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Multiscale comparative connectomics.

Publication ,  Journal Article
Gopalakrishnan, V; Chung, J; Bridgeford, E; Pedigo, BD; Arroyo, J; Upchurch, L; Johnson, GA; Wang, N; Park, Y; Priebe, CE; Vogelstein, JT
Published in: Imaging Neurosci (Camb)
2025

The connectome, a map of the structural and/or functional connections in the brain, provides a complex representation of the neurobiological phenotypes on which it supervenes. This information-rich data modality has the potential to transform our understanding of the relationship between patterns in brain connectivity and neurological processes, disorders, and diseases. However, existing computational techniques used to analyze connectomes are often insufficient for interrogating multi-subject connectomics datasets: many current methods are either solely designed to analyze single connectomes or leverage heuristic graph statistics that are unable to capture the complete topology of multiscale connections between brain regions. To enable more rigorous connectomics analysis, we introduce a set of robust and interpretable statistical hypothesis tests motivated by recent theoretical advances in random graph models. These tests facilitate simultaneous analysis of multiple connectomes across different scales of network topology, enabling the robust and reproducible discovery of hierarchical brain structures that vary in relation to phenotypic profiles. In addition to explaining the theoretical foundations and guarantees of our algorithms, we demonstrate their superiority over current state-of-the-art connectomics methods through extensive simulation studies and real-data experiments. Using a set of high-resolution connectomes obtained from genetically distinct mouse strains (including the BTBR mouse-a standard model of autism-and three behavioral wild-types), we illustrate how our methods successfully uncover latent information in multi-subject connectomics data and yield valuable insights into the connective correlates of neurological phenotypes that other methods do not capture. The data and code necessary to reproduce the analyses, simulations, and figures presented in this work are available athttps://github.com/neurodata/MCC.

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Published In

Imaging Neurosci (Camb)

DOI

EISSN

2837-6056

Publication Date

2025

Volume

3

Location

United States
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Gopalakrishnan, V., Chung, J., Bridgeford, E., Pedigo, B. D., Arroyo, J., Upchurch, L., … Vogelstein, J. T. (2025). Multiscale comparative connectomics. Imaging Neurosci (Camb), 3. https://doi.org/10.1162/IMAG.a.2
Gopalakrishnan, Vivek, Jaewon Chung, Eric Bridgeford, Benjamin D. Pedigo, Jesús Arroyo, Lucy Upchurch, G Allan Johnson, et al. “Multiscale comparative connectomics.Imaging Neurosci (Camb) 3 (2025). https://doi.org/10.1162/IMAG.a.2.
Gopalakrishnan V, Chung J, Bridgeford E, Pedigo BD, Arroyo J, Upchurch L, et al. Multiscale comparative connectomics. Imaging Neurosci (Camb). 2025;3.
Gopalakrishnan, Vivek, et al. “Multiscale comparative connectomics.Imaging Neurosci (Camb), vol. 3, 2025. Pubmed, doi:10.1162/IMAG.a.2.
Gopalakrishnan V, Chung J, Bridgeford E, Pedigo BD, Arroyo J, Upchurch L, Johnson GA, Wang N, Park Y, Priebe CE, Vogelstein JT. Multiscale comparative connectomics. Imaging Neurosci (Camb). 2025;3.

Published In

Imaging Neurosci (Camb)

DOI

EISSN

2837-6056

Publication Date

2025

Volume

3

Location

United States