linked Dataset. Sci Data. 2024 May 24;11(1):535.
Matos, João, et al. “BOLD: Blood-gas and Oximetry Linked Dataset.Sci Data, vol. 11, no. 1, May 2024, p. 535. Pubmed, doi:10.1038/s41597-024-03225-z.
Matos J, Struja T, Gallifant J, Nakayama L, Charpignon M-L, Liu X, Economou-Zavlanos N, S Cardoso J, Johnson KS, Bhavsar N, Gichoya J, Celi LA, Wong A-KI. BOLD: Blood-gas and Oximetry Linked Dataset. Sci Data. 2024 May 24;11(1):535.

Published In

Sci Data

DOI

EISSN

2052-4463

Publication Date

May 24, 2024

Volume

11

Issue

1

Start / End Page

535

Location

England

Related Subject Headings

  • Oxygen Saturation
  • Oxygen
  • Oximetry
  • Intensive Care Units
  • Humans
  • Ethnicity
  • Blood Gas Analysis