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Endogenous retroviruses drive species-specific germline transcriptomes in mammals.

Publication ,  Journal Article
Sakashita, A; Maezawa, S; Takahashi, K; Alavattam, KG; Yukawa, M; Hu, Y-C; Kojima, S; Parrish, NF; Barski, A; Pavlicev, M; Namekawa, SH
Published in: Nature structural & molecular biology
October 2020

Gene regulation in the germline ensures the production of high-quality gametes, long-term maintenance of the species and speciation. Male germline transcriptomes undergo dynamic changes after the mitosis-to-meiosis transition and have been subject to evolutionary divergence among mammals. However, the mechanisms underlying germline regulatory divergence remain undetermined. Here, we show that endogenous retroviruses (ERVs) influence species-specific germline transcriptomes. After the mitosis-to-meiosis transition in male mice, specific ERVs function as active enhancers to drive germline genes, including a mouse-specific gene set, and bear binding motifs for critical regulators of spermatogenesis, such as A-MYB. This raises the possibility that a genome-wide transposition of ERVs rewired germline gene expression in a species-specific manner. Of note, independently evolved ERVs are associated with the expression of human-specific germline genes, demonstrating the prevalence of ERV-driven mechanisms in mammals. Together, we propose that ERVs fine-tune species-specific transcriptomes in the mammalian germline.

Duke Scholars

Published In

Nature structural & molecular biology

DOI

EISSN

1545-9985

ISSN

1545-9993

Publication Date

October 2020

Volume

27

Issue

10

Start / End Page

967 / 977

Related Subject Headings

  • Transcriptome
  • Trans-Activators
  • Spermatozoa
  • Spermatogenesis
  • Rodentia
  • Repetitive Sequences, Nucleic Acid
  • Proto-Oncogene Proteins c-myb
  • Mutation
  • Mitosis
  • Mice, Transgenic
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Sakashita, A., Maezawa, S., Takahashi, K., Alavattam, K. G., Yukawa, M., Hu, Y.-C., … Namekawa, S. H. (2020). Endogenous retroviruses drive species-specific germline transcriptomes in mammals. Nature Structural & Molecular Biology, 27(10), 967–977. https://doi.org/10.1038/s41594-020-0487-4
Sakashita, Akihiko, So Maezawa, Kazuki Takahashi, Kris G. Alavattam, Masashi Yukawa, Yueh-Chiang Hu, Shohei Kojima, et al. “Endogenous retroviruses drive species-specific germline transcriptomes in mammals.Nature Structural & Molecular Biology 27, no. 10 (October 2020): 967–77. https://doi.org/10.1038/s41594-020-0487-4.
Sakashita A, Maezawa S, Takahashi K, Alavattam KG, Yukawa M, Hu Y-C, et al. Endogenous retroviruses drive species-specific germline transcriptomes in mammals. Nature structural & molecular biology. 2020 Oct;27(10):967–77.
Sakashita, Akihiko, et al. “Endogenous retroviruses drive species-specific germline transcriptomes in mammals.Nature Structural & Molecular Biology, vol. 27, no. 10, Oct. 2020, pp. 967–77. Epmc, doi:10.1038/s41594-020-0487-4.
Sakashita A, Maezawa S, Takahashi K, Alavattam KG, Yukawa M, Hu Y-C, Kojima S, Parrish NF, Barski A, Pavlicev M, Namekawa SH. Endogenous retroviruses drive species-specific germline transcriptomes in mammals. Nature structural & molecular biology. 2020 Oct;27(10):967–977.

Published In

Nature structural & molecular biology

DOI

EISSN

1545-9985

ISSN

1545-9993

Publication Date

October 2020

Volume

27

Issue

10

Start / End Page

967 / 977

Related Subject Headings

  • Transcriptome
  • Trans-Activators
  • Spermatozoa
  • Spermatogenesis
  • Rodentia
  • Repetitive Sequences, Nucleic Acid
  • Proto-Oncogene Proteins c-myb
  • Mutation
  • Mitosis
  • Mice, Transgenic