Skip to main content
Journal cover image

Clinical domain knowledge-derived template improves post hoc AI explanations in pneumothorax classification.

Publication ,  Journal Article
Yuan, H; Hong, C; Jiang, P-T; Zhao, G; Tran, NTA; Xu, X; Yan, YY; Liu, N
Published in: J Biomed Inform
August 2024

OBJECTIVE: Pneumothorax is an acute thoracic disease caused by abnormal air collection between the lungs and chest wall. Recently, artificial intelligence (AI), especially deep learning (DL), has been increasingly employed for automating the diagnostic process of pneumothorax. To address the opaqueness often associated with DL models, explainable artificial intelligence (XAI) methods have been introduced to outline regions related to pneumothorax. However, these explanations sometimes diverge from actual lesion areas, highlighting the need for further improvement. METHOD: We propose a template-guided approach to incorporate the clinical knowledge of pneumothorax into model explanations generated by XAI methods, thereby enhancing the quality of the explanations. Utilizing one lesion delineation created by radiologists, our approach first generates a template that represents potential areas of pneumothorax occurrence. This template is then superimposed on model explanations to filter out extraneous explanations that fall outside the template's boundaries. To validate its efficacy, we carried out a comparative analysis of three XAI methods (Saliency Map, Grad-CAM, and Integrated Gradients) with and without our template guidance when explaining two DL models (VGG-19 and ResNet-50) in two real-world datasets (SIIM-ACR and ChestX-Det). RESULTS: The proposed approach consistently improved baseline XAI methods across twelve benchmark scenarios built on three XAI methods, two DL models, and two datasets. The average incremental percentages, calculated by the performance improvements over the baseline performance, were 97.8% in Intersection over Union (IoU) and 94.1% in Dice Similarity Coefficient (DSC) when comparing model explanations and ground-truth lesion areas. We further visualized baseline and template-guided model explanations on radiographs to showcase the performance of our approach. CONCLUSIONS: In the context of pneumothorax diagnoses, we proposed a template-guided approach for improving model explanations. Our approach not only aligns model explanations more closely with clinical insights but also exhibits extensibility to other thoracic diseases. We anticipate that our template guidance will forge a novel approach to elucidating AI models by integrating clinical domain expertise.

Duke Scholars

Altmetric Attention Stats
Dimensions Citation Stats

Published In

J Biomed Inform

DOI

EISSN

1532-0480

Publication Date

August 2024

Volume

156

Start / End Page

104673

Location

United States

Related Subject Headings

  • Tomography, X-Ray Computed
  • Pneumothorax
  • Medical Informatics
  • Medical Informatics
  • Humans
  • Deep Learning
  • Biomedical Engineering
  • Artificial Intelligence
  • Algorithms
  • 4601 Applied computing
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Yuan, H., Hong, C., Jiang, P.-T., Zhao, G., Tran, N. T. A., Xu, X., … Liu, N. (2024). Clinical domain knowledge-derived template improves post hoc AI explanations in pneumothorax classification. J Biomed Inform, 156, 104673. https://doi.org/10.1016/j.jbi.2024.104673
Yuan, Han, Chuan Hong, Peng-Tao Jiang, Gangming Zhao, Nguyen Tuan Anh Tran, Xinxing Xu, Yet Yen Yan, and Nan Liu. “Clinical domain knowledge-derived template improves post hoc AI explanations in pneumothorax classification.J Biomed Inform 156 (August 2024): 104673. https://doi.org/10.1016/j.jbi.2024.104673.
Yuan H, Hong C, Jiang P-T, Zhao G, Tran NTA, Xu X, et al. Clinical domain knowledge-derived template improves post hoc AI explanations in pneumothorax classification. J Biomed Inform. 2024 Aug;156:104673.
Yuan, Han, et al. “Clinical domain knowledge-derived template improves post hoc AI explanations in pneumothorax classification.J Biomed Inform, vol. 156, Aug. 2024, p. 104673. Pubmed, doi:10.1016/j.jbi.2024.104673.
Yuan H, Hong C, Jiang P-T, Zhao G, Tran NTA, Xu X, Yan YY, Liu N. Clinical domain knowledge-derived template improves post hoc AI explanations in pneumothorax classification. J Biomed Inform. 2024 Aug;156:104673.
Journal cover image

Published In

J Biomed Inform

DOI

EISSN

1532-0480

Publication Date

August 2024

Volume

156

Start / End Page

104673

Location

United States

Related Subject Headings

  • Tomography, X-Ray Computed
  • Pneumothorax
  • Medical Informatics
  • Medical Informatics
  • Humans
  • Deep Learning
  • Biomedical Engineering
  • Artificial Intelligence
  • Algorithms
  • 4601 Applied computing