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The Duke University Cervical Spine MRI Segmentation Dataset (CSpineSeg).

Publication ,  Journal Article
Zhou, L; Wiggins, W; Zhang, J; Colglazier, R; Willhite, J; Dixon, A; Malinzak, M; Gu, H; Mazurowski, MA; Calabrese, E
Published in: Sci Data
October 27, 2025

This work describes a publicly available dataset, the Duke University Cervical Spine MRI Segmentation Dataset (CSpineSeg), consisting of 1,255 cervical spine magnetic resonance imaging (MRI) examinations from 1,232 patients collected from the Duke University Health System. CSpineSeg also includes expert manual semantic segmentations of vertebral bodies and intervertebral discs for 481 patients. This dataset aims to provide a resource for training and evaluation of deep learning segmentation models and facilitate cervical spine research. Along with the dataset, we present a deep learning segmentation model which could be used as a benchmark in cervical spine segmentation tasks. Our segmentation model achieves a Dice Coefficient of 0.916, demonstrating the feasibility of utilizing CSpineSeg to train segmentation models.

Duke Scholars

Published In

Sci Data

DOI

EISSN

2052-4463

Publication Date

October 27, 2025

Volume

12

Issue

1

Start / End Page

1695

Location

England

Related Subject Headings

  • Magnetic Resonance Imaging
  • Image Processing, Computer-Assisted
  • Humans
  • Deep Learning
  • Cervical Vertebrae
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Zhou, L., Wiggins, W., Zhang, J., Colglazier, R., Willhite, J., Dixon, A., … Calabrese, E. (2025). The Duke University Cervical Spine MRI Segmentation Dataset (CSpineSeg). Sci Data, 12(1), 1695. https://doi.org/10.1038/s41597-025-05975-w
Zhou, Longfei, Walter Wiggins, Jikai Zhang, Roy Colglazier, Jay Willhite, Austin Dixon, Michael Malinzak, Hanxue Gu, Maciej A. Mazurowski, and Evan Calabrese. “The Duke University Cervical Spine MRI Segmentation Dataset (CSpineSeg).Sci Data 12, no. 1 (October 27, 2025): 1695. https://doi.org/10.1038/s41597-025-05975-w.
Zhou L, Wiggins W, Zhang J, Colglazier R, Willhite J, Dixon A, et al. The Duke University Cervical Spine MRI Segmentation Dataset (CSpineSeg). Sci Data. 2025 Oct 27;12(1):1695.
Zhou, Longfei, et al. “The Duke University Cervical Spine MRI Segmentation Dataset (CSpineSeg).Sci Data, vol. 12, no. 1, Oct. 2025, p. 1695. Pubmed, doi:10.1038/s41597-025-05975-w.
Zhou L, Wiggins W, Zhang J, Colglazier R, Willhite J, Dixon A, Malinzak M, Gu H, Mazurowski MA, Calabrese E. The Duke University Cervical Spine MRI Segmentation Dataset (CSpineSeg). Sci Data. 2025 Oct 27;12(1):1695.

Published In

Sci Data

DOI

EISSN

2052-4463

Publication Date

October 27, 2025

Volume

12

Issue

1

Start / End Page

1695

Location

England

Related Subject Headings

  • Magnetic Resonance Imaging
  • Image Processing, Computer-Assisted
  • Humans
  • Deep Learning
  • Cervical Vertebrae