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Optimal Experiment Design for Magnetic Resonance Fingerprinting: Cramér-Rao Bound Meets Spin Dynamics.

Publication ,  Journal Article
Bo Zhao; Haldar, JP; Congyu Liao; Dan Ma; Yun Jiang; Griswold, MA; Setsompop, K; Wald, LL
Published in: IEEE Trans Med Imaging
March 2019

Magnetic resonance (MR) fingerprinting is a new quantitative imaging paradigm, which simultaneously acquires multiple MR tissue parameter maps in a single experiment. In this paper, we present an estimation-theoretic framework to perform experiment design for MR fingerprinting. Specifically, we describe a discrete-time dynamic system to model spin dynamics, and derive an estimation-theoretic bound, i.e., the Cramér-Rao bound, to characterize the signal-to-noise ratio (SNR) efficiency of an MR fingerprinting experiment. We then formulate an optimal experiment design problem, which determines a sequence of acquisition parameters to encode MR tissue parameters with the maximal SNR efficiency, while respecting the physical constraints and other constraints from the image decoding/reconstruction process. We evaluate the performance of the proposed approach with numerical simulations, phantom experiments, and in vivo experiments. We demonstrate that the optimized experiments substantially reduce data acquisition time and/or improve parameter estimation. For example, the optimized experiments achieve about a factor of two improvement in the accuracy of T2 maps, while keeping similar or slightly better accuracy of T1 maps. Finally, as a remarkable observation, we find that the sequence of optimized acquisition parameters appears to be highly structured rather than randomly/pseudo-randomly varying as is prescribed in the conventional MR fingerprinting experiments.

Duke Scholars

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Published In

IEEE Trans Med Imaging

DOI

EISSN

1558-254X

Publication Date

March 2019

Volume

38

Issue

3

Start / End Page

844 / 861

Location

United States

Related Subject Headings

  • Signal-To-Noise Ratio
  • Nuclear Medicine & Medical Imaging
  • Magnetic Resonance Imaging
  • Likelihood Functions
  • Image Processing, Computer-Assisted
  • Humans
  • Brain
  • 46 Information and computing sciences
  • 40 Engineering
  • 09 Engineering
 

Citation

APA
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MLA
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Bo Zhao, Haldar, J. P., Congyu Liao, Dan Ma, Yun Jiang, Griswold, M. A., … Wald, L. L. (2019). Optimal Experiment Design for Magnetic Resonance Fingerprinting: Cramér-Rao Bound Meets Spin Dynamics. IEEE Trans Med Imaging, 38(3), 844–861. https://doi.org/10.1109/TMI.2018.2873704
Bo Zhao, Justin P. Haldar, Congyu Liao, Dan Ma, Yun Jiang, Mark A. Griswold, Kawin Setsompop, and Lawrence L. Wald. “Optimal Experiment Design for Magnetic Resonance Fingerprinting: Cramér-Rao Bound Meets Spin Dynamics.IEEE Trans Med Imaging 38, no. 3 (March 2019): 844–61. https://doi.org/10.1109/TMI.2018.2873704.
Bo Zhao, Haldar JP, Congyu Liao, Dan Ma, Yun Jiang, Griswold MA, et al. Optimal Experiment Design for Magnetic Resonance Fingerprinting: Cramér-Rao Bound Meets Spin Dynamics. IEEE Trans Med Imaging. 2019 Mar;38(3):844–61.
Bo Zhao, et al. “Optimal Experiment Design for Magnetic Resonance Fingerprinting: Cramér-Rao Bound Meets Spin Dynamics.IEEE Trans Med Imaging, vol. 38, no. 3, Mar. 2019, pp. 844–61. Pubmed, doi:10.1109/TMI.2018.2873704.
Bo Zhao, Haldar JP, Congyu Liao, Dan Ma, Yun Jiang, Griswold MA, Setsompop K, Wald LL. Optimal Experiment Design for Magnetic Resonance Fingerprinting: Cramér-Rao Bound Meets Spin Dynamics. IEEE Trans Med Imaging. 2019 Mar;38(3):844–861.

Published In

IEEE Trans Med Imaging

DOI

EISSN

1558-254X

Publication Date

March 2019

Volume

38

Issue

3

Start / End Page

844 / 861

Location

United States

Related Subject Headings

  • Signal-To-Noise Ratio
  • Nuclear Medicine & Medical Imaging
  • Magnetic Resonance Imaging
  • Likelihood Functions
  • Image Processing, Computer-Assisted
  • Humans
  • Brain
  • 46 Information and computing sciences
  • 40 Engineering
  • 09 Engineering