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OMICmAge: An integrative multi-omics approach to quantify biological age with electronic medical records.

Publication ,  Journal Article
Chen, Q; Dwaraka, VB; Carreras-Gallo, N; Mendez, K; Chen, Y; Begum, S; Kachroo, P; Prince, N; Went, H; Mendez, T; Lin, A; Turner, L; Moqri, M ...
Published in: bioRxiv
October 24, 2023

Biological aging is a multifactorial process involving complex interactions of cellular and biochemical processes that is reflected in omic profiles. Using common clinical laboratory measures in ~30,000 individuals from the MGB-Biobank, we developed a robust, predictive biological aging phenotype, EMRAge, that balances clinical biomarkers with overall mortality risk and can be broadly recapitulated across EMRs. We then applied elastic-net regression to model EMRAge with DNA-methylation (DNAm) and multiple omics, generating DNAmEMRAge and OMICmAge, respectively. Both biomarkers demonstrated strong associations with chronic diseases and mortality that outperform current biomarkers across our discovery (MGB-ABC, n=3,451) and validation (TruDiagnostic, n=12,666) cohorts. Through the use of epigenetic biomarker proxies, OMICmAge has the unique advantage of expanding the predictive search space to include epigenomic, proteomic, metabolomic, and clinical data while distilling this in a measure with DNAm alone, providing opportunities to identify clinically-relevant interconnections central to the aging process.

Duke Scholars

Published In

bioRxiv

DOI

EISSN

2692-8205

Publication Date

October 24, 2023

Location

United States
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Chen, Q., Dwaraka, V. B., Carreras-Gallo, N., Mendez, K., Chen, Y., Begum, S., … Lasky-Su, J. A. (2023). OMICmAge: An integrative multi-omics approach to quantify biological age with electronic medical records. BioRxiv. https://doi.org/10.1101/2023.10.16.562114
Chen, Qingwen, Varun B. Dwaraka, Natàlia Carreras-Gallo, Kevin Mendez, Yulu Chen, Sofina Begum, Priyadarshini Kachroo, et al. “OMICmAge: An integrative multi-omics approach to quantify biological age with electronic medical records.BioRxiv, October 24, 2023. https://doi.org/10.1101/2023.10.16.562114.
Chen Q, Dwaraka VB, Carreras-Gallo N, Mendez K, Chen Y, Begum S, et al. OMICmAge: An integrative multi-omics approach to quantify biological age with electronic medical records. bioRxiv. 2023 Oct 24;
Chen, Qingwen, et al. “OMICmAge: An integrative multi-omics approach to quantify biological age with electronic medical records.BioRxiv, Oct. 2023. Pubmed, doi:10.1101/2023.10.16.562114.
Chen Q, Dwaraka VB, Carreras-Gallo N, Mendez K, Chen Y, Begum S, Kachroo P, Prince N, Went H, Mendez T, Lin A, Turner L, Moqri M, Chu SH, Kelly RS, Weiss ST, Rattray NJW, Gladyshev VN, Karlson E, Wheelock C, Mathé EA, Dahlin A, McGeachie MJ, Smith R, Lasky-Su JA. OMICmAge: An integrative multi-omics approach to quantify biological age with electronic medical records. bioRxiv. 2023 Oct 24;

Published In

bioRxiv

DOI

EISSN

2692-8205

Publication Date

October 24, 2023

Location

United States