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Open Access Dataset and Common Data Model for Pulse Oximeter Performance Data.

Publication ,  Journal Article
Fong, N; Lipnick, MS; Behnke, E; Chou, Y; Elmankabadi, S; Ortiz, L; Almond, CS; Auchus, I; Burnett, GW; Bisegerwa, R; Conrad, DR; Hooli, S ...
Published in: Sci Data
April 3, 2025

The OpenOximetry Dataset stores clinical and lab pulse oximetry data. It supports measurements of arterial oxygen saturation (SaO2) by arterial blood gas co-oximetry and pulse oximetry (SpO2), alongside processed and unprocessed photoplethysmography (PPG) data and other metadata. This includes skin color measurements, finger diameter, vital signs (e.g., arterial blood pressure, end-tidal carbon dioxide), and arterial blood gas parameters (e.g., acid-base balance, hemoglobin concentration). All data, from desaturation studies to clinical trials, are collected prospectively to ensure accuracy. A common data model and standardized protocols for consistent archival and interpretation ensure consistent data archival and interpretation. The dataset aims to facilitate research on pulse oximeter performance across diverse human characteristics, addressing performance issues and promoting accurate pulse oximeters. The initial release includes controlled lab desaturation studies (CLDS), with ongoing updates planned as further data from clinical trials and CLDS become available.

Duke Scholars

Published In

Sci Data

DOI

EISSN

2052-4463

Publication Date

April 3, 2025

Volume

12

Issue

1

Start / End Page

570

Location

England

Related Subject Headings

  • Photoplethysmography
  • Oxygen Saturation
  • Oximetry
  • Humans
 

Citation

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Fong, N., Lipnick, M. S., Behnke, E., Chou, Y., Elmankabadi, S., Ortiz, L., … Law, T. J. (2025). Open Access Dataset and Common Data Model for Pulse Oximeter Performance Data. Sci Data, 12(1), 570. https://doi.org/10.1038/s41597-025-04870-8
Fong, Nicholas, Michael S. Lipnick, Ella Behnke, Yu Chou, Seif Elmankabadi, Lily Ortiz, Christopher S. Almond, et al. “Open Access Dataset and Common Data Model for Pulse Oximeter Performance Data.Sci Data 12, no. 1 (April 3, 2025): 570. https://doi.org/10.1038/s41597-025-04870-8.
Fong N, Lipnick MS, Behnke E, Chou Y, Elmankabadi S, Ortiz L, et al. Open Access Dataset and Common Data Model for Pulse Oximeter Performance Data. Sci Data. 2025 Apr 3;12(1):570.
Fong, Nicholas, et al. “Open Access Dataset and Common Data Model for Pulse Oximeter Performance Data.Sci Data, vol. 12, no. 1, Apr. 2025, p. 570. Pubmed, doi:10.1038/s41597-025-04870-8.
Fong N, Lipnick MS, Behnke E, Chou Y, Elmankabadi S, Ortiz L, Almond CS, Auchus I, Burnett GW, Bisegerwa R, Conrad DR, Hendrickson CM, Hooli S, Kopotic R, Leeb G, Martin D, McCollum ED, Monk EP, Moore KL, Shmuylovich L, Scott JB, Wong A-KI, Zhou T, Pirracchio R, Bickler PE, Feiner J, Law TJ. Open Access Dataset and Common Data Model for Pulse Oximeter Performance Data. Sci Data. 2025 Apr 3;12(1):570.

Published In

Sci Data

DOI

EISSN

2052-4463

Publication Date

April 3, 2025

Volume

12

Issue

1

Start / End Page

570

Location

England

Related Subject Headings

  • Photoplethysmography
  • Oxygen Saturation
  • Oximetry
  • Humans