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Expression pattern and prognostic significance of CDKs in breast cancer: An integrated bioinformatic study.

Publication ,  Journal Article
Mehraj, U; Sofi, S; Alshehri, B; Mir, MA
Published in: Cancer biomarkers : section A of Disease markers
January 2022

Globally, breast cancer (BC) has become one of the most prevalent malignancies and the leading cause of tumor-related deaths among women. Dysregulation of the cell cycle is a well-known hallmark of cancer development and metastasis. CDKs are essential components of the cell-cycle regulatory system with aberrant expression in a variety of cancers, including BC. In the development of targeted cancer treatment, reestablishing the regulation of the cell cycle by modulation of CDKs has emerged as a promising approach.Herein, we used a bioinformatic approach to assess the expression pattern, prognostic and diagnostic importance, and clinical relevance of CDKs in BC. Additionally, we conducted a functional enrichment analysis of deregulated CDKs using the STRING and KEGG databases to delineate the role of CDKs in breast tumorigenesis.Gene expression analysis revealed substantial deregulation of CDKs in BC, with CDK1, CDK11A, and CDK18 showing a fold change of >± 1.5. Also, metastatic tumors showed high expression of CDK1 in the single cell RNA sequencing analysis of primary and metastatic breast tumors. Additionally, it was found that dysregulated CDK expression affects overall survival (OS) and relapse-free survival (RFS) of BC patients.The study's multimodal analytical methodologies imply that modulating CDKs for BC treatment is a promising approach.

Duke Scholars

Published In

Cancer biomarkers : section A of Disease markers

DOI

EISSN

1875-8592

ISSN

1574-0153

Publication Date

January 2022

Volume

34

Issue

3

Start / End Page

505 / 519

Related Subject Headings

  • Prognosis
  • Oncology & Carcinogenesis
  • Neoplasm Recurrence, Local
  • Humans
  • Female
  • Cyclin-Dependent Kinases
  • Computational Biology
  • Breast Neoplasms
 

Citation

APA
Chicago
ICMJE
MLA
NLM
Mehraj, U., Sofi, S., Alshehri, B., & Mir, M. A. (2022). Expression pattern and prognostic significance of CDKs in breast cancer: An integrated bioinformatic study. Cancer Biomarkers : Section A of Disease Markers, 34(3), 505–519. https://doi.org/10.3233/cbm-210186
Mehraj, Umar, Shazia Sofi, Bader Alshehri, and Manzoor A. Mir. “Expression pattern and prognostic significance of CDKs in breast cancer: An integrated bioinformatic study.Cancer Biomarkers : Section A of Disease Markers 34, no. 3 (January 2022): 505–19. https://doi.org/10.3233/cbm-210186.
Mehraj U, Sofi S, Alshehri B, Mir MA. Expression pattern and prognostic significance of CDKs in breast cancer: An integrated bioinformatic study. Cancer biomarkers : section A of Disease markers. 2022 Jan;34(3):505–19.
Mehraj, Umar, et al. “Expression pattern and prognostic significance of CDKs in breast cancer: An integrated bioinformatic study.Cancer Biomarkers : Section A of Disease Markers, vol. 34, no. 3, Jan. 2022, pp. 505–19. Epmc, doi:10.3233/cbm-210186.
Mehraj U, Sofi S, Alshehri B, Mir MA. Expression pattern and prognostic significance of CDKs in breast cancer: An integrated bioinformatic study. Cancer biomarkers : section A of Disease markers. 2022 Jan;34(3):505–519.

Published In

Cancer biomarkers : section A of Disease markers

DOI

EISSN

1875-8592

ISSN

1574-0153

Publication Date

January 2022

Volume

34

Issue

3

Start / End Page

505 / 519

Related Subject Headings

  • Prognosis
  • Oncology & Carcinogenesis
  • Neoplasm Recurrence, Local
  • Humans
  • Female
  • Cyclin-Dependent Kinases
  • Computational Biology
  • Breast Neoplasms